Award: OCE-1652320

Award Title: CAREER: Linking genetic diversity, population density, and disease prevalence in seagrass and oyster ecosystems
Funding Source: NSF Division of Ocean Sciences (NSF OCE)
Program Manager: Michael E. Sieracki

Outcomes Report

Overview: Disease outbreaks in the ocean are increasing, causing losses of ecologically important marine species, but the factors contributing to these outbreaks are not well understood. This project examined the relationships among genetic diversity, disease prevalence and intensity, and restoration success in two marine foundation species the seagrass Zostera marina and the Eastern oyster Crassostrea virginica. The project paired large-scale, experimental restorations and smaller-scale experiments to document both patterns and mechanisms. The experiments were co-designed with restoration practitioners and resource managers and guided by the knowledge and input of other key stakeholder groups (e.g. oyster growers, environmental organizations) in an iterative process. Graduate and undergraduate students were involved in all phases of the project, from experimental design to sample processing with state-of-the-art molecular techniques to surveys and workshops with project partners to the development of educational games to share our results. Intellectual Merit: The relationship between host genetic diversity and disease dynamics is complex. In some cases, known as a dilution effect, diversity reduces disease transmission and risk. However, the opposite relationship, known as the amplification effect, can also occur when diversity increases the risk of infection. This project provided some of the first tests of these diversity-disease relationships in marine organisms. In seagrasses, a controlled experiment revealed evidence for a dilution effect, with reduced disease intensity with greater plant genetic diversity. This benefit only occurred at elevated temperatures, suggesting the benefits of diversity may increase with climate change. A cross-ocean survey confirmed the importance of both temperature and seagrass traits for disease prevalence. In addition, a negative relationship between seagrass genetic diversity and disease prevalence in the Atlantic Ocean provided additional evidence for a dilution effect. In contrast, a large-scale experimental seagrass restoration generated some evidence for amplification: areas restored with plants from multiple source sites had greater cover, and they also had slightly higher disease prevalence. Overall, this work confirmed the key role of seagrass genetic diversity for both plant productivity and disease dynamics. With oysters, three experimental oyster reef restoration projects created for this project have expanded understanding of linkages among oyster genetic identity and diversity, parasite community prevalence and intensity, and restoration success. For example, genetic identity of the oysters used to seed experimental reefs was a strong and consistent determinant of parasite community structure on those reefs for four years post restoration. Oyster survival through time also varied by genetic identity, likely due to variation in disease and predator susceptibility, demonstrating the importance of evolutionary processes such as selection on ecological time scales. These projects highlight the importance of source selection for oyster restoration success, and suggest that using a diverse suite of sources may increase the chances of success. Broader Impacts: Working with partners to co-develop experimental restorations in two marine foundation species, as well as in additional complementary species during the project period, promoted information exchange and relationship building among scientists, practitioners, and managers, helping to identify, to characterize, and to close the science-practice gap in coastal habitat restoration. Further, these relationships informed a synthesis paper of best practices for climate adaptive restoration efforts across systems. The project also used a tiered-mentoring program to train undergraduate, Masters, PhD students, and postdoctoral researchers in field experimentation, molecular analyses, and social science approaches. Research findings were also incorporated into undergraduate courses in Conservation Biology and Foundations in Ecology and Evolution. Last Modified: 04/04/2024 Submitted by: RandallHughes
DatasetLatest Version DateCurrent State
Database of published habitat restoration studies from 1995, 2005, and 20152018-09-04Final no updates expected
DNA microsatellite alleles for hatchery-produced oyster cohorts2019-06-06Final no updates expected
Performance traits (e.g., survival, growth, size) for hatchery-produced oyster cohorts2019-06-07Final no updates expected
Database of oyster mortality based on body size treatment2020-03-02Final no updates expected
An archive of the fish and inveterate data from the Rhode Island Department of Environmental Management (RIDEM) juvenile fin-fish survey across 6 Rhode Island salt ponds from 2010-20152020-03-03Final no updates expected
Coastal habitat restoration survey2020-11-20Final no updates expected
Database summarizing independent studies of nekton taxa associated with oyster reefs2021-03-23Final no updates expected
Seagrass responses to Labyrinthula zosterae inoculation base on a subpopulation from mesocosm experiments conducted in Nahant, Massachusetts2021-05-04Final no updates expected
Seawater temperature and salinity of mesocosms and a field location collected while conducting experiments on seagrass in Nahant, Massachusetts2021-05-04Final no updates expected
Wasting disease prevalence and severity and seagrass length and density based on subpopulations of Zostera marina on the North Shore of Massachusetts surveyed in July and September 20162021-05-04Final no updates expected
The implications of functional trait variation from fish sampled in Rhode Island salt ponds from June to October 20182025-02-16Final no updates expected
Seagrass metrics from from seagrass wasting disease mesocosm experiments conducted at Bodega Marine Laboratory from July-September 20152022-10-06Final no updates expected
Oyster density of restored reef edge/interior in Quonochontaug Pond, RI in May 20192022-11-02Final no updates expected
Faunal ID, size and biomass on oyster reefs in Quonochontaug Pond, RI from July-August 2018 and September-October 20182022-11-02Final no updates expected
Daily temperature measurements on restored oyster reefs in Quonochontaug Pond, RI from July-August 2018 and September-October 20182022-11-01Final no updates expected
Temperature from seagrass wasting disease mesocosm experiments at Bodega Marine Laboratory in June-July 20152022-10-27Final no updates expected
Quantitative PCR cell count estimates from samples of DNA extracted from seagrass wasting disease parasite, Labyrinthula zosterae from wasting disease mesocosm experiments at Bodega Marine Laboratory in July-Sept of 20152022-10-27Final no updates expected
Microbial taxa (amplicon sequence variant or ASV) statistical analyses for two seagrass genotypes from wasting disease mesocosm experiments at Bodega Marine Laboratory in July-Sept of 20152022-10-27Final no updates expected
Prevalence and intensity of oyster parasite species following a reef restoration experiment in Quonochontaug Pond, Rhode Island, USA from 2017-20202022-11-10Final no updates expected

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Principal Investigator: Randall Hughes (Northeastern University)