Dataset: Microbial Counts - Eukaryote
Deployment: IronExII_MV

Microbial counts - Eukaryote

Principal Investigator:

Kenneth H. Coale (Moss Landing Marine Laboratories, MLML)

Co-Principal Investigator:

Ken Johnson (Moss Landing Marine Laboratories, MLML)

Contact:

Evelyn Armstrong (University of Otago)

BCO-DMO Data Manager:

Stephen R. Gegg (Woods Hole Oceanographic Institution, WHOI BCO-DMO)

Project:

Iron Experiment II (IronExII)

Current State:

Final no updates expected

Version:

10 March 2011

Version Date:

2011-03-10

Data URL:

https://www.bco-dmo.org/dataset-deployment/454443/data

Expand/Collapse All

Description

Microbial counts - Eukaryote

Data were normalized with the following values:

#  values used for normalizing from "out" by group
#  group    fals(rel)   redFL(rel)   FL/fals ratio
#  group1   0.45        0.64         1.58
#  group2   2.55        9.01         3.57
#  group3   0.33        7.94         27.74
#  group4   nd          nd           nd
#

Methods & Sampling

Dataset acquisition description

Data Processing Description

Dataset Processing Description

BCO-DMO Processing Notes
Prepared by WHOI OCB-DMO from original multi sheet file :FeEx2_summary01-(c).xls contributed by Doug Mackie

Sheets "euk data", IN (euk), OUT (euk), IN (euk-norm), OUT (euk_norm) used to prepare this dataset.

Changes made to original file:
- Data from the 5 individual sheets combined into one
- Parameter names extensively edited/modified to conform to BCO-DMO convention
- date manually inserted from Cast Log

- HHMM time calculated from supplied decimal hours

More information about this dataset deployment

Funding

Award Number	Funding Source
N00014-94-10125	Office of Naval Research
OCE-9217518	NSF Division of Ocean Sciences

Instruments

CTD - profiler

Supplied Name: CTD profiler

Supplied Description:

Instrument Type

Generic Name: CTD - profiler

Community Identifier: http://vocab.nerc.ac.uk/collection/L05/current/130/

Generic Description:

The Conductivity, Temperature, Depth (CTD) unit is an integrated instrument package designed to measure the conductivity, temperature, and pressure (depth) of the water column. The instrument is lowered via cable through the water column. It permits scientists to observe the physical properties in real-time via a conducting cable, which is typically connected to a CTD to a deck unit and computer on a ship. The CTD is often configured with additional optional sensors including fluorometers, transmissometers and/or radiometers. It is often combined with a Rosette of water sampling bottles (e.g. Niskin, GO-FLO) for collecting discrete water samples during the cast.

This term applies to profiling CTDs. For fixed CTDs, see https://www.bco-dmo.org/instrument/869934.

Parameters

Supplied Name	Supplied description	Supplied Units	Standard Name
filename	filename	text	no_bcodmo_term
description	description	text	no_bcodmo_term
cruise	cruise	text	no_bcodmo_term
experiment	experiment	text	no_bcodmo_term
date	date (GMT)	yyyymmdd	date
time	time (GMT)	hhmm	time
time_decimal	time decimal (GMT)	decimal hours	no_bcodmo_term
yrday	yrday	integer	yrday
lon	Longitude (West is negative)	decimal degrees	lon
lat	Latitude (South is negative)	decimal degrees	lat
cast	cast	integer	cast
depth	depth	meters	depth
Patch	Location relative to the Patch	text	no_bcodmo_term
experiment_day	experiment day	integer	no_bcodmo_term
time_of_day	time of day relative to daylight	text	time_of_day
beads_to_Fals	beads to Fals	ratio	no_bcodmo_term
redFL	redFL	(tbd)	no_bcodmo_term
group1_name	group1 name	text	no_bcodmo_term
group1_conc	group1 conc	cells/ml	no_bcodmo_term
group1_conc_mean	group1 conc mean	cells/ml	no_bcodmo_term
group1_conc_stddev	group1 conc stddev	cells/ml	no_bcodmo_term
group1_fals	group1 fals	relative	no_bcodmo_term
group1_redFL	group1 redFL	relative	no_bcodmo_term
group1_redFL_to_fals_ratio	group1 redFL to fals ratio	ratio	no_bcodmo_term
group1_fals_norm	group1 fals norm	(tbd)	no_bcodmo_term
group1_fals_norm_mean	group1 fals norm mean	(tbd)	no_bcodmo_term
group1_fals_norm_stddev	group1 fals norm stddev	(tbd)	no_bcodmo_term
group1_redFL_norm	group1 redFL norm	(tbd)	no_bcodmo_term
group1_redFL_norm_mean	group1 redFL norm mean	(tbd)	no_bcodmo_term
group1_redFL_norm_stddev	group1 redFL norm stddev	(tbd)	no_bcodmo_term
group1_redFL_norm_to_fals_norm_ratio	group1 redFL norm to fals norm ratio	ratio	no_bcodmo_term
group1_redFL_norm_to_fals_norm_ratio_mean	group1 redFL norm to fals norm ratio mean	(tbd)	no_bcodmo_term
group1_redFL_norm_to_fals_norm_ratio_stddev	group1 redFL norm to fals norm ratio stddev	(tbd)	no_bcodmo_term
group2_name	group2 name	text	no_bcodmo_term
group2_conc	group2 conc	cells/ml	no_bcodmo_term
group2_conc_mean	group2 conc mean	cells/ml	no_bcodmo_term
group2_conc_stddev	group2 conc stddev	cells/ml	no_bcodmo_term
group2_fals	group2 fals	relative	no_bcodmo_term
group2_redFL	group2 redFL	relative	no_bcodmo_term
group2_redFL_to_fals_ratio	group2 redFL to fals ratio	ratio	no_bcodmo_term
group2_fals_norm	group2 fals norm	(tbd)	no_bcodmo_term
group2_fals_norm_mean	group2 fals norm mean	(tbd)	no_bcodmo_term
group2_fals_norm_stddev	group2 fals norm stddev	(tbd)	no_bcodmo_term
group2_redFL_norm	group2 redFL norm	(tbd)	no_bcodmo_term
group2_redFL_norm_mean	group2 redFL norm mean	(tbd)	no_bcodmo_term
group2_redFL_norm_stddev	group2 redFL norm stddev	(tbd)	no_bcodmo_term
group2_redFL_norm_to_fals_norm_ratio	group2 redFL norm to fals norm ratio	(tbd)	no_bcodmo_term
group2_redFL_norm_to_fals_norm_ratio_mean	group2 redFL norm to fals norm ratio mean	(tbd)	no_bcodmo_term
group2_redFL_norm_to_fals_norm_ratio_stddev	group2 redFL norm to fals norm ratio stddev	(tbd)	no_bcodmo_term
group3_name	group3 name	text	no_bcodmo_term
group3_conc	group3 conc	cells/ml	no_bcodmo_term
group3_conc_mean	group3 conc mean	cells/ml	no_bcodmo_term
group3_conc_stddev	group3 conc stddev	cells/ml	no_bcodmo_term
group3_fals	group3 fals	relative	no_bcodmo_term
group3_redFL	group3 redFL	relative	no_bcodmo_term
group3_redFL_to_fals_ratio	group3 redFL to fals ratio	ratio	no_bcodmo_term
group3_fals_norm	group3 fals norm	(tbd)	no_bcodmo_term
group3_fals_norm_mean	group3 fals norm mean	(tbd)	no_bcodmo_term
group3_fals_norm_stddev	group3 fals norm stddev	(tbd)	no_bcodmo_term
group3_redFL_norm	group3 redFL norm	(tbd)	no_bcodmo_term
group3_redFL_norm_mean	group3 redFL norm mean	(tbd)	no_bcodmo_term
group3_redFL_norm_stddev	group3 redFL norm stddev	(tbd)	no_bcodmo_term
group3_redFL_norm_to_fals_norm_ratio	group3 redFL norm to fals norm ratio	(tbd)	no_bcodmo_term
group3_redFL_norm_to_fals_norm_ratio_mean	group3 redFL norm to fals norm ratio mean	(tbd)	no_bcodmo_term
group3_redFL_norm_to_fals_norm_ratio_stddev	group3 redFL norm to fals norm ratio stddev	(tbd)	no_bcodmo_term
group4_name	group4 name	text	no_bcodmo_term
group4_conc	group4 conc	cells/ml	no_bcodmo_term
group4_conc_mean	group4 conc mean	cells/ml	no_bcodmo_term
group4_conc_stddev	group4 conc stddev	cells/ml	no_bcodmo_term
group4_fals	group4 fals	relative	no_bcodmo_term
group4_reducedred	group4 reducedred	relative to red	no_bcodmo_term
group4_redFL_to_fals_ratio	group4 redFL to fals ratio	ratio	no_bcodmo_term
group4_fals_norm	group4 fals norm	(tbd)	no_bcodmo_term
group4_fals_norm_mean	group4 fals norm mean	(tbd)	no_bcodmo_term
group4_fals_norm_stddev	group4 fals norm stddev	(tbd)	no_bcodmo_term
group4_redFL_norm	group4 redFL norm	(tbd)	no_bcodmo_term
group4_redFL_norm_mean	group4 redFL norm mean	(tbd)	no_bcodmo_term
group4_redFL_norm_stddev	group4 redFL norm stddev	(tbd)	no_bcodmo_term
group4_redFL_norm_to_fals_norm_ratio	group4 redFL norm to fals norm ratio	(tbd)	no_bcodmo_term
group4_redFL_norm_to_fals_norm_ratio_mean	group4 redFL norm to fals norm ratio mean	(tbd)	no_bcodmo_term
group4_redFL_norm_to_fals_norm_ratio_stddev	group4 redFL norm to fals norm ratio stddev	(tbd)	no_bcodmo_term

Database

Contribute Data

Dataset: Microbial Counts - Eukaryote
Deployment: IronExII_MV

Dataset acquisition description

Dataset Processing Description

Database

Contribute Data

Dataset: Microbial Counts - EukaryoteDeployment: IronExII_MV

Dataset acquisition description

Dataset Processing Description

Dataset: Microbial Counts - Eukaryote
Deployment: IronExII_MV