Dataset: T_pseudonana_growth
Deployment: lab_Kustka_Allen

T. pseudonana growth under varied Zn, Mn, Cu availability.

Principal Investigator:

Andrew E. Allen (J. Craig Venter Institute, JCVI)

Contact:

Adam Kustka (Rutgers University)

BCO-DMO Data Manager:

Shannon Rauch (Woods Hole Oceanographic Institution, WHOI BCO-DMO)

Project:

Current State:

Final no updates expected

Version:

28 June 2012

Version Date:

2012-06-28

Data URL:

Description

Results of metal limitation experiments (Cu, Zn, Fe, Mn) conducted in the diatom T. pseudonana.

Methods & Sampling

Data Processing Description

PI-provided parameter names were modified to conform with BCO-DMO conventions.

More information about this dataset deployment

Funding

Award Number	Funding Source
OCE-0727997	NSF Division of Ocean Sciences

Instruments

None available yet

Parameters

Supplied Name	Supplied description	Supplied Units	Standard Name
sample	Vial sample numbers (unique ID's).	dimensionless	sample
metal	Metal of interest.	dimensionless	no_bcodmo_term
condition	Condition of the metal of interest under which the experiment was carried out.	dimensionless	no_bcodmo_term
growth_rate	Cell specific growth rate (per day), calculated as the slope of the linear regression between ln (cell density) versus time.	ln(cell density)/day	no_bcodmo_term
growth_rate_se	Standard error of growth_rate.	dimensionless	no_bcodmo_term
p_fe_prime	The negative log of fe_prime concentration (which is the summed concentration of all Fe species not complexed to EDTA). The additional effect of photochemistry of FeEDTA complexes on calculating fe_prime_log was considered. Originally notated as pFe'.	dimensionless	no_bcodmo_term
p_cu_prime	The negative log of Cu prime concentration (which is the summed concentration of all Cu species not complexed to either EDTA or TETA). Originally notated as pCu'.	dimensionless	no_bcodmo_term
p_mn_prime	The negative log of the Mn prime concentration (which is the summed concentration of all Mn species not complexed to EDTA). Originally notated as pMn'.	dimensionless	no_bcodmo_term
p_zn_prime	The negative log of the Zn prime concentration (which is the summed concentration of all Zn species not complexed to EDTA). Originally notated as pZn'.	dimensionless	no_bcodmo_term

Database