Dataset: Water Column Chemical and Biological Inventories
Deployment: ArcticNitro_Barrow

Water Column Chemical and Biological Inventories

Principal Investigator:

Patricia L. Yager (University of Georgia, UGA)

Co-Principal Investigator:

Deborah A. Bronk (Virginia Institute of Marine Science, VIMS)

Marc E. Frischer (Skidaway Institute of Oceanography, SkIO)

Rachel E. Sipler (Virginia Institute of Marine Science, VIMS)

Contact:

Patricia L. Yager (University of Georgia, UGA)

Data Manager:

Mrs Marta P. Sanderson (Virginia Institute of Marine Science, VIMS)

BCO-DMO Data Manager:

Stephen R. Gegg (Woods Hole Oceanographic Institution, WHOI BCO-DMO)

Project:

Does competition for nitrogen between autotrophs and heterotrophs control carbon fluxes in the western coastal Arctic? (ArcticNITRO)

Current State:

Preliminary and in progress

Version:

07 May 2015

Version Date:

2015-05-07

Data URL:

https://www.bco-dmo.org/dataset-deployment/535729/data

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Description

Water Column Chemical and Biological Inventories

AMBIENT = Water column inventories

Methods & Sampling

Dataset acquisition description

(tbd)

Data Processing Description

Dataset Processing Description

BCO-DMO Processing Notes
- Generated from original file "ARCTICNITRO_MasterlDataReport.xlsx, sheet: "Ambient" contributed by Patricia Yager
- Date reformatted to YYYYMMDD
- Lat/Lon degs, mins, secs converted to decimal degrees
- Parameter names edited to conform to BCO-DMO naming convention found at Choosing Parameter Name
- "nd" (no data) inserted into blank cells

More information about this dataset deployment

Funding

Award Number	Funding Source
PLR-0909647	NSF Arctic Sciences
PLR-0909839	NSF Arctic Sciences
PLR-0910252	NSF Arctic Sciences

Instruments

None available yet

Parameters

Supplied Name	Supplied description	Supplied Units	Standard Name
Year	Collection Year	YYYY	year
Station_ID	Location of sample collection (name)	text	station
Date	Date of sample collection (local Alaska time)	YYYYMMDD	date_local
Latitude	Latitude of sample collection	decimal degrees	lat
Longitude	Longitude of sample collection	decimal degrees	lon
Water_Depth	Station Water Depth	meters	depth_w
Ice_Thickness	Ice Thickness	meters	ice_thickness
Snow_Thickness	Snow Thickness	centimeters	snow_thickness
Surface_Water_Temp	Surface Water Temp	degrees Celsius	SST
Sample_ID	Sample Unique Identifier	text	sample
Sample_Depth	Sample Depth	meters	depth
CTD_Water_Temperature	CTD Water Temperature	degrees Celsius	temp
CTD_Salinity	CTD Salinity	PSU	sal
CTD_Dissolved_Oxygen	Water column dissolved oxygen from CTD depth profile	mg/l	O2
CTD_Dissolved_Oxygen_Saturation	Water column % oxygen saturation from CTD depth profile	percentage	O2_sat_pcnt
CTD_pH	Water column pH from CTD depth profile	pH Units	pH
CTD_Relative_Turbidity	Water column turbidity from CTD depth profile	NTU	turbidity
CTD_Chla_Fluorescense	Fluorometer from CTD depth profile	umol C/L	fluor
Ambient_Total_Dissolved_Nitrogen	Water column total dissolved nitrogen	umol N/L	TDN
Ambient_Total_Dissolved_Nitrogen_SD	Water column total dissolved nitrogen SD	dimensionless	std_dev
Ambient_Ammonium	Water column NH4 concentration	umol N/L	NH4
Ambient_Ammonium_SD	Water column NH4 concentration SD	dimensionless	std_dev
Ambient_Nitrite	Water column NO2 concentration	umol N/L	NO2
Ambient_Nitrite_SD	Water column NO2 concentration SD	dimensionless	std_dev
Ambient_Nitrate	Water column NO3 concentration	umol N/L	NO3
Ambient_Nitrate_SD	Water column NO3 concentration SD	dimensionless	std_dev
Ambient_Dissolved_Organic_Nitrogen	Water column total dissolved organic nitrogen	umol N/L	DON
Ambient_Dissolved_Organic_Nitrogen_SD	Water column total dissolved organic nitrogen SD	dimensionless	std_dev
Ambient_Urea	Water column urea concentration	umol N/L	Urea
Ambient_Urea_SD	Water column urea concentration SD	dimensionless	std_dev
Ambient_Dissolved_Primary_Amines	Water column dissolved primary amine	umol N/L	no_bcodmo_term
Ambient_Dissolved_Primary_Amines_SD	Water column dissolved primary amine SD	dimensionless	std_dev
Ambient_Dissolved_Organic_Carbon	Water column dissolved organic carbon	umol C/L	DOC
Ambient_Dissolved_Organic_Carbon_SD	Water column dissolved organic carbon SD	dimensionless	std_dev
Ambient_Phosphate	Water column PO4 concentration	umol P/L	PO4
Ambient_Phosphate_SD	Water column PO4 concentration SD	dimensionless	std_dev
Ambient_Silicate	Water column Si concentration	umol Si/L	SiO4
Ambient_Silicate_SD	Water column Si concentration SD	dimensionless	std_dev
Total_Dissolved_Phosphate	Water column dissolved phosphorous	umol P/L	DIP
Total_Dissolved_Phosphate_SD	Water column dissolved phosphorous SD	dimensionless	std_dev
Dissolved_Organic_Phosphate	Water column dissolved organic phosphorous	umol P/L	DOP
Chlorophyll_a	Chl a concentration	ug/L	chl_a
Chlorophyll_a_SD	Chl a concentration SD	dimensionless	std_dev
Bacterial_Abundance	Flow cytometer counts using CYBR gold	cells/mL	bact_abund
Bacterial_Abundance_SE	Flow cytometer counts using CYBR gold SE	dimensionless	std_err
AVE_Bacterial_Production	Leucine incorporation rates per liter per hour	pmol Leu / L / h	leuc_incorp
AVE_Bacterial_Production_SD	Leucine incorporation rates per liter per hour SD	dimensionless	std_dev
Whole_Community_Respiration	Whole community respiration from time series increases in DIC	umol O L-1 hr-1	C14_respir
nasA_gene_abundance	Gene abundance of bacterial nitrate reducase genes	gene copy L-1	abundance
nasA_gene_abundance_SD	Gene abundance of bacterial nitrate reducase genes SD	dimensionless	std_dev
nasA_transcript_abundance	Normalized gene expression rates of bacterial nitrate reductase	transcript copy/ng total RNA L-1	abundance

Database

Contribute Data

Dataset: Water Column Chemical and Biological Inventories
Deployment: ArcticNitro_Barrow

Dataset acquisition description

Dataset Processing Description

Database

Contribute Data

Dataset: Water Column Chemical and Biological InventoriesDeployment: ArcticNitro_Barrow

Dataset acquisition description

Dataset Processing Description

Dataset: Water Column Chemical and Biological Inventories
Deployment: ArcticNitro_Barrow