Dataset: Sequence accessions: archaeal and bacterial clone libraries
Deployment: AT15-56

Sequence accession numbers for archaeal and bacterial clone libraries from Guaymas Basin sediments

Principal Investigator:

Andreas Teske (University of North Carolina at Chapel Hill, UNC-Chapel Hill)

Student:

Luke McKay (University of Montana)

BCO-DMO Data Manager:

Shannon Rauch (Woods Hole Oceanographic Institution, WHOI BCO-DMO)

Project:

Constraints on microbial biogeography in hydrothermally active sediments of Guaymas Basin: Energetic limits, physical stressors, and upward compression of metabolic zones (Microbial Biogeo Guaymas)

Current State:

Final no updates expected

Version:

10 Aug 2016

Version Date:

2016-08-10

Data URL:

https://www.bco-dmo.org/dataset-deployment/653702/data

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Description

Sequence accession numbers for archaeal and bacterial clone libraries from Guaymas Basin hydrothermal sediments (2000 m depth) collected on R/V Atlantis cruise, AT15-56.

Methods & Sampling

Dataset acquisition description

Hydrothermal sediments were sampled using HOV Alvin.

For complete acquisition and processing details, refer to:
McKay, L., et al. 2016. Thermal and geochemical influences on microbial biogeography in the hydrothermal sediments of Guaymas Basin, Gulf of California. Environmental Microbiology Reports, 8(1), 150-161. doi:10.1111/1758-2229.12365

Data Processing Description

Dataset Processing Description

More information about this dataset deployment

Funding

Award Number	Funding Source
OCE-0647633	NSF Division of Ocean Sciences
OCE-0939564	NSF Division of Ocean Sciences

Instruments

None available yet

Parameters

Supplied Name	Supplied description	Supplied Units	Standard Name
sequence_type	Description of the type of sequence	unitless	sample_descrip
sample_location	Location where sample was collected	unitless	site_descrip
method	Sequencing method used	unitless	sampling_method
accession_num	NCBI accession number	unitless	accession_number
popset_num	NCBI Popset number	unitless	accession_number
closely_related_to	Description of closely related taxa	unitless	no_bcodmo_term
accession_link	Hyperlink to NCBI for the accession number	unitless	accession_number
popset_link	Hyperlink to NCBI for the Popset	unitless	accession_number

Database

Contribute Data

Dataset: Sequence accessions: archaeal and bacterial clone libraries
Deployment: AT15-56

Dataset acquisition description

Dataset Processing Description

Database

Contribute Data

Dataset: Sequence accessions: archaeal and bacterial clone librariesDeployment: AT15-56

Dataset acquisition description

Dataset Processing Description

Dataset: Sequence accessions: archaeal and bacterial clone libraries
Deployment: AT15-56