Contributors | Affiliation | Role |
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Siegel, David | University of California-Santa Barbara (UCSB-ICESS) | Principal Investigator |
Copley, Nancy | Woods Hole Oceanographic Institution (WHOI BCO-DMO) | BCO-DMO Data Manager |
Please refer to the separate document for the Methodology and PI notes. DMO note: appropriate wavelengths are listed with each parameter; 9.9E+35, -999, NA, and blank cells replaced with 'nd'; time_begin and time_end reformatted from hours and decimal minutes to hhmm
Change history: YYMMDD 061212: original data downloaded from Eddies website (OCEANUS_SPMR_Profiles.xls) 071004: prepared for OCB database by N. Copley, OCB DMO 071117: added to OCB database by C.chandler (BCO-DMO, WHOI)
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lightProbe_OC.csv (Comma Separated Values (.csv), 6.70 MB) MD5:fb75d7cd5b470b718dee4edb773a6121 Primary data file for dataset ID 3027 |
Parameter | Description | Units |
Cruise_ID | cruise ID designation code | dimensionless |
staProx | station number (nearest CTD) | dimensionless |
date_begin | date sampling begins in the format YYYYMMDD | unitless |
yrday | day of year sampling began (GMT) | dimensionless |
time_begin | time at start of profile in the format hhmm | unitless |
time_end | time at end of profile in the format hhmm | unitless |
lon | longitude, negative denotes West | decimal degrees |
lat | latitude, negative denotes South | decimal degrees |
lon_eddy | longitude of eddy negative denotes West | decimal degrees |
lat_eddy | latitude of eddy negative denotes South | decimal degrees |
dist_EC | radial distance from eddy center | kilometers |
comments | comments | dimensionless |
depth | depth, sample, best estimate, usually calculated from pressure | meters |
ed305 | downwelling irradiance at wavelength 305 | microWatts/centimeter^2/nanometer (uW/cm^2/nm) |
ed324 | downwelling irradiance at wavelength 324 | microWatts/centimeter^2/nanometer (uW/cm^2/nm) |
ed340 | downwelling irradiance at wavelength 340 | microWatts/centimeter^2/nanometer (uW/cm^2/nm) |
ed380 | downwelling irradiance at wavelength 380 | microWatts/centimeter^2/nanometer (uW/cm^2/nm) |
ed412 | downwelling irradiance at wavelength 412 | microWatts/centimeter^2/nanometer (uW/cm^2/nm) |
ed443 | downwelling irradiance at wavelength 443 | microWatts/centimeter^2/nanometer (uW/cm^2/nm) |
ed490 | downwelling irradiance at wavelength 490 | microWatts/centimeter^2/nanometer (uW/cm^2/nm) |
ed510 | downwelling irradiance at wavelength 510 | microWatts/centimeter^2/nanometer (uW/cm^2/nm) |
ed555 | downwelling irradiance at wavelength 555 | microWatts/centimeter^2/nanometer (uW/cm^2/nm) |
ed665 | downwelling irradiance at wavelength 665 | microWatts/centimeter^2/nanometer (uW/cm^2/nm) |
ed683 | downwelling irradiance at wavelength 683 | microWatts/centimeter^2/nanometer (uW/cm^2/nm) |
lu305 | upwelling radiance at wavelength 305 | microWatts/meter^2/nanometer/steradian (uW/cm^2/nm/sr) |
lu325 | upwelling radiance at wavelength 324 | microWatts/meter^2/nanometer/steradian (uW/cm^2/nm/sr) |
lu340 | upwelling radiance at wavelength 340 | microWatts/meter^2/nanometer/steradian (uW/cm^2/nm/sr) |
lu380 | upwelling radiance at wavelength 380 | microWatts/meter^2/nanometer/steradian (uW/cm^2/nm/sr) |
lu412 | upwelling radiance at wavelength 412 | microWatts/meter^2/nanometer/steradian (uW/cm^2/nm/sr) |
lu443 | upwelling radiance at wavelength 443 | microWatts/meter^2/nanometer/steradian (uW/cm^2/nm/sr) |
lu490 | upwelling radiance at wavelength 490 | microWatts/meter^2/nanometer/steradian (uW/cm^2/nm/sr) |
lu510 | upwelling radiance at wavelength 510 | microWatts/meter^2/nanometer/steradian (uW/cm^2/nm/sr) |
lu555 | upwelling radiance at wavelength 555 | microWatts/meter^2/nanometer/steradian (uW/cm^2/nm/sr) |
lu665 | upwelling radiance at wavelength 665 | microWatts/meter^2/nanometer/steradian (uW/cm^2/nm/sr) |
lu683 | upwelling radiance at wavelength 683 | microWatts/meter^2/nanometer/steradian (uW/cm^2/nm/sr) |
es325 | downwelling surface irradiance at wavelength 305 | microWatts/centimeter^2/nanometer (uW/cm^2/nm) |
es340 | downwelling surface irradiance at wavelength 324 | microWatts/centimeter^2/nanometer (uW/cm^2/nm) |
es380 | downwelling surface irradiance at wavelength 340 | microWatts/centimeter^2/nanometer (uW/cm^2/nm) |
es412 | downwelling surface irradiance at wavelength 380 | microWatts/centimeter^2/nanometer (uW/cm^2/nm) |
es443 | downwelling surface irradiance at wavelength 412 | microWatts/centimeter^2/nanometer (uW/cm^2/nm) |
es490 | downwelling surface irradiance at wavelength 443 | microWatts/centimeter^2/nanometer (uW/cm^2/nm) |
es509 | downwelling surface irradiance at wavelength 490 | microWatts/centimeter^2/nanometer (uW/cm^2/nm) |
es554 | downwelling surface irradiance at wavelength 510 | microWatts/centimeter^2/nanometer (uW/cm^2/nm) |
es565 | downwelling surface irradiance at wavelength 555 | microWatts/centimeter^2/nanometer (uW/cm^2/nm) |
es665 | downwelling surface irradiance at wavelength 665 | microWatts/centimeter^2/nanometer (uW/cm^2/nm) |
es683 | downwelling surface irradiance at wavelength 683 | microWatts/centimeter^2/nanometer (uW/cm^2/nm) |
kl305 | up-welled (diffuse) attenuation coefficnent of lu at wavelenth 305 | meter^-1 |
kl325 | up-welled (diffuse) attenuation coefficnent of lu at wavelenth 324 | meter^-1 |
kl340 | up-welled (diffuse) attenuation coefficnent of lu at wavelenth 340 | meter^-1 |
kl380 | up-welled (diffuse) attenuation coefficnent of lu at wavelenth 380 | meter^-1 |
kl412 | up-welled (diffuse) attenuation coefficnent of lu at wavelenth 412 | meter^-1 |
kl443 | up-welled (diffuse) attenuation coefficnent of lu at wavelenth 443 | meter^-1 |
kl490 | up-welled (diffuse) attenuation coefficnent of lu at wavelenth 490 | meter^-1 |
kl510 | up-welled (diffuse) attenuation coefficnent of lu at wavelenth 510 | meter^-1 |
kl555 | up-welled (diffuse) attenuation coefficnent of lu at wavelenth 555 | meter^-1 |
kl665 | up-welled (diffuse) attenuation coefficnent of lu at wavelenth 665 | meter^-1 |
kl683 | up-welled (diffuse) attenuation coefficnent of lu at wavelenth 683 | meter^-1 |
kd305 | down-welled (diffuse) attenuation coefficient of ed at wavelength 305 | meter^-1 |
kd325 | down-welled (diffuse) attenuation coefficient of ed at wavelength 324 | meter^-1 |
kd340 | down-welled (diffuse) attenuation coefficient of ed at wavelength 340 | meter^-1 |
kd380 | down-welled (diffuse) attenuation coefficient of ed at wavelength 380 | meter^-1 |
kd412 | down-welled (diffuse) attenuation coefficient of ed at wavelength 412 | meter^-1 |
kd443 | down-welled (diffuse) attenuation coefficient of ed at wavelength 443 | meter^-1 |
kd490 | down-welled (diffuse) attenuation coefficient of ed at wavelength 490 | meter^-1 |
kd510 | down-welled (diffuse) attenuation coefficient of ed at wavelength 510 | meter^-1 |
kd555 | down-welled (diffuse) attenuation coefficient of ed at wavelength 555 | meter^-1 |
kd665 | down-welled (diffuse) attenuation coefficient of ed at wavelength 665 | meter^-1 |
kd683 | down-welled (diffuse) attenuation coefficient of ed at wavelength 683 | meter^-1 |
rrs305 | remote sensing reflectances (lw/ed) at wavelength 305 | steradian^-1 |
rrs325 | remote sensing reflectances (lw/ed) at wavelength 324 | steradian^-1 |
rrs340 | remote sensing reflectances (lw/ed) at wavelength 340 | steradian^-1 |
rrs380 | remote sensing reflectances (lw/ed) at wavelength 380 | steradian^-1 |
rrs412 | remote sensing reflectances (lw/ed) at wavelength 412 | steradian^-1 |
rrs443 | remote sensing reflectances (lw/ed) at wavelength 443 | steradian^-1 |
rrs490 | remote sensing reflectances (lw/ed) at wavelength 490 | steradian^-1 |
rrs510 | remote sensing reflectances (lw/ed) at wavelength 510 | steradian^-1 |
rrs555 | remote sensing reflectances (lw/ed) at wavelength 555 | steradian^-1 |
rrs665 | remote sensing reflectances (lw/ed) at wavelength 665 | steradian^-1 |
rrs683 | remote sensing reflectances (lw/ed) at wavelength 683 | steradian^-1 |
Dataset-specific Instrument Name | Fluorometer |
Generic Instrument Name | Fluorometer |
Generic Instrument Description | A fluorometer or fluorimeter is a device used to measure parameters of fluorescence: its intensity and wavelength distribution of emission spectrum after excitation by a certain spectrum of light. The instrument is designed to measure the amount of stimulated electromagnetic radiation produced by pulses of electromagnetic radiation emitted into a water sample or in situ. |
Dataset-specific Instrument Name | Satlantic Micro-profiler II |
Generic Instrument Name | Satlantic Micro-profiler II |
Generic Instrument Description | The Satlantic Micro-Profiler II is a type of profiling radiometer system. The primary optical measurements are downwelling irradiance (Ed) and upwelling radiance (Lu).The Micro-Pro collects measurements in the following wavelengths: 305, 325, 340, 380, 412, 443, 490, 510, 555, 665, and 683. (Note the additional UV channel). |
Website | |
Platform | R/V Oceanus |
Report | |
Start Date | 2004-06-11 |
End Date | 2004-07-03 |
Description | EDDIES 2004 Survey 1 cruise
Funded by: NSF OCE-0241310
Original cruise data are available from the NSF R2R data catalog (Cruise DOI: 10.7284/900337) |
Website | |
Platform | R/V Oceanus |
Report | |
Start Date | 2004-07-25 |
End Date | 2004-08-12 |
Description | EDDIES project 2004 Survey 2 cruise
Funded by: NSF OCE-0241310
Original cruise data are available from the NSF R2R data catalog |
Website | |
Platform | R/V Oceanus |
Report | |
Start Date | 2005-06-20 |
End Date | 2005-07-15 |
Description | EDDIES project 2005 Survey 1 cruise
Funded by: NSF OCE-0241310
Original cruise data are available from the NSF R2R data catalog |
Website | |
Platform | R/V Oceanus |
Report | |
Start Date | 2005-08-07 |
End Date | 2005-08-26 |
Description | EDDIES project 2005 Survey 2 cruise
Funded by: NSF OCE-0241310
Original cruise data are available from the NSF R2R data catalog |
The original title of this project from the NSF award is: Collaborative Research: Impacts of Eddies and Mixing on Plankton Community Structure and Biogeochemical Cycling in the Sargasso Sea".
Prior results have documented eddy-driven transport of nutrients into the euphotic zone and the associated accumulation of chlorophyll. However, several key aspects of mesoscale upwelling events remain unresolved by the extant database, including: (1) phytoplankton physiological response, (2) changes in community structure, (3) impact on export out of the euphotic zone, (4) rates of mixing between the surface mixed layer and the base of the euphotic zone, and (5) implications for biogeochemistry and differential cycling of carbon and associated bioactive elements. This leads to the following hypotheses concerning the complex, non-linear biological regulation of elemental cycling in the ocean:
H1: Eddy-induced upwelling, in combination with diapycnal mixing in the upper ocean, introduces new nutrients into the euphotic zone.
H2: The increase in inorganic nutrients stimulates a physiological response within the phytoplankton community.
H3: Differing physiological responses of the various species bring about a shift in community structure.
H4: Changes in community structure lead to increases in export from, and changes in biogeochemical cycling within, the upper ocean.
Andrews, J.E., Hartin, C., and Buesseler, K.O.. "7Be Analyses in Seawater by Low Background Gamma-Spectroscopy.," Journal of Radioanalytical and Nuclear Chemistry, v.277, 2008, p. 253.
Andrews, J.E., Hartin, C., Buesseler, K.O.. "7Be Analyses in Seawater by Low Background Gamma-Spectroscopy," Journal of Radioanalytical and Nuclear Chemistry, v.277, 2008, p. 253.
Benitez-Nelson, C.R. and McGillicuddy, D.J.. "Mesoscale Physical-Biological-Biogeochemical Linkages in the Open Ocean: An Introduction to the Results of the E-Flux and EDDIES Programs.," Deep Sea Research II, v.55, 2008, p. 1133.
Benitez-Nelson, C.R. and McGillicuddy, D.J.. "Mesoscale Physical-Biological-Biogeochemical Linkages in the Open Ocean: An Introduction to the Results of the E-Flux and EDDIES Programs," Deep-Sea Research II, v.55, 2008, p. 1133.
Bibby, T.S., Gorbunov, M.Y., Wyman, K.W., Falkowski, P.G.. "Photosynthetic community responses to upwelling in mesoscale eddies in the subtropical North Atlantic and Pacific Oceans," Deep-Sea Research Part II: Topical Studies in Oceanography, v.55, 2008, p. 1310.
Buesseler, K.O., Lamborg, C., Cai, P., Escoube, R., Johnson, R., Pike, S., Masque, P., McGillicuddy, D.J., Verdeny, E.. "Particle Fluxes Associated with Mesoscale Eddies in the Sargasso Sea," Deep Sea Research II, v.55, 2008, p. 1426.
Carlson, C.A., del Giorgio, P., Herdl, G.. "Microbes and the dissipation of energy and respiration: From cells to ecosystems," Oceanography, v.20, 2007, p. 89.
Davis, C.S., and McGillicuddy, D.J.. "Transatlantic Abundance of the N2-Fixing Colonial Cyanobacterium Trichodesmium," Science, v.312, 2006, p. 1517.
Ewart, C.S., Meyers, M.K., Wallner, E., McGillicuddy, D.J., Carlson, C.A.. "Microbial Dynamics in Cyclonic and Anticyclonic Mode-Water Eddies in the Northwestern Sargasso Sea," Deep Sea Research II, v.55, 2008, p. 1334.
Ewart, C.S., Meyers, M.K., Wallner, E., McGillicuddy, D.J., Carlson, C.A.. "Microbial Dynamics in Cyclonic and Anticyclonic Mode-Water Eddies in the Northwestern Sargasso Sea," Deep-Sea Research II, v.55, 2008, p. 1334.
Goldthwait, S.A. and Steinberg, D.K.. "Elevated biomass of mesozooplankton and enhanced fecal pellet flux in cyclonic and mode-water eddies in the Sargasso Sea," Deep-Sea Research Part II: Topical Studies in Oceanography, v.55, 2008, p. 1360.
Greenan, B.J.W.. "Shear and Richardson number in a mode-water eddy," Deep-Sea Research Part II: Topical Studies in Oceanography, v.55, 2008, p. 1161.
Jenkins, W.J., McGillicuddy, D.J., and Lott III, D.E.. "The Distributions of, and Relationship Between 3 He and Nitrate in Eddies," Deep Sea Research II, v.55, 2008, p. 1389.
Jenkins, W.J., McGillicuddy, D.J., Lott III, D.E.. "The Distributions of, and Relationship Between 3 He and Nitrate in Eddies," Deep-Sea Research II, v.55, 2008, p. 1389.
Ledwell, J.R., McGillicuddy, D.J., and Anderson, L.A.. "Nutrient Flux into an Intense Deep Chlorophyll Layer in a Mode-water Eddy.," Deep Sea Research II, v.55, 2008, p. 1139.
Ledwell, J.R., McGillicuddy, D.J., Anderson, L.A.. "Nutrient Flux into an Intense Deep Chlorophyll Layer in a Mode-water Eddy," Deep-Sea Research II, v.55, 2008, p. 1139.
Li, Q.P. and Hansell, D.A.. "Intercomparison and coupling of MAGIC and LWCC techniques for trace analysis of phosphate in seawater," Analytical Chemica Acta, v.611, 2008, p. 68.
Li, Q.P., Hansell, D.A., McGillicuddy, D.J., Bates, N.R., Johnson, R.J.. "Tracer-based assessment of the origin and biogeochemical transformation of a cyclonic eddy in the Sargasso Sea," Journal of Geophysical Research, v.113, 2008, p. 10006.
Li, Q.P., Hansell, D.A., Zhang, J.-Z.. "Underway monitoring of nanomolar nitrate plus nitrite and phosphate in oligotrophic seawater," Limnology and Oceanography: Methods, v.6, 2008, p. 319.
Li, Q.P., Zhang, J.-Z., Millero, F.J., Hansell, D.A.. "Continuous colorimetric determination of trace ammonium in seawater with a long-path liquid waveguide capillary cell," Marine Chemistry, v.96, 2005, p. 73.
McGillicuddy, D.J., et. al.. "Eddy/Wind Interactions Stimulate Extraordinary Mid-Ocean Plankton Blooms," Science, v.316, 2007, p. 1021.
McGillicuddy, D.J., Ledwell, J.R., and Anderson, L.A.. "Response to Comment on "Eddy/Wind Interactions Stimulate Extraordinary Mid-Ocean Plankton Bloom".," Science, v.320, 2008.
McGillicuddy, D.J., Ledwell, J.R., Anderson, L.A.. "Response to Comment on "Eddy/Wind Interactions Stimulate Extraordinary Mid-Ocean Plankton Bloom"," Science, v.320, 2008.
McGillicuddy, et. al.. "Eddy/Wind Interactions Stimulate Extraordinary Mid-Ocean Plankton Blooms.," Science, v.316, 2007, p. 1021.
Mourino B., and McGillicuddy, D.J.. "Mesoscale Variability in the Metabolic Balance of the Sargasso Sea," Limnology & Oceanography, v.51, 2006, p. 2675.
The Ocean Carbon and Biogeochemistry (OCB) program focuses on the ocean's role as a component of the global Earth system, bringing together research in geochemistry, ocean physics, and ecology that inform on and advance our understanding of ocean biogeochemistry. The overall program goals are to promote, plan, and coordinate collaborative, multidisciplinary research opportunities within the U.S. research community and with international partners. Important OCB-related activities currently include: the Ocean Carbon and Climate Change (OCCC) and the North American Carbon Program (NACP); U.S. contributions to IMBER, SOLAS, CARBOOCEAN; and numerous U.S. single-investigator and medium-size research projects funded by U.S. federal agencies including NASA, NOAA, and NSF.
The scientific mission of OCB is to study the evolving role of the ocean in the global carbon cycle, in the face of environmental variability and change through studies of marine biogeochemical cycles and associated ecosystems.
The overarching OCB science themes include improved understanding and prediction of: 1) oceanic uptake and release of atmospheric CO2 and other greenhouse gases and 2) environmental sensitivities of biogeochemical cycles, marine ecosystems, and interactions between the two.
The OCB Research Priorities (updated January 2012) include: ocean acidification; terrestrial/coastal carbon fluxes and exchanges; climate sensitivities of and change in ecosystem structure and associated impacts on biogeochemical cycles; mesopelagic ecological and biogeochemical interactions; benthic-pelagic feedbacks on biogeochemical cycles; ocean carbon uptake and storage; and expanding low-oxygen conditions in the coastal and open oceans.