Averaged bottle measurements from CTD casts on R/V Oceanus cruise OC449-03 in the Coastal transect between Cape Verde and Mauritanian coast in 2008 (SIRENA project)

Website: https://www.bco-dmo.org/dataset/3491
Version: 13 October 2011
Version Date: 2011-10-13

Project
» Sources of Iron to the EasterN tropical Atlantic (SIRENA)

Program
» Ocean Carbon and Biogeochemistry (OCB)
ContributorsAffiliationRole
Lam, Phoebe J.Woods Hole Oceanographic Institution (WHOI)Principal Investigator, Contact
Gegg, Stephen R.Woods Hole Oceanographic Institution (WHOI BCO-DMO)BCO-DMO Data Manager


Dataset Description

CTD Bottle Data - avg, stdev,min and max values at bottle firings for various parameters
 
PI's Note/09May2011:
In comparing my pump seacat CTD to the ship's CTD, I've discovered that the ship's CTD's fluorescence and beam attenuation are no good, at least for OC449-3. The ship's fluorometer was clearly just not working.  The ship's transmissometer misbehaved in a more subtle manner--oceanographically consistent, but of a different pattern than my pump seacat data.  I concluded that my pump seacat CTD's transmissometer is the "correct" one by comparing to discrete particulate carbon measurements on particles collected on my pumps.  Both particulate carbon concentrations and beam attenuation from my pump seacat CTD show a minimum at 500m at OC449-3 station 3, whereas the ship's CTD shows an anomalous minimum in subsurface beam attenuation at station 2, which is not seem in the particulate carbon concentrations.
 

Methods & Sampling

* Sea-Bird SBE 9 Data File:
* FileName = C:dataoc449-03_016.hdr
* Software Version Seasave V 7.14c
* Temperature SN = 2265
* Conductivity SN = 2304
* Number of Bytes Per Scan = 40
* Number of Voltage Words = 5
* Number of Scans Averaged by the Deck Unit = 1
* System UpLoad Time = Sep 13 2008 23:43:34
* NMEA Latitude = 19 50.80 N
* NMEA Longitude = 017 41.17 W
* NMEA UTC (Time) = Sep 13 2008  23:43:32
* Store Lat/Lon Data = Append to Every Scan
** station_006
# interval = seconds: 0.0416667                   
# start_time = Sep 13 2008 23:43:34
# sensor 0 = Frequency  0  temperature, primary, 2265, 2007-10-24
# sensor 1 = Frequency  1  conductivity, primary, 2304, 2007-10-25, cpcor = -9.5700e-08
# sensor 2 = Frequency  2  pressure, 69685, 12/18/2002
# sensor 3 = Frequency  3  temperature, secondary, 2271, 2007-10-24
# sensor 4 = Frequency  4  conductivity, secondary, 2645, 2007-10-25, cpcor = -9.5700e-08
# sensor 5 = Extrnl Volt  0  WET Labs, ECO_AFL
# sensor 6 = Extrnl Volt  1  userpoly 0, FLNTURTD-1012, 2008-04-18
# sensor 7 = Extrnl Volt  3  transmissometer, primary, CST-1117DR, 2008-04-30
# sensor 8 = Extrnl Volt  4  altimeter
# sensor 9 = Extrnl Volt  5  Oxygen, SBE, primary, 794, 2008-09-01
# sensor 10 = Extrnl Volt  9  surface irradiance (SPAR), degrees = 0.0
# datcnv_date = Sep 16 2008 14:23:13, 7.15
# datcnv_in = c:ctd_processingoc449-03_016.hex c:ctd_processingoc449-03_016.con 
# datcnv_bottle_scan_range_source = scans marked with bottle confirm bit, 0, 2
# bottlesum_date = Sep 16 2008 14:24:56, 7.15
# bottlesum_in = c:ctd_processingoc449-03_016.ros c:ctd_processingoc449-03_016.con c:ctd_processingoc449-03_016.BL
 

Data Processing Description

BCO-DMO Processing Notes
- Awk written to reformat original .btl files contributed by Phoebe Lam
- AWK: OC449-03_CTDbtl_2_BCODMO.awk

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Data Files

File
CTDbtl_OC449_03.csv
(Comma Separated Values (.csv), 302.96 KB)
MD5:90f22101afd22e1f13190542e106fd95
Primary data file for dataset ID 3491

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Parameters

ParameterDescriptionUnits
CTD_DataSet_Id

CTD Dataset Id

text
date

Station date

YYYYMMDD
time

Station time

HHMMSS
lat

Station latitude from header record (South is negative)

decimal degrees
lon

Station longitude from header record (West is negative)

decimal degrees
bottle_position

Bottle position

integer
date_bottle

Date of bottle firing

YYYYMMDD
time_bottle

Time of bottle firing

HHMMSS
Density00

Density

Kg/m^3
N2satML_L

Nitrogen Saturation

ml/l
OxsatML_L

Oxygen Saturation

ml/l
Sbeox0ML_L

Oxygen SBE 43

ml/l
Potemp090C

Potential Temperature ITS-90

degrees Celsius
Sal00

Salinity

PSU
Sva

Specific Volume Anomaly

10^-8 * m^3/Kg
TimeS_avg

Elapsed time average

seconds
TimeS_sdev

Elapsed time standard of deviation

seconds
TimeS_min

Elapsed time minimum

seconds
TimeS_max

Elapsed time maximum

seconds
PrDM_avg

Pressure Digiquartz average

decibars
PrDM_sdev

Pressure Digiquartz standard of deviation

decibars
PrDM_min

Pressure Digiquartz minimum

decibars
PrDM_max

Pressure Digiquartz maximum

decibars
DepSM_avg

Depth salt water average

meters
DepSM_sdev

Depth salt water standard of deviation

meters
DepSM_min

Depth salt water minimum

meters
DepSM_max

Depth salt water maximum

meters
T090C_avg

Temperature ITS-90 average

degrees Celsius
T090C_sdev

Temperature ITS-90 standard of deviation

degrees Celsius
T090C_min

Temperature ITS-90 minimum

degrees Celsius
T090C_max

Temperature ITS-90 maximum

degrees Celsius
T190C_avg

Temperature 2 ITS-90 average

degrees Celsius
T190C_sdev

Temperature 2 ITS-90 standard of deviation

degrees Celsius
T190C_min

Temperature 2 ITS-90 minimum

degrees Celsius
T190C_max

Temperature 2 ITS-90 maximum

degrees Celsius
Sal00_avg

Salinity average

PSU
Sal00_sdev

Salinity standard of deviation

PSU
Sal00_min

Salinity minimum

PSU
Sal00_max

Salinity maximum

PSU
Sal11_avg

Salinity 2 average

PSU
Sal11_sdev

Salinity 2 standard of deviation

PSU
Sal11_min

Salinity 2 minimum

PSU
Sal11_max

Salinity 2 maximum

PSU
C0S_m_avg

Conductivity average

S/m
C0S_m_sdev

Conductivity standard of deviation

S/m
C0S_m_min

Conductivity minimum

S/m
C0S_m_max

Conductivity maximum

S/m
C1S_m_avg

Conductivity 2 average

S/m
C1S_m_sdev

Conductivity 2 standard of deviation

S/m
C1S_m_min

Conductivity 2 minimum

S/m
C1S_m_max

Conductivity 2 maximum

S/m
Sbeox0V_avg

Oxygen Voltage SBE 43 average

volts
Sbeox0V_sdev

Oxygen Voltage SBE 43 standard of deviation

volts
Sbeox0V_min

Oxygen Voltage SBE 43 minimum

volts
Sbeox0V_max

Oxygen Voltage SBE 43 maximum

volts
Sbeox0ML_L_avg

Oxygen SBE 43 average

ml/l
Sbeox0ML_L_sdev

Oxygen SBE 43 standard of deviation

ml/l
Sbeox0ML_L_min

Oxygen SBE 43 minimum

ml/l
Sbeox0ML_L_max

Oxygen SBE 43 maximum

ml/l
Xmiss_avg

Beam Transmission Chelsea/Seatech/Wetlab CStar average

percentage
Xmiss_sdev

Beam Transmission Chelsea/Seatech/Wetlab CStar standard of deviation

percentage
Xmiss_min

Beam Transmission Chelsea/Seatech/Wetlab CStar minimum

percentage
Xmiss_max

Beam Transmission Chelsea/Seatech/Wetlab CStar maximum

percentage
Density00_avg

Density average

Kg/m^3
Density00_sdev

Density standard of deviation

Kg/m^3
Density00_min

Density minimum

Kg/m^3
Density00_max

Density maximum

Kg/m^3
Potemp090C_avg

Potential Temperature ITS-90 average

degrees Celsius
Potemp090C_sdev

Potential Temperature ITS-90 standard of deviation

degrees Celsius
Potemp090C_min

Potential Temperature ITS-90 minimum

degrees Celsius
Potemp090C_max

Potential Temperature ITS-90 maximum

degrees Celsius
FlECO_minus_AFL_avg

Fluorescence Wetlab ECO-AFL/FL average

mg/m^3
FlECO_minus_AFL_sdev

Fluorescence Wetlab ECO-AFL/FL standard of deviation

mg/m^3
FlECO_minus_AFL_min

Fluorescence Wetlab ECO-AFL/FL minimum

mg/m^3
FlECO_minus_AFL_max

Fluorescence Wetlab ECO-AFL/FL maximum

mg/m^3
Upoly0_avg

Upoly 0 WetLabs Turbidity average

tbd
Upoly0_sdev

Upoly 0 WetLabs Turbidity standard of deviation

tbd
Upoly0_min

Upoly 0 WetLabs Turbidity minimum

tbd
Upoly0_max

Upoly 0 WetLabs Turbidity maximum

tbd
AltM_avg

Altimeter average

meters
AltM_sdev

Altimeter standard of deviation

meters
AltM_min

Altimeter minimum

meters
AltM_max

Altimeter maximum

meters
Scan_avg

Scan average

integer
Scan_sdev

Scan standard of deviation

integer
Scan_min

Scan minimum

integer
Scan_max

Scan maximum

integer


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Instruments

Dataset-specific Instrument Name
CTD Sea-Bird SBE 911plus
Generic Instrument Name
CTD Sea-Bird SBE 911plus
Generic Instrument Description
The Sea-Bird SBE 911 plus is a type of CTD instrument package for continuous measurement of conductivity, temperature and pressure. The SBE 911 plus includes the SBE 9plus Underwater Unit and the SBE 11plus Deck Unit (for real-time readout using conductive wire) for deployment from a vessel. The combination of the SBE 9 plus and SBE 11 plus is called a SBE 911 plus. The SBE 9 plus uses Sea-Bird's standard modular temperature and conductivity sensors (SBE 3 plus and SBE 4). The SBE 9 plus CTD can be configured with up to eight auxiliary sensors to measure other parameters including dissolved oxygen, pH, turbidity, fluorescence, light (PAR), light transmission, etc.). more information from Sea-Bird Electronics

Dataset-specific Instrument Name
Niskin bottle
Generic Instrument Name
Niskin bottle
Generic Instrument Description
A Niskin bottle (a next generation water sampler based on the Nansen bottle) is a cylindrical, non-metallic water collection device with stoppers at both ends. The bottles can be attached individually on a hydrowire or deployed in 12, 24, or 36 bottle Rosette systems mounted on a frame and combined with a CTD. Niskin bottles are used to collect discrete water samples for a range of measurements including pigments, nutrients, plankton, etc.


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Deployments

OC449-03

Website
Platform
R/V Oceanus
Start Date
2008-09-08
End Date
2008-09-18
Description
R/V Oceanus Voyage #449, Leg III was a Coastal transect between Cape Verde and the Mauritanian coast (17N/24.5W to 20N/17.3W). The main scientific objective was to test the hypothesis that the continental margin of northwest Africa provides a significant subsurface supply of iron to the open eastern tropical Atlantic. The planned scientific activities include CTD casts, In Situ Water Pump casts for large volume water collection, Gravity Coring, and Aerosol sampling. Scientific personnel: Dr. Phoebe Lam, Chief Scientist, Woods Hole Oceanographic Institution Dr. Henrieta Dulaiova, Woods Hole Oceanographic Institution Mr. Steven Pike, Woods Hole Oceanographic Institution Mr. James Saenz, Woods Hole Oceanographic Institution Dr. Aron Stubbins, Old Dominion University Ms. Hongmei Chen, Old Dominion University Dr. Edward Michael Perdue, Georgia Institute of Technology Mr. Nelson Green, Georgia Institute of Technology Mr. Péricles Silva, Instituto Nacional de Desenvolvimento das Pescas (INDP) Dr. Anibal Medina, Instituto Nacional de Desenvolvimento das Pescas (INDP) Mr. Alexander Dorsk, Woods Hole Oceanographic Institution WHOI cruise planning synopsis> Cruise information and original data are available from the NSF R2R data catalog.


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Project Information

Sources of Iron to the EasterN tropical Atlantic (SIRENA)


Coverage: Tropical North Atlantic, focusing on a Cape Verde to Mauritanian Coast transect


We will test the hypothesis that the continental margin of northwest Africa provides a significant subsurface supply of iron to the open eastern tropical Atlantic that supplements dust.

We will test our continental margin hypothesis with a wintertime visit to the new Tropical Eastern North Atlantic Time-Series Observatory (TENATSO) near Cape Verde, located in the eastern tropical Atlantic about 850 km downstream of Mauritanian coastal upwelling, and a summertime cross-shelf transect from the Mauritanian coast to TENATSO with Ed Boyle, who is already funded to study iron in the tropical Atlantic. Our cross-shelf transect will closely examine the potential lateral source of Fe, and evaluate it against an atmospheric source of Fe. Our proposal takes advantage of a novel combination of measurements to uniquely determine the importance of lateral transport vs. dust inputs and subsurface remineralization as Fe sources to the surface ocean. These measurements include:

1) synchrotron x-ray analysis of particulate iron "hotspots": micron-size particles of iron detected with a synchrotron x-ray fluorescence microprobe have been previously shown to exhibit maxima at depths of continental margin input in two ocean basins. Further, the Ti:Fe ratios and the mineralogy of these particles of iron can distinguish dust-derived vs. continental margin iron. This is a qualitative tracer for a dust vs continental margin source of Fe.

2) radium isotopes: the major source of 228Ra into the study area is by diffusion from 232Th-bearing near shore and continental shelf sediments. An open-ocean to coastal transect of 228Ra activities will allow us to determine horizontal mass transfer. 228Ra will be used to quantify the lateral flux of iron from the shelf.

3) 234Th profiles: high vertical resolution 234Th profiles can be used to determine the depth of particle remineralization. This will be used to determine whether or not putative subsurface Fe maxima are from remineralization of Fe-bearing particles.

TENATSO (Tropical Eastern North Atlantic Time-Series Observatory) time series station
16°N, 24°W, North-east of Mindelo, Sao Vicente, Cape Verde

TENATSO Home

TENATSO/SIRENA at Cafe Thorium/WHOI



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Program Information

Ocean Carbon and Biogeochemistry (OCB)


Coverage: Global


The Ocean Carbon and Biogeochemistry (OCB) program focuses on the ocean's role as a component of the global Earth system, bringing together research in geochemistry, ocean physics, and ecology that inform on and advance our understanding of ocean biogeochemistry. The overall program goals are to promote, plan, and coordinate collaborative, multidisciplinary research opportunities within the U.S. research community and with international partners. Important OCB-related activities currently include: the Ocean Carbon and Climate Change (OCCC) and the North American Carbon Program (NACP); U.S. contributions to IMBER, SOLAS, CARBOOCEAN; and numerous U.S. single-investigator and medium-size research projects funded by U.S. federal agencies including NASA, NOAA, and NSF.

The scientific mission of OCB is to study the evolving role of the ocean in the global carbon cycle, in the face of environmental variability and change through studies of marine biogeochemical cycles and associated ecosystems.

The overarching OCB science themes include improved understanding and prediction of: 1) oceanic uptake and release of atmospheric CO2 and other greenhouse gases and 2) environmental sensitivities of biogeochemical cycles, marine ecosystems, and interactions between the two.

The OCB Research Priorities (updated January 2012) include: ocean acidification; terrestrial/coastal carbon fluxes and exchanges; climate sensitivities of and change in ecosystem structure and associated impacts on biogeochemical cycles; mesopelagic ecological and biogeochemical interactions; benthic-pelagic feedbacks on biogeochemical cycles; ocean carbon uptake and storage; and expanding low-oxygen conditions in the coastal and open oceans.



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Funding

Funding SourceAward
NSF Division of Ocean Sciences (NSF OCE)

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