Contributors | Affiliation | Role |
---|---|---|
Durbin, Edward | University of Rhode Island (URI-GSO) | Principal Investigator |
Casas, Maria C | University of Rhode Island (URI-GSO) | Scientist, Technician |
Allison, Dicky | Woods Hole Oceanographic Institution (WHOI BCO-DMO) | BCO-DMO Data Manager |
Zooplankton Meter3 Data from GSO/URI - Bongo Nets only
The Zooplankton Meter3 Database for the Georges Bank GLOBEC project was originally located in the laboratory of Ted Durbin at the Graduate School of Oceanography, University of Rhode Island. It was accessed via the U.S. GLOBEC Georges Bank data management system using SQLPlus network access to the data base management system at URI. Data were cached and are served from the local computer.
A description of the original URI database is available online and includes the design and variable definitions. A version of this document is shown here.
Note: Our program's Data Acknowledgement Policy requires that any person making substantial use of a data set must communicate with the investigators who acquired the data prior to publication and anticipate that the data collectors will be co-authors of published results.
The following documentation applies to the data found locally on the WHOI GLOBEC Data Server:
The data is served as a hierarchy. The least changing variables are in higher order levels (e.g., cruise id, year, month, etc.), while variables that change the most are in the lower order levels (e.g., time of collection, net number, taxon collected, etc.). There are six levels within the data; variable names and descriptions are given in the metadata.
Most column variable names and instrument names were taken from the U.S. GLOBEC Georges Bank data thesaurus; those that were not follow the GLOBEC data protocols. The taxonomic code variable (taxon_code) is from the National Oceanographic Data Center's Taxonomic List, version 8. Taxonomic information is built into these ten-digit codes as they reflect the systematic nomenclature.
You may contact BCO-DMO for additional help.
28 Sept 2012 - BCO-DMO re-formatted data, adding the stage and count columns.
File |
---|
zoo_cb_meter_bongo.csv (Comma Separated Values (.csv), 3.91 MB) MD5:2981c38f086567d633d13aeb3eea16cd Primary data file for dataset ID 3523 |
Parameter | Description | Units |
station | Consecutive station number during cruise. | unitless |
station_std | Standard Broad scale station number. | unitless |
depth_w | Water depth, in meters | meters |
cruiseid | Cruise Identifier. (e.g., AL9607, EN276, OC275) | unitless |
year_cruise_begin | 4-digit year the cruise began. | YYYY |
month_cruise_begin | 2-digit month the cruise began. | mm (01 to 12) |
day_cruise_begin | 2-digit day of the month when the cruise began. | dd (01 to 31) |
year_cruise_end | 4-digit year the cruise ended. | YYYY |
month_cruise_end | 2-digit month when the cruise ended. | mm (01 to 12) |
day_cruise_end | 2-digit day of the month when the cruise ended. | dd (01 to 31) |
event | Event or operation number. Unique ID. | unitless |
inst | Instrument used to collect or process data. | unitless |
tow | Tow or haul number. | unitless |
lat_begin | Latitude at Beginning of measurement, in decimal degrees. (south is negative) | decimal degrees |
lon_begin | Longitude at Beginning of measurement, in decimal degrees. (west is negative) | decimal degrees |
year_utc_begin | Year (UTC) at the beginning of the measurement | YYYY |
month_utc_begin | 2-digit month (UTC) at the beginning of the measurement. | mm (01 to 12) |
day_utc_begin | 2-digit day (UTC) at the beginning of the measurement. | dd (01 to 31) |
time_utc_begin | Time (UTC) at the beginning of the measurement | HHMM |
year_utc_end | Year (UTC) at the end of the measurement | YYYY |
month_utc_end | 2-digit month (UTC) at the end of the measurement. | mm (01 to 12) |
day_utc_end | 2-digit day (UTC) at the end of the measurement. | dd (01 to 31) |
time_utc_end | Time (UTC) at the end of the measurement | HHMM |
allsort_flag | Flag for sorting. Default = 'n'. When all nets for particular tow are sorted, flag = 'y'. | unitless |
net | Net number | unitless |
vol_net | Volume of water filtered by net, in cubic meters. | cubic meters |
depth_begin | Depth of sampler at beginning of measurement, meters. | meters |
depth_end | Depth of sampler at end of measurement, meters. | meters |
gearcode | Gear Code - used by NMFS. Three digit code that specifies gear and mesh size of net. | unitless |
count_flag | Counting method flag for sorting. Default ='none'. | unitless |
counter | Initials of sorter and date sorted. | text |
taxon | Taxon name. | text |
taxon_code | Taxonomic Code. Ten digit number from NODC Taxonomic List, v. 8. | |
stage | Taxon stage: | unitless |
count | Count of taxa per stage per cubic meter. | unitless |
Dataset-specific Instrument Name | Bongo Net |
Generic Instrument Name | Bongo Net |
Generic Instrument Description | A Bongo Net consists of paired plankton nets, typically with a 60 cm diameter mouth opening and varying mesh sizes, 10 to 1000 micron. The Bongo Frame was designed by the National Marine Fisheries Service for use in the MARMAP program. It consists of two cylindrical collars connected with a yoke so that replicate samples are collected at the same time. Variations in models are designed for either vertical hauls (OI-2500 = NMFS Pairovet-Style, MARMAP Bongo, CalVET) or both oblique and vertical hauls (Aquatic Research). The OI-1200 has an opening and closing mechanism that allows discrete "known-depth" sampling. This model is large enough to filter water at the rate of 47.5 m3/minute when towing at a speed of two knots. More information: Ocean Instruments, Aquatic Research, Sea-Gear |
Website | |
Platform | R/V Albatross IV |
Report | |
Start Date | 1995-06-05 |
End Date | 1995-06-15 |
Description | broad-scale |
Website | |
Platform | R/V Albatross IV |
Report | |
Start Date | 1996-05-06 |
End Date | 1996-05-17 |
Description | broad-scale |
Website | |
Platform | R/V Albatross IV |
Report | |
Start Date | 1997-05-19 |
End Date | 1997-05-27 |
Description | broad-scale |
Website | |
Platform | R/V Albatross IV |
Report | |
Start Date | 1998-01-07 |
End Date | 1998-01-19 |
Description | broad-scale |
Website | |
Platform | R/V Albatross IV |
Report | |
Start Date | 1998-05-13 |
End Date | 1998-05-22 |
Description | broad-scale |
Website | |
Platform | R/V Albatross IV |
Report | |
Start Date | 1998-06-16 |
End Date | 1998-06-26 |
Description | broad-scale |
Website | |
Platform | R/V Albatross IV |
Report | |
Start Date | 1999-01-12 |
End Date | 1999-01-24 |
Description | broad-scale |
Website | |
Platform | R/V Albatross IV |
Start Date | 1999-05-19 |
End Date | 1999-05-27 |
Description | broad-scale |
Website | |
Platform | R/V Endeavor |
Start Date | 1995-02-10 |
End Date | 1995-02-20 |
Description | broad-scale |
Website | |
Platform | R/V Endeavor |
Report | |
Start Date | 1995-03-13 |
End Date | 1995-03-24 |
Description | broad-scale |
Website | |
Platform | R/V Endeavor |
Start Date | 1995-04-11 |
End Date | 1995-04-22 |
Description | broad-scale |
Website | |
Platform | R/V Endeavor |
Report | |
Start Date | 1996-01-10 |
End Date | 1996-01-22 |
Description | broad-scale |
Website | |
Platform | R/V Endeavor |
Start Date | 1996-02-13 |
End Date | 1996-02-25 |
Description | broad-scale |
Website | |
Platform | R/V Endeavor |
Start Date | 1996-04-08 |
End Date | 1996-04-20 |
Description | broad-scale |
Website | |
Platform | R/V Endeavor |
Report | |
Start Date | 1999-03-10 |
End Date | 1999-03-23 |
Description | broad-scale |
Website | |
Platform | R/V Endeavor |
Start Date | 1999-04-17 |
End Date | 1999-05-02 |
Description | process |
Website | |
Platform | R/V Oceanus |
Start Date | 1996-03-11 |
End Date | 1996-03-22 |
Description | broad-scale |
Website | |
Platform | R/V Oceanus |
Report | |
Start Date | 1997-02-11 |
End Date | 1997-02-23 |
Description | broad-scale |
Website | |
Platform | R/V Oceanus |
Report | |
Start Date | 1997-03-16 |
End Date | 1997-03-28 |
Description | broad-scale |
Website | |
Platform | R/V Oceanus |
Report | |
Start Date | 1997-04-05 |
End Date | 1997-04-17 |
Description | process fish vital rates |
Website | |
Platform | R/V Oceanus |
Report | |
Start Date | 1997-04-22 |
End Date | 1997-05-02 |
Description | broad-scale |
Website | |
Platform | R/V Oceanus |
Report | |
Start Date | 1997-05-06 |
End Date | 1997-05-23 |
Description | process |
Website | |
Platform | R/V Oceanus |
Start Date | 1998-02-06 |
End Date | 1998-02-19 |
Description | broad-scale |
Website | |
Platform | R/V Oceanus |
Report | |
Start Date | 1998-03-15 |
End Date | 1998-03-27 |
Description | broad-scale |
The U.S. GLOBEC Georges Bank Program is a large multi- disciplinary multi-year oceanographic effort. The proximate goal is to understand the population dynamics of key species on the Bank - Cod, Haddock, and two species of zooplankton (Calanus finmarchicus and Pseudocalanus) - in terms of their coupling to the physical environment and in terms of their predators and prey. The ultimate goal is to be able to predict changes in the distribution and abundance of these species as a result of changes in their physical and biotic environment as well as to anticipate how their populations might respond to climate change.
The effort is substantial, requiring broad-scale surveys of the entire Bank, and process studies which focus both on the links between the target species and their physical environment, and the determination of fundamental aspects of these species' life history (birth rates, growth rates, death rates, etc).
Equally important are the modelling efforts that are ongoing which seek to provide realistic predictions of the flow field and which utilize the life history information to produce an integrated view of the dynamics of the populations.
The U.S. GLOBEC Georges Bank Executive Committee (EXCO) provides program leadership and effective communication with the funding agencies.
U.S. GLOBEC (GLOBal ocean ECosystems dynamics) is a research program organized by oceanographers and fisheries scientists to address the question of how global climate change may affect the abundance and production of animals in the sea.
The U.S. GLOBEC Program currently had major research efforts underway in the Georges Bank / Northwest Atlantic Region, and the Northeast Pacific (with components in the California Current and in the Coastal Gulf of Alaska). U.S. GLOBEC was a major contributor to International GLOBEC efforts in the Southern Ocean and Western Antarctic Peninsula (WAP).
Funding Source | Award |
---|---|
National Oceanic and Atmospheric Administration (NOAA) | |
NSF Division of Ocean Sciences (NSF OCE) |