Dataset: CTD - Bottle Summary

Name: CTD bottle data summary from R/V New Horizon cruise NH1008 in Monterey Bay, near MBARI buoy M1 (36.747?N, 122.022?W); 2010 (GATEKEEPERS project)
Published: 2012-09-10
Keywords: oceans

Cite This Dataset

Spatial Extent: N:37.044167 E:-122.000833 S:36.427833 W:-123.453667

Project:

Zooplankton feeding at the base of the particle maximum: Gatekeepers of the Vertical Flux? (GATEKEEPERS)

Principal Investigator:

David M. Checkley (University of California-San Diego Scripps, UCSD-SIO)

Co-Principal Investigator:

Michael Dagg (Louisiana Universities Marine Consortium, LUMCON)

George A. Jackson (Texas A&M University, TAMU)

Contact:

David M. Checkley (University of California-San Diego Scripps, UCSD-SIO)

BCO-DMO Data Manager:

Stephen R. Gegg (Woods Hole Oceanographic Institution, WHOI BCO-DMO)

Version:

10 September 2012

Version Date:

2012-09-10

Validated:

Current State:

Final no updates expected

CTD bottle data summary from R/V New Horizon cruise NH1008 in Monterey Bay, near MBARI buoy M1 (36.747?N, 122.022?W); 2010 (GATEKEEPERS project)

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Description

CTD - Bottle Summary
CTD Bottle Data - avg, stdev,min and max values at bottle firings for various parameters

Methods & Sampling

* Sea-Bird SBE 9 Data File:
* FileName = C:CTDCheckley�35.hex
* Software Version Seasave V 7.20b
* Temperature SN = 4308
* Conductivity SN = 2319
* Number of Bytes Per Scan = 44
* Number of Voltage Words = 5
* Number of Scans Averaged by the Deck Unit = 1
* Append System Time to Every Scan
* System UpLoad Time = Jul 19 2010 06:04:19
* NMEA Latitude = 36 39.85 N
* NMEA Longitude = 122 01.96 W
* NMEA UTC (Time) = Jul 19 2010 06:04:22
* Store Lat/Lon Data = Append to Every Scan
** R/V New Horizon
** NH1008
# interval = seconds: 0.0416667
# start_time = Jul 19 2010 06:04:22
# ?xml version="1.0" encoding="UTF-8"?
# Sensors count="15"
#    sensor Channel="1"
#      !-- Frequency 0, Temperature --
#      TemperatureSensor SensorID="55"
#        SerialNumber 4308 SerialNumber
#        CalibrationDate 26-Apr-2010 CalibrationDate
#        UseG_J 1 UseG_J
#        A 4.36407076e-003 A
#        B 6.45448128e-004 B
#        C 2.27855611e-005 C
#        D 1.92340747e-006 D
#        F0_Old 1000.000 F0_Old
#        G 4.36387038e-003 G
#        H 6.45235808e-004 H
#        I 2.27528596e-005 I
#        J 1.92187718e-006 J
#        F0 1000.000 F0
#        Slope 1.00000000 Slope
#        Offset 0.0000 Offset
#      TemperatureSensor
#    sensor
#    sensor Channel="2"
#      !-- Frequency 1, Conductivity --
#      ConductivitySensor SensorID="3"
#        SerialNumber 2319 SerialNumber
#        CalibrationDate 12-Jun-09 CalibrationDate
#        UseG_J 1 UseG_J
#        !-- Cell const and series R are applicable only for wide range sensors. --
#        SeriesR 0.0000 SeriesR
#        CellConst 2000.0000 CellConst
#        Coefficients equation="0"
#          A 0.00000000e+000 A
#          B 0.00000000e+000 B
#          C 0.00000000e+000 C
#          D 0.00000000e+000 D
#          M 0.0 M
#          CPcor -9.57000000e-008 CPcor
#        Coefficients
#        Coefficients equation="1"
#          G -1.03211898e+001 G
#          H 1.50018726e+000 H
#          I -3.82697724e-004 I
#          J 1.04707946e-004 J
#          CPcor -9.57000000e-008 CPcor
#          CTcor 3.2500e-006 CTcor
#        Coefficients
#        Slope 1.00000000 Slope
#        Offset 0.00000 Offset
#      ConductivitySensor
#    sensor
#    sensor Channel="3"
#      !-- Frequency 2, Pressure, Digiquartz with TC --
#      PressureSensor SensorID="45"
#        SerialNumber 0569 SerialNumber
#        CalibrationDate 09-OCT-08 CalibrationDate
#        C1 -4.261906e+004 C1
#        C2 -3.648911e-001 C2
#        C3 1.474535e-002 C3
#        D1 3.768543e-002 D1
#        D2 0.000000e+000 D2
#        T1 3.044473e+001 T1
#        T2 -4.107907e-004 T2
#        T3 3.624599e-006 T3
#        T4 1.375951e-008 T4
#        Slope 1.00000000 Slope
#        Offset 0.00000 Offset
#        T5 0.000000e+000 T5
#        AD590M 1.286170e-002 AD590M
#        AD590B -8.288260e+000 AD590B
#      PressureSensor
#    sensor
#    sensor Channel="4"
#      !-- Frequency 3, Temperature, 2 --
#      TemperatureSensor SensorID="55"
#        SerialNumber 4476 SerialNumber
#        CalibrationDate 26-Apr-2010 CalibrationDate
#        UseG_J 1 UseG_J
#        A 4.33254179e-003 A
#        B 6.34742502e-004 B
#        C 2.08458165e-005 C
#        D 1.83956740e-006 D
#        F0_Old 1000.000 F0_Old
#        G 4.33235170e-003 G
#        H 6.34536082e-004 H
#        I 2.08144943e-005 I
#        J 1.83816873e-006 J
#        F0 1000.000 F0
#        Slope 1.00000000 Slope
#        Offset 0.0000 Offset
#      TemperatureSensor
#    sensor
#    sensor Channel="5"
#      !-- Frequency 4, Conductivity, 2 --
#      ConductivitySensor SensorID="3"
#        SerialNumber 1880 SerialNumber
#        CalibrationDate 11-Mar-10 CalibrationDate
#        UseG_J 1 UseG_J
#        !-- Cell const and series R are applicable only for wide range sensors. --
#        SeriesR 0.0000 SeriesR
#        CellConst 2000.0000 CellConst
#        Coefficients equation="0"
#          A 0.00000000e+000 A
#          B 0.00000000e+000 B
#          C 0.00000000e+000 C
#          D 0.00000000e+000 D
#          M 0.0 M
#          CPcor -9.57000000e-008 CPcor
#        Coefficients
#        Coefficients equation="1"
#          G -4.13035335e+000 G
#          H 5.04469106e-001 H
#          I -6.68952597e-004 I
#          J 5.84538832e-005 J
#          CPcor -9.57000000e-008 CPcor
#          CTcor 3.2500e-006 CTcor
#        Coefficients
#        Slope 1.00000000 Slope
#        Offset 0.00000 Offset
#      ConductivitySensor
#    sensor
#    sensor Channel="6"
#      !-- A/D voltage 0, Transmissometer, Chelsea/Seatech/Wetlab CStar --
#      TransChelseaSeatechWetlabCStarSensor SensorID="59"
#        SerialNumber CTS492DR SerialNumber
#        CalibrationDate 1 MARCH 2010 CalibrationDate
#        M 19.3810 M
#        B -1.1630 B
#        PathLength 0.250 PathLength
#      TransChelseaSeatechWetlabCStarSensor
#    sensor
#    sensor Channel="7"
#      !-- A/D voltage 1, Oxygen, SBE 43 --
#      OxygenSensor SensorID="38"
#        SerialNumber 0255 SerialNumber
#        CalibrationDate May, 10 2010 CalibrationDate
#        Use2007Equation 1 Use2007Equation
#        CalibrationCoefficients equation="0"
#          !-- Coefficients for Owens-Millard equation. --
#          Boc 0.0000 Boc
#          Soc 0.0000e+000 Soc
#          offset 0.0000 offset
#          Pcor 0.00e+000 Pcor
#          Tcor 0.0000 Tcor
#          Tau 0.0 Tau
#        CalibrationCoefficients
#        CalibrationCoefficients equation="1"
#          !-- Coefficients for Sea-Bird equation - SBE calibration in 2007 and later. --
#          Soc 0.5762 Soc
#          offset -0.5123 offset
#          A -3.4352e-003 A
#          B 1.1172e-004 B
#          C -2.1729e-006 C
#          D0 2.5826e+000 D0
#          D1 1.9263e-004 D1
#          D2 -4.6480e-002 D2
#          E 3.6000e-002 E
#          Tau20 2.1100 Tau20
#          H1 -3.3000e-002 H1
#          H2 5.0000e+003 H2
#          H3 1.4500e+003 H3
#        CalibrationCoefficients
#      OxygenSensor
#    sensor
#    sensor Channel="8"
#      !-- A/D voltage 2, Fluorometer, Seapoint --
#      FluoroSeapointSensor SensorID="11"
#        SerialNumber SCF 3004 SerialNumber
#        CalibrationDate CalibrationDate
#        !-- The following is an array index, not the actual gain setting. --
#        GainSetting 1 GainSetting
#        Offset 0.000 Offset
#      FluoroSeapointSensor
#    sensor
#    sensor Channel="9"
#      !-- A/D voltage 3, PAR/Irradiance, Biospherical/Licor --
#      PAR_BiosphericalLicorChelseaSensor SensorID="42"
#        SerialNumber 4506 SerialNumber
#        CalibrationDate 8/28/08 CalibrationDate
#        M 1.00000000 M
#        B 0.00000000 B
#        CalibrationConstant 422000000000.00000000 CalibrationConstant
#        Multiplier 1.00000000 Multiplier
#        Offset -0.28658200 Offset
#      PAR_BiosphericalLicorChelseaSensor
#    sensor
#    sensor Channel="10"
#      !-- A/D voltage 4, Altimeter --
#      AltimeterSensor SensorID="0"
#        SerialNumber 1055 SerialNumber
#        CalibrationDate 05/15/2003 CalibrationDate
#        ScaleFactor 15.000 ScaleFactor
#        Offset 0.000 Offset
#      AltimeterSensor
#    sensor
#    sensor Channel="11"
#      !-- A/D voltage 5, Free --
#    sensor
#    sensor Channel="12"
#      !-- A/D voltage 6, User Polynomial --
#      UserPolynomialSensor SensorID="61"
#        SerialNumber UVP2 SerialNumber
#        CalibrationDate CalibrationDate
#        SensorName UVP SensorName
#        A0 0.00000000 A0
#        A1 1.00000000 A1
#        A2 0.00000000 A2
#        A3 0.00000000 A3
#      UserPolynomialSensor
#    sensor
#    sensor Channel="13"
#      !-- A/D voltage 7, Free --
#    sensor
#    sensor Channel="14"
#      !-- SPAR voltage, Unavailable --
#    sensor
#    sensor Channel="15"
#      !-- SPAR voltage, SPAR/Surface Irradiance --
#      SPAR_Sensor SensorID="51"
#        SerialNumber 6367 SerialNumber
#        CalibrationDate 08/28/08 CalibrationDate
#        ConversionFactor 0.00000000 ConversionFactor
#        RatioMultiplier 0.00000000 RatioMultiplier
#      SPAR_Sensor
#    sensor
# Sensors
# datcnv_date = Jul 19 2010 08:22:18, 7.20b
# datcnv_in = C:CTDCheckley�35.hex C:CTDCheckley�35.CON
# datcnv_ox_hysteresis_correction = yes
# datcnv_ox_tau_correction = yes
# datcnv_bottle_scan_range_source = scans marked with bottle confirm bit, -4, 4
# datcnv_scans_per_bottle = 97
# bottlesum_date = Dec 12 2011 11:07:24, 7.20g
# bottlesum_in = C:Documents and SettingsjforrestbaldiniDesktopCheckleyprocessed�35.ros C:Documents and SettingsjforrestbaldiniDesktopNH1008-R1_v2_jfb.con

Data Processing Description

BCO-DMO Processing Notes
- Awk written to reformat original .btl files contributed by Jessica Forrest-Baldini
- AWK: NewHorizon_CTDbtl_2_BCODMO.awk

Data Files

File
CTD_Bottle.csv (Comma Separated Values (.csv), 130.89 KB) MD5:01b20cad9d058989e0ab3e4bae0d08ff Primary data file for dataset ID 3715

More Information about this dataset

Funding Sources

Funding Source	Award Number
NSF Division of Ocean Sciences	OCE-0927863
NSF Division of Ocean Sciences	OCE-0928139
NSF Division of Ocean Sciences	OCE-0928425

Deployments

Deployment	Synonyms	Start Date	Platform	Investigator
NH1008	GATEKEEPERS	2010-07-08	R/V New Horizon	David M. Checkley (Chief Scientist)	data info

Instruments

CTD Sea-Bird SBE 911plus

Supplied Description:

* Sea-Bird SBE 9 Data File:

* FileName = C:CTDCheckley

Instrument Type

Generic Name: CTD Sea-Bird SBE 911plus

Acronym: CTD SBE 911plus

Community Identifier: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0058/

Generic Description:

The Sea-Bird SBE 911 plus is a type of CTD instrument package for continuous measurement of conductivity, temperature and pressure. The SBE 911 plus includes the SBE 9plus Underwater Unit and the SBE 11plus Deck Unit (for real-time readout using conductive wire) for deployment from a vessel. The combination of the SBE 9 plus and SBE 11 plus is called a SBE 911 plus. The SBE 9 plus uses Sea-Bird's standard modular temperature and conductivity sensors (SBE 3 plus and SBE 4). The SBE 9 plus CTD can be configured with up to eight auxiliary sensors to measure other parameters including dissolved oxygen, pH, turbidity, fluorescence, light (PAR), light transmission, etc.). more information from Sea-Bird Electronics

Niskin bottle

Supplied Description:

Instrument Type

Generic Name: Niskin bottle

Community Identifier: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0412/

Generic Description:

A Niskin bottle (a next generation water sampler based on the Nansen bottle) is a cylindrical, non-metallic water collection device with stoppers at both ends. The bottles can be attached individually on a hydrowire or deployed in 12, 24, or 36 bottle Rosette systems mounted on a frame and combined with a CTD. Niskin bottles are used to collect discrete water samples for a range of measurements including pigments, nutrients, plankton, etc.

Parameters

Date and time formats are described in python strftime() syntax.

Supplied Name	Supplied description	Supplied Units	Standard Name
CTD_Cast	CTD Cast Number/Id	Dimensionless	cast
ISO_DateTime_UTC	CTD Date/Time from Header File (UTC) ISO formatted	YYYY-MM-DDTHH:MM:SS.xxZ	ISO_DateTime_UTC
Date	CTD Date from Header File (UTC)	YYYYMMDD	date
Time	CTD Time from Header File (UTC)	HHMMSS	time
Latitude	CTD Latitude from Header File (South is negative)	decimal degrees	lat
Longitude	CTD Longitude from Header File (West is negative)	decimal degrees	lon
Depth	CTD Max depth	meters	depth
Bottle_Position	Bottle Position	Dimensionless	bottle
ISO_DateTime_UTC_Bottle	Bottle Date/Time (UTC) ISO formatted	YYYY-MM-DDTHH:MM:SS.xxZ	ISO_DateTime_UTC
Date_Bottle	Bottle Date (UTC)	YYYYMMDD	date
Time_Bottle	Bottle Time (UTC)	HHMMSS	time
Sigma_e00	Density sigma-theta	Kg/m^3	sigma_theta
Sal00	Salinity Practical	PSU	sal
Sal11	Salinity Practical 2	PSU	sal
PrDM_avg	Pressure Digiquartz Average	db	press
PrDM_sdev	Pressure Digiquartz SDev	db	no_bcodmo_term
PrDM_min	Pressure Digiquartz Minimum	db	no_bcodmo_term
PrDM_max	Pressure Digiquartz Maximum	db	no_bcodmo_term
T090C_avg	Temperature ITS-90 Average	deg C	temp
T090C_sdev	Temperature ITS-90 Sdev	deg C	no_bcodmo_term
T090C_min	Temperature ITS-90 Minimum	deg C	no_bcodmo_term
T090C_max	Temperature ITS-90 Maximum	deg C	no_bcodmo_term
T190C_avg	Temperature 2 ITS-90 Average	deg C	temp
T190C_sdev	Temperature 2 ITS-90 Sdev	deg C	no_bcodmo_term
T190C_min	Temperature 2 ITS-90 Minimum	deg C	no_bcodmo_term
T190C_max	Temperature 2 ITS-90 Maximum	deg C	no_bcodmo_term
C0mS_cm_avg	Conductivity Average	mS/cm	cond
C0mS_cm_sdev	Conductivity Sdev	mS/cm	no_bcodmo_term
C0mS_cm_min	Conductivity Minimum	mS/cm	no_bcodmo_term
C0mS_cm_max	Conductivity Maximum	mS/cm	no_bcodmo_term
C1mS_cm_avg	Conductivity 2 Average	mS/cm	cond
C1mS_cm_sdev	Conductivity 2 Sdev	mS/cm	no_bcodmo_term
C1mS_cm_min	Conductivity 2 Minimum	mS/cm	no_bcodmo_term
C1mS_cm_max	Conductivity 2 Maximum	mS/cm	no_bcodmo_term
Bat_avg	Beam Attenuation Chelsea/Seatech/WET Labs CStar Average	1/m	beam_cp
Bat_sdev	Beam Attenuation Chelsea/Seatech/WET Labs CStar Sdev	1/m	no_bcodmo_term
Bat_min	Beam Attenuation Chelsea/Seatech/WET Labs CStar Minimum	1/m	no_bcodmo_term
Bat_max	Beam Attenuation Chelsea/Seatech/WET Labs CStar Maximum	1/m	no_bcodmo_term
Sbeox0ML_L_avg	Oxygen SBE 43 Average	ml/l	O2
Sbeox0ML_L_sdev	Oxygen SBE 43 Sdev	ml/l	no_bcodmo_term
Sbeox0ML_L_min	Oxygen SBE 43 Minimum	ml/l	no_bcodmo_term
Sbeox0ML_L_max	Oxygen SBE 43 Maximum	ml/l	no_bcodmo_term
FlSP_avg	Fluorescence Seapoint Average	nd	fluor
FlSP_sdev	Fluorescence Seapoint Sdev	nd	no_bcodmo_term
FlSP_min	Fluorescence Seapoint Minimum	nd	no_bcodmo_term
FlSP_max	Fluorescence Seapoint Maximum	nd	no_bcodmo_term
Par_avg	PAR/Irradiance Biospherical/Licor Average	nd	PAR
Par_sdev	PAR/Irradiance Biospherical/Licor Sdev	nd	no_bcodmo_term
Par_min	PAR/Irradiance Biospherical/Licor Minimum	nd	no_bcodmo_term
Par_max	PAR/Irradiance Biospherical/Licor Maximum	nd	no_bcodmo_term
Spar_avg	SPAR/Surface Irradiance Average	nd	SPAR
Spar_sdev	SPAR/Surface Irradiance Sdev	nd	no_bcodmo_term
Spar_min	SPAR/Surface Irradiance Minimum	nd	no_bcodmo_term
Spar_max	SPAR/Surface Irradiance Maximum	nd	no_bcodmo_term
Upoly0_avg	Upoly 0 UVP Average	Nephelometric Turbidity Units (NTU)	turbidity
Upoly0_sdev	Upoly 0 UVP Sdev	Nephelometric Turbidity Units (NTU)	no_bcodmo_term
Upoly0_min	Upoly 0 UVP Minimum	Nephelometric Turbidity Units (NTU)	no_bcodmo_term
Upoly0_max	Upoly 0 UVP Maximum	Nephelometric Turbidity Units (NTU)	no_bcodmo_term
AltM_avg	Altimeter Average	meters	altitude
AltM_sdev	Altimeter Sdev	meters	no_bcodmo_term
AltM_min	Altimeter Minimum	meters	no_bcodmo_term
AltM_max	Altimeter Maximum	meters	no_bcodmo_term

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Dataset: CTD - Bottle Summary