Dinitrogen fixation (N2fix) rates and nifH community structure from in situ 15N2 Gas Array from R/V Kilo Moana KM1016, KM1110 in the North Pacific Subtropical Gyre near Station ALOHA from 2010-2011 (DIAZOTROPHS-CO2 project)

Website: https://www.bco-dmo.org/dataset/4017
Version: 22 August 2013
Version Date: 2013-08-22

Project
» Oceanic diazotroph community structure and activities in a high carbon dioxide world (DIAZOTROPHS-CO2)

Program
» Ocean Carbon and Biogeochemistry (OCB)
ContributorsAffiliationRole
Church, Matthew J.University of Hawai'i (UH)Principal Investigator
Letelier, RicardoOregon State University (OSU-CEOAS)Co-Principal Investigator
Chandler, Cynthia L.Woods Hole Oceanographic Institution (WHOI BCO-DMO)BCO-DMO Data Manager


Dataset Description

Assessments of fixation rates of Rates of 15N2 and cyanobacterial nifH gene dynamics from In situ
15N2 Gas Array near station ALOHA deployed during KM1016 and KM1110.


Methods & Sampling

Rates of 15N2 fixation were assessed using the 15N isotopic tracer technique.  Whole seawater samples from six discrete depths (5, 25, 45, 75, 100, and 125 m) were withdrawn into acid-washed duplicate 4.3 L polycarbonate bottles and sealed with caps fitted with a silicone septa. Three mL of 15N2 gas (98 %; Isotech Laboratories ©) was injected into each polycarbonate bottle through the silicone septum using a gas-tight syringe fitted with a stainless steel needle. The bottles were attached to a free drifting array, deployed before dawn and incubated at in situ light and temperature for ~24 hours.  After recovery of the array, the entire volume of each bottle was filtered onto pre-combusted glass microfiber (GF/F) filters (25 mm diameter) for whole seawater N2-fixation estimates.  All GF/F filters were placed on combusted foil pieces in Petri dishes and stored frozen at -20 °C for transport.


Data Processing Description


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Data Files

File
N2fix_array.csv
(Comma Separated Values (.csv), 4.05 KB)
MD5:b30082649dc182d9908e99e3d1c10839
Primary data file for dataset ID 4017

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Parameters

ParameterDescriptionUnits
cruise_id

Cruise Id

text
sta

Station Id

integer
date

date sampling began

YYYYMMDD
time

time sampling began

hhmm
lon

longitude; negative denotes West

decimal degrees
lat

latitude; negative denotes South

decimal degrees
depth

depth of measurement

meters
year

Year of sample

YYYY
month

month of sample

MM
day

day of sample

DD
N2fix_mean

Mean dinitrogen fixation rate (mean from num_obs.) bd = below detection

nanomol N/liter/day
N2fix_diff

Difference in dinitrogen fixation rate using N2fix_num_obs samples.

nanomol N/liter/day
PP_mean

Primary production mean derived from num_obs samples.

bd = below detection

micrograms/liter/day
PP_std_dev

Standard deviation between Primary Production samples using PP_num_obs samples.

micrograms/liter/day
N2fix_num_obs

number of samples used in calculation of dinitrogen fixation rate mean (N2fix_mean) and difference (N2fix_std_dev.)

integer
PP_num_obs

number of samples used in calculation of Primary Production mean (PP_mean) and standard deviation (PP_std_dev.)

integer
leuc_3H_light_incorp_mean

3H-leucine (Light) incorporations rates in picomoles Leucine(Light) per liter per hour

picomole/liter/hour
leuc_3H_dark_incorp_mean

Mean 3H-Leucine (Dark) incorporation rates in picomoles Leucine (Dark) per liter hour using Leucine_3H_Dark_num_obs samples.

picomole/liter/hour
leuc_3H_light_incorp_diff

Standard deviation between leuc_3H_num_obs samples of 3H-Leucine (light) incorporation rate.

picomole/liter/hour
leuc_3H_dark_incorp_diff

Standard deviation between leuc_3H_num_obs samples of 3H-Leucine (dark) incorporation rate.

picomole/liter/hour
leuc_3H_light_num_obs

Number of observations used in calculation of leuc_3H_light_incorp mean and standard deviation.

integer
leuc_3H_dark_num_obs

Number of observations used in calculation of leuc_3H_dark_incorp mean and standard deviation.

integer


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Instruments

Dataset-specific Instrument Name
Mass Spectrometer
Generic Instrument Name
Mass Spectrometer
Generic Instrument Description
General term for instruments used to measure the mass-to-charge ratio of ions; generally used to find the composition of a sample by generating a mass spectrum representing the masses of sample components.


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Deployments

KM1016

Website
Platform
R/V Kilo Moana
Report
Start Date
2010-08-20
End Date
2010-08-30
Description
Cruise information and original data are available from the NSF R2R data catalog.

KM1110

Website
Platform
R/V Kilo Moana
Report
Start Date
2011-03-12
End Date
2011-03-23


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Project Information

Oceanic diazotroph community structure and activities in a high carbon dioxide world (DIAZOTROPHS-CO2)


The North Pacific Subtropical Gyre (NPSG) is the largest ocean ecosystem on Earth, playing a prominent role in global carbon cycling and forming an important reservoir of marine biodiversity. Nitrogen (N2) fixing bacteria (termed diazotrophs) provide a major source of new nitrogen to the oligotrophic waters of the NPSG, thereby exerting direct control on the carbon cycle. Oceanic uptake of CO2 causes long-term changes in the partial pressure of CO2 (pCO2) in the seawater of this ecosystem. Therefore, understanding how carbon system perturbations may influence ocean biogeochemistry is an important and timely undertaking.

In this project, the investigators will examine how natural assemblages of N2 fixing microorganisms respond to perturbations in seawater carbon chemistry. Laboratory and field-based experiments will be placed in the context of monthly time series measurements on the activities and abundances of N2 fixing microorganism abundances. Together, the project will provide insight into the dependence of N2 fixing microorganism physiology on variations in CO2. The broad objectives of the research are: (1) Quantify the responses and consequences of changes in seawater pCO2 on the growth and community structure of naturally-occurring assemblages of ocean diazotrophs; (2) Identify why and how changes in seawater pCO2 influence the growth and carbon acquisition strategies of two model marine diazotrophs (Trichodesmium and Crocosphaera); and (3) Quantify temporal variability in diazotroph community structure and activities at Station ALOHA.

This is a Collaborative Research award.



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Program Information

Ocean Carbon and Biogeochemistry (OCB)


Coverage: Global


The Ocean Carbon and Biogeochemistry (OCB) program focuses on the ocean's role as a component of the global Earth system, bringing together research in geochemistry, ocean physics, and ecology that inform on and advance our understanding of ocean biogeochemistry. The overall program goals are to promote, plan, and coordinate collaborative, multidisciplinary research opportunities within the U.S. research community and with international partners. Important OCB-related activities currently include: the Ocean Carbon and Climate Change (OCCC) and the North American Carbon Program (NACP); U.S. contributions to IMBER, SOLAS, CARBOOCEAN; and numerous U.S. single-investigator and medium-size research projects funded by U.S. federal agencies including NASA, NOAA, and NSF.

The scientific mission of OCB is to study the evolving role of the ocean in the global carbon cycle, in the face of environmental variability and change through studies of marine biogeochemical cycles and associated ecosystems.

The overarching OCB science themes include improved understanding and prediction of: 1) oceanic uptake and release of atmospheric CO2 and other greenhouse gases and 2) environmental sensitivities of biogeochemical cycles, marine ecosystems, and interactions between the two.

The OCB Research Priorities (updated January 2012) include: ocean acidification; terrestrial/coastal carbon fluxes and exchanges; climate sensitivities of and change in ecosystem structure and associated impacts on biogeochemical cycles; mesopelagic ecological and biogeochemical interactions; benthic-pelagic feedbacks on biogeochemical cycles; ocean carbon uptake and storage; and expanding low-oxygen conditions in the coastal and open oceans.



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Funding

Funding SourceAward
NSF Division of Ocean Sciences (NSF OCE)

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