Salinity measurements from Niskin bottle samples at the PICO time-series station (34.7181 deg N, 76.6707 deg W) from 2010-2012 (PICO project)

Website: https://www.bco-dmo.org/dataset/4035
Version: 03 Sept 2013
Version Date: 2013-09-03

Project
» Pivers Island Coastal Observatory (PICO)
ContributorsAffiliationRole
Johnson, Zackary I.Duke UniversityPrincipal Investigator, Contact
Hunt, DanaDuke UniversityCo-Principal Investigator
Rauch, ShannonWoods Hole Oceanographic Institution (WHOI BCO-DMO)BCO-DMO Data Manager


Dataset Description

Salinity measured at the Pivers Island Coastal Observatory (PICO) from 2010 to 2012.

Note: Salinity was not measured at all time points, thus, some dates have no data ('nd') in the salinity columns.


Methods & Sampling

Water was sampled using a 5 L niskin bottle centered at 1 m with a bottle length of 0.7 m. Salinity was measured using a calibrated handheld digital refractometer (Atago PAL-06S), using a refractometer (Vista A366ATC), or using a Guideline Portasal 8410A all according to manufacturer’s instructions and calibrated against known reference materials.


Data Processing Description

Quality Scores (qflag) as follows:
1 = excellent (no known issues),
2 = suspect,
3 = poor (known reason to suspect data).

BCO-DMO Processing Notes:
- Created 'replicate' column and re-arranged data so that replicates are in rows, not columns.
- Modified parameter names to conform with BCO-DMO naming conventions.
- Replaced blanks with 'nd' to indicate 'no data'.
- Separated date into month, day, and year columns.


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Data Files

File
salinity.csv
(Comma Separated Values (.csv), 56.42 KB)
MD5:e282269c39bc6febe761486c5847e21b
Primary data file for dataset ID 4035

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Parameters

ParameterDescriptionUnits
deployment

Deployment name/id number.

text
lat

Latitude of sampling location. Positive = North.

decimal degrees
lon

Longitude of sampling location. Positive = East.

decimal degrees
year

Year (local time) of the sampling event.

YYYY
month_local

Month (local time) when the sampling event occurred.

mm (01 to 12)
PID_num

Unique, sequential "occupation" number for sampling. (The unique time/day when sampling occurred.)

dimensionless
day_local

Day of month (local time) when the sampling event occurred.

dd (01 to 31)
time_local

Time (local) when the sampling event occurred; 24-hour clock.

HHMM.mm
time_qflag

Quality score for time_local:

1 = excellent (no known issues);

2 = suspect;

3 = poor (known reason to suspect data).

dimensionless
depth

Depth of water sampling.

meters
replicate

Replicate identifier. (All of the "A" salinity samples are from the same bottle, however "A" replicates for salinity are unrelated

to "A" replicates in the other PICO datasets.)

text
sal_Atago

Salinity measured using a calibrated handheld digital refractometer (Atago PAL-06S).

sal_Atago_qflag

Quality score for sal_Atago:

1 = excellent (no known issues);

2 = suspect;

3 = poor (known reason to suspect data).

dimensionless
sal_SpyGlass

Salinity measured using a refractometer (Vista A366ATC).

yrday

Consecutive day of year for a specified year, as a decimal. The fraction of the value represents the time within the day (e.g. a value of 1.5 means January 1 at 1200 hours).

dimensionless
ISO_DateTime_Local

Date-time (local) formatted to ISO 8601 standard.

YYYY-MM-DDTHH:MM:SS.ss


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Instruments

Dataset-specific Instrument Name
Refractometer
Generic Instrument Name
Refractometer
Dataset-specific Description
Salinity was measured using a calibrated handheld digital refractometer (Atago PAL-06S) or using a refractometer (Vista A366ATC).
Generic Instrument Description
A refractometer is a laboratory or field device for the measurement of an index of refraction (refractometry). The index of refraction is calculated from Snell's law and can be calculated from the composition of the material using the Gladstone-Dale relation. In optics the refractive index (or index of refraction) n of a substance (optical medium) is a dimensionless number that describes how light, or any other radiation, propagates through that medium.


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Deployments

PICO_1-301

Website
Platform
Duke University Marine Lab
Start Date
2010-06-28
End Date
2012-06-26
Description
The PICO time series is sampled weekly (or more frequently) to capture physical, chemical and biological variability in the coastal ocean. This time series enables the investigator to collaborate with a number of researchers and will serve as a long-term research focus. Project information: http://oceanography.ml.duke.edu/johnson/research/pico/


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Project Information

Pivers Island Coastal Observatory (PICO)


Coverage: 34.7181 deg N, 76.6707 deg W


From the project website:
Carbon dioxide is rising at ~3% per year in the atmosphere and oceans leading to increases in dissolved inorganic carbon and a reduction in pH. This trend is expected to continue for the foreseeable future and ocean pH is predicted to decrease substantially making the ocean more acidic, potentially affecting the marine ecosystem. However, coastal estuaries are highly dynamic systems that often experience dramatic changes in environmental variables over short periods of times. In this study, the investigators are measuring key variables of the marine carbon system along with other potential forcing variables and characteristics of the ecosystem that may be affected by these pH changes. The goal of this project is to determine the time-scales and magnitude of natural variability that will be superimposed on any long term trends in ocean chemistry.

Other PICO-related projects in BCO-DMO:
Ocean Acidification: microbes as sentinels of adaptive responses to multiple stressors: contrasting estuarine and open ocean environments

Collaborative Research: BoCP-Design: A multidomain microbial consortium to interrogate organic matter decomposition in a changing ocean

NSF2026: EAGER: Identifying microbes’ population-level environmental responses using Bayesian modeling



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Funding

Funding SourceAward
NSF Division of Ocean Sciences (NSF OCE)
NSF Ocean Sciences Research Initiation Grants (NSF OCE-RIG)

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