Dataset: Illumina MiSeq amplicons of the V4 hyper variable region of 16S rRNA gene from IODP Expedition 336 on R/V JOIDES Resolution in the Mid-Atlantic Ridge in 2011 (North Pond basalts project)

ValidatedFinal no updates expectedVersion 07 Feb 2016 (2016-02-07)Dataset Type:experimental

Principal Investigator: Beth N. Orcutt (Bigelow Laboratory for Ocean Sciences)

BCO-DMO Data Manager: Shannon Rauch (Woods Hole Oceanographic Institution)


Program: International Ocean Discovery Program (IODP)

Program: Center for Dark Energy Biosphere Investigations (C-DEBI)

Project: IODP Expedition 336 Objective Research: The deep biosphere of young and oxic oceanic crust (North Pond basalts)

This dataset contains Illumina MiSeq amplicons of the V4 hyper variable region of 16S rRNA gene. Raw data have been deposited in the NCBI Sequence Read Archive under accession number SRP068428.

Additional data files:
(1) FASTA-formatted quality-controlled 16s rRNA gene sequences, organized by name of the operational taxonomic unit (OTU): X336_DataReport_Supplemental_filteredOTUs.fasta
(2) Excel file containing a record of the abundance of each OTU in each sample, organized by the name of the IODP Expedition 336 sample, along with the taxonomy of the OTU (based on classification as described in methods) and the closest environmental relative as identified using NCBI's BLAST algorithm (as described in methods): X336_DataReport_Supplemental_SequenceAbundance.xlsx


Related Datasets

No Related Datasets

Related Publications

No Related Publications