This dataset includes microbial Salinispora strains and co-occurring bacteria found in samples from WS1209, their associated collection information, and links to GenBank accession pages. The collections were made from sediments off of Yucatan in the Mexican Caribbean Sea. Bacteria were cultured from marine sediments and identified based on 16S sequence analysis.
Coordinates (this study) or year of isolation are given for each strain, as well as sample depth if known. BC stands for Banco Chinchorro, which divided into North (N), Middle (M), and South (S) locations.
The following are also flagged in the data:
* Genome sequence available.
+ Strains used in secondary assays to determine the temporal onset of antagonism.
Related Reference:
Patin,NV; Duncan,KR; Dorrestein,PC; Jensen,PR. (2012) Competitive strategies differentiate closely related species of marine actinobacteria. ISME J 10:478-490. doi:10.1038/ismej.2015.128
Jensen, P., Rouse, G. (2016) Microbial culture collection, strain IDs, locations and depths R/V F.G. Walton Smith (WS1209) cruise in the Yucatan Carribean and Mexico during 2012 (CEMSB project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 2016-01-19) Version Date 2016-01-19 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/632875 [access date]
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