Dataset: Symbiodinium species and relative abundance in Dendrogyra cylindrus from 3 regions of the Florida Reef Tract, 2015-2016 (EMUCoReS project)

This dataset has not been validatedPreliminary and in progressVersion (2017-05-17)Dataset Type:Other Field ResultsDataset Type:experimental

Principal Investigator: Dr Mauricio Rodriguez-Lanetty (Florida International University)

Co-Principal Investigator: Dr Diego Lirman (University of Miami Rosenstiel School of Marine and Atmospheric Science)

Co-Principal Investigator: Dr Laurie Richardson (Florida International University)

BCO-DMO Data Manager: Nancy Copley (Woods Hole Oceanographic Institution)

Project: RAPID: A hyper-thermal anomaly in the Florida Reef Tract: An opportunity to explore the mechanisms underpinning patterns of coral bleaching and disease (EMUCoReS)

Cite Dataset

This dataset includes the relative abundance of Dendrogyra cylindrus which were analyzed for 23S on an Illumina platform from three sites in the Florida Reef Tract, one each in the upper, middle and lower Keys in 2015-2016.

Related Datasets

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Related Publications

Methods
Kemp, D. W., Fitt, W. K., & Schmidt, G. W. (2007). A microsampling method for genotyping coral symbionts. Coral Reefs, 27(2), 289–293. doi:10.1007/s00338-007-0333-8
Methods
Santos, S. R., Gutierrez-Rodriguez, C., & Coffroth, M. A. (2003). Phylogenetic identification of symbiotic dinoflagellates via length heteroplasmy in Domain V of chloroplast Large Subunit (cp23S)-Ribosomal DNA Sequences. Marine Biotechnology, 5(2), 130–140. doi:10.1007/s10126-002-0076-z
Software
Schloss, P. D., Westcott, S. L., Ryabin, T., Hall, J. R., Hartmann, M., Hollister, E. B., … Weber, C. F. (2009). Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities. Applied and Environmental Microbiology, 75(23), 7537–7541. doi:10.1128/aem.01541-09

Rodriguez-Lanetty, M., Richardson, L., Lirman, D. (2017) Symbiodinium species and relative abundance in Dendrogyra cylindrus from 3 regions of the Florida Reef Tract, 2015-2016 (EMUCoReS project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version ) Version Date 2017-05-17 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/700149 [access date]

Terms of Use

This dataset is licensed under Creative Commons Attribution 4.0.


If you wish to use this dataset, it is highly recommended that you contact the original principal investigators (PI). Should the relevant PI be unavailable, please contact BCO-DMO (info@bco-dmo.org) for additional guidance. For general guidance please see the BCO-DMO Terms of Use document.

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Funded by the U.S. National Science Foundation