Table of Contents

• Coverage
• Dataset Description
  • Methods & Sampling
  • Data Processing Description
• Data Files
• Parameters
• Instruments
• Deployments
• Project Information
• Funding

This dataset includes temperature, salinity, pressure, depth, sigma-theta density, PAR, fluorescence, and dissolved oxygen from CTD profiles collected during the R/V Point Sur cruise PS13-12 between 2013-06-27 2013-07-05.

The data are available by clicking the "Get Data" button on this page.

Original .asc files submitted to BCO-DMO are available for download as a zip file: 
CTD profile .asc files (268 KB ZIP, 914 KB uncompressed) 
* The "BCO-DMO Data Manager Processing Notes" in the Processing section of this page do not apply to these originally submitted .asc files
 

Multiple hydrocasts were conducted at stations using a SeaBird CTD with redundant sensors for temperature and conductivity; the instrument package was owned and operated by the R/V Point Sur (Moss Landing Marine Laboratories, Moss Landing, California).  Prior to the cruise, the transmissometer was not calibrated and many data anomalies were observed; therefore, transmissometer data are suspect.

All hydrocast data was processed to1-m bins. 

BCO-DMO Data Manager Processing Notes:
* added a conventional header with dataset name, PI name, version date
* modified parameter names to conform with BCO-DMO naming conventions
* blank values replaced with no data value 'nd'
* added ISO DateTime UTC which was generated from Date and Time values
* special characters in data parameter names replaced
* changed precision %.3 except Spar %.2f
* used date/time local and zulu, lat, lon, cast number from provided event log
* added comment "redo cast 3 as there were bad bottles" from bottle file comment
* changed column Cruise to Cruise_name
* added column Cruise with value PS13-12 to match other datasets

This study will examine the distribution of silica production among diatom species, using a novel combination of existing approaches, to evaluate the contributions of specific species or genera to total diatom silica production. Specific hypotheses regarding the distribution of silica production among species of diatoms will be tested by exploiting the strong contrasts in diatom community structure and silica production between a coastal upwelling system and in an oligotrophic subtropical gyre. Several lines of evidence support the idea that the diatoms responsible for the majority of silica production shifts from the most numerically abundant species in coastal systems to relatively rare, but very large, cells in offshore oligotrophic environments. This shift alters the role of diatoms in regional food webs and because many processes determining the role of phytoplankton groups in biogeochemical cycles are a function of cell size, such a shift has strong implications for regional differences in the contribution of diatoms to upper-ocean carbon cycling and the biological pump. 

This study also seeks to understand of the role of silicon limitation in regulating diatom silica production at the species level. Si limitation of silica production has been detected in every system examined to date, ranging from the high Si waters of the Antarctic, to coastal upwelling systems and the oligotrophic subtropical gyres. Field studies of Si limitation are rarely accompanied by examination of the species present. When studies do have taxonomic data the lack of information on the performance of individual species makes it impossible to allocate the measured rates among cells, potentially leading to erroneous conclusions about the contribution of specific diatom groups to community composite rates.

The project will test five hypotheses. Each is related to the general theme of using species-specific data to improve understanding of the factors regulating diatoms' role in marine food webs. By combining bulk measures of silica production using the radioisotope 32Si with quantitative measures of silicon deposition rates by individual cells using the fluorescent probe 2-(4-pyridyl)-5((4-(2-dimethylaminoethyl-aminocarbamoyl)-methoxy)phenyl)oxazole, or PDMPO, the following will be determined: species-specific diatom contributions to total community silica production, regional differences in the distribution of silica production among diatom species as a function of cell size, species-specific kinetic parameters governing the ability of species to compete for dissolved silicon, and whether dominance of a particular diatom group or species can be explained by knowledge of their capacity to utilize Si and their numerical abundance (as opposed to other factors such as grazing or limitation by other nutrients).