Contributors | Affiliation | Role |
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Essington, Timothy | University of Washington (UW) | Principal Investigator, Contact |
Horne, John K. | University of Washington (UW) | Co-Principal Investigator |
Keister, Julie E. | University of Washington (UW) | Co-Principal Investigator |
Parker-Stetter, Sandra | Northwest Fisheries Science Center - Seattle (NOAA NWFSC) | Co-Principal Investigator |
York, Amber D. | Woods Hole Oceanographic Institution (WHOI BCO-DMO) | BCO-DMO Data Manager |
This dataset contains fish and jellyfish sample information from R/V Centennial trawl surveys in the Hood Canal, WA from 2012-2013. The sample number, length, weight, and species are included.
Sampling and analytical procedures:
Samples were chosen to target representative aggregations of fish as detected using multi-beam hydroacoustics. They are not designed to provide quantitative estimates of density, but rather to assess species and size composition and to collect individuals for tissue and stomach sampling. Net was a Marinovich midwater trawl, deployed using two wires and 2.5 meter FishBuster trawl doors. Trawl was fitted with a 3.2 mm knotless liner in the codend and towed at a vessel speed of 2−3 knots. Vertical opening of the trawl varied between 4.8 and 7.0 m.
Stomachs were dissected after euthanizing fish an overdose of MS-222. If samples were deemed to be empty at that point, they were not preserved. Otherwise, entire stomach was preserved in 90% ethanol. Some stomachs were inverted from barotrauma. These were not preserved and documented with an “I”.
BCO-DMO Data Manager Processing Notes:
* added a conventional header with dataset name, PI name, version date
* modified parameter names to conform with BCO-DMO naming conventions
* apostrophes deleted due to character restrictions
* NA changed to "nd" for "no data"
* Changed no sample taken indicator from blank to "N: for columns indicating whether isotope sample was taken or stomach contents examined.
File |
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SampleData.csv (Comma Separated Values (.csv), 292.69 KB) MD5:e94c404711bd128c1822e5d3823d5b35 Primary data file for dataset ID 718698 |
Parameter | Description | Units |
TrawlID | Unique identifier for each trawl deployment | unitless |
Month | Sample Cruise Month | unitless |
Year | Sample cruise year | unitless |
Diel | Day (D) or Night (N) sample | unitless |
Site | Sample site (A|B|C|D see SiteTable) | unitless |
Replicate | Unique identifier for tows conducted at same site / time period | unitless |
Species | Name of species or taxonomic group | unitless |
Length | Individual Fork length (herring) total length( all others) | millimeters (mm) |
SampleNo | Unique identifier if tissue or stomach or otolith sample was taken | unitless |
Mass_Kg | Mass of individual to the neares 0.01 Kg | kilograms (Kg) |
Stomach | Was stomach sample collected (Y); was stomach empty (E) or inverted (I); no sample examined (N) | unitless |
Isotope | Was tissue sample collected (Y) or not (N) | unitless |
Comments | Notes on samples | unitless |
Dataset-specific Instrument Name | Simrad GPS |
Generic Instrument Name | GPS receiver |
Dataset-specific Description | Vessel position measured using on board GPS (Simrad) |
Generic Instrument Description | Acquires satellite signals and tracks your location.
This term has been deprecated. Use instead: https://www.bco-dmo.org/instrument/560 |
Dataset-specific Instrument Name | Marinovich midwater trawl |
Generic Instrument Name | Midwater Trawl |
Generic Instrument Description | A mid-water or pelagic trawl is a net towed at a chosen depth in the water column to catch schooling fish such as herring and mackerel. Midwater trawl nets have very large front openings to herd schooling fish toward the back end where they become trapped in the narrow "broiler". The sides of the deployed net are spread horizontally with two large metal foils, called "doors," positioned in front of the net. As the trawler moves forward, the doors, and therefore the net, are forced outward, keeping the net open.
This instrument designation is used when specific make and model are not known. |
Dataset-specific Instrument Name | Kongsberg Marine P150 net monitor |
Generic Instrument Name | Water Depth Logger |
Dataset-specific Description | Trawl depth measured using Kongsberg Marine P150 net monitor. |
Generic Instrument Description | For measuring and recording water levels in rivers, streams, and wells. |
Website | |
Platform | R/V Centennial |
Start Date | 2012-06-11 |
End Date | 2013-10-03 |
Description | trawl surveys from 2012-2013 |
Description from NSF award abstract:
Low dissolved oxygen (hypoxia) is one of the most pronounced, pervasive, and significant disturbances in marine ecosystems. Yet, our understanding of the ecological impacts of hypoxia on pelagic food webs is incomplete because of our limited knowledge of how organism responses to hypoxia affect critical ecosystem processes. In pelagic food webs, distribution shifts of mesozooplankton and their predators may affect predator-prey overlap and dictate energy flow up food webs. Similarly, hypoxia may induce shifts in zooplankton community composition towards species that impede energy flow to planktivorous fish. However, compensatory responses by species and communities might negate these effects, maintaining trophic coupling and sustaining productivity of upper trophic level species. The PIs propose to answer the question "Does hypoxia affect energy flow from mesozooplankton to pelagic fish?" They approach this question with a nested framework of hypotheses that considers two sets of processes alternatively responsible for either changes or maintenance of pelagic ecosystem energy flows. They will conduct their study in the Hood Canal, WA. Unlike most hypoxia-impacted estuaries, hypoxic regions of Hood Canal are in close proximity to sites that are not affected. This makes it logistically easier to conduct a comparative study and reduces the number of potential confounding factors when comparing areas that are far apart.
Improved understanding of how hypoxia impacts marine ecosystems will benefit the practical application of ecosystem-based management (EBM) in coastal and estuarine ecosystems. Effective application of EBM requires that the impacts of human activities are well understood and that ecological effects can be tracked using indicators. This project will contribute to both of these needs. The PIs will share their findings on local and national levels with Federal, State, Tribal, and County biologists. To increase exposure of science to underrepresented groups, the PIs also will provide Native American youth with opportunities to participate in field collections and laboratory processing through summer internships. The PIs will collaborate with the NSF-funded Pacific Northwest Louis Stokes Alliance for Minority Participation and tribes from the Hood Canal region to recruit and mentor students for potential careers in marine science. This project will support several undergraduate researchers, two Ph.D. students, a post-doc, and two early-career scientists.
Funding Source | Award |
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NSF Division of Ocean Sciences (NSF OCE) |