Dataset: Angola weekly cholera incidence at the province level

Name: Angola weekly cholera incidence at the province level collected from 2016-02-13 to 2016-05-29 (Cholera_Disease_Dyn project)
Published: 2017-11-28
Keywords: biota

Cite This Dataset

Spatial Extent: N:-4.3726 E:24.0821 S:-18.0421 W:11.6792

Temporal Extent: 2016-02-13 - 2016-05-29

Project:

Modeling the Effects of Heterogeneity in Water Quality on Cholera Disease Dynamics (Cholera_Disease_Dyn)

Principal Investigator:

Professor Joseph Tien (Ohio State University)

Co-Principal Investigator:

Marisa C Eisenberg (University of Michigan)

Professor David N Fisman (University of Toronto, U of T)

BCO-DMO Data Manager:

Amber D. York (Woods Hole Oceanographic Institution, WHOI BCO-DMO)

Version Date:

2017-11-28

Restricted:

Validated:

Yes

Current State:

Final no updates expected

Angola weekly cholera incidence at the province level collected from 2016-02-13 to 2016-05-29 (Cholera_Disease_Dyn project)

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Description

This dataset includes weekly cholera incidence data collected by the Angola Ministry of Health and compiled by the World Health Organization Cholera Task Force collected at the province level from Feb. 13th to May 29th, 2016.

These data were published in:
Eisenberg M, Robertson SL, Tien JH (2013). Identifiability and estimation of multiple transmission pathways in cholera and waterborne disease. J. Theoretical Biology 324: 84-102. doi: 10.1016/j.jtbi.2012.12.021

Other relevant publication:

Lee EC et al (2017), Model distinguishability and inference robustness in mechanisms of cholera transmission and loss of immunity. J. Theoretical Biology 420: 68-81. doi: 10.1016/j.jtbi.2017.01.032

Methods & Sampling

Cholera incidence reported by the Angola Ministry of Health.

Data Processing Description

BCO-DMO Data Manager Processing Notes:
* added a conventional header with dataset name, PI name, version date
* modified parameter names to conform with BCO-DMO naming conventions (spaces and periods changed to underscores)

Data Files

File
angola_cholera.csv (Comma Separated Values (.csv), 1.19 KB) MD5:9d2b938d09a52f09937b272bc731235a Primary data file for dataset ID 719960

More Information about this dataset

Funding Sources

Funding Source	Award Number
NSF Division of Ocean Sciences	OCE-1115881

Deployments

None available yet

Instruments

None available yet

Parameters

Date and time formats are described in python strftime() syntax.

Supplied Name	Supplied description	Supplied Units	Standard Name
year_from	Starting year of weekly cholera incidence count in format yyyy	unitless	year
month_from	Starting month of weekly cholera incidence count in format mm	unitless	month
day_from	Starting day of weekly cholera incidence count in format dd	unitless	day
year_to	Ending year of weekly cholera incidence count in format yyyy	unitless	year
month_to	Ending month of weekly cholera incidence count in format mm	unitless	month
day_to	Ending day of weekly cholera incidence count in format dd	unitless	day
year_frac	Fractional year for stop date of the weekly incidence data in format yyyy + fraction of year (example: week ending on Jan 7, 2006 (the first week of the year) 1/52 = .019. So value would be 2006.019.	unitless	no_bcodmo_term
Bengo	Weekly cholera incidence count in Bengo province	count per incidence	count
Benguela	Weekly cholera incidence count in Benguela province	count per incidence	count
Bie	Weekly cholera incidence count in Bie province	count per incidence	count
K_Norte	Weekly cholera incidence count in Kuanza Norte province	count per incidence	count
K_Sul	Weekly cholera incidence count in Kuanza Sul province	count per incidence	count
Luanda	Weekly cholera incidence count in Luanda province	count per incidence	count
Huambo	Weekly cholera incidence count in Huambo province	count per incidence	count
Malange	Weekly cholera incidence count in Malange province	count per incidence	count
Namibe	Weekly cholera incidence count in Namibe province	count per incidence	count
Zaire	Weekly cholera incidence count in Zaire province	count per incidence	count
Huila	Weekly cholera incidence count in Huila province	count per incidence	count
Uige	Weekly cholera incidence count in Uige province	count per incidence	count
Cabinda	Weekly cholera incidence count in Cabinda province	count per incidence	count
TOTAL	Total weekly cholera incidence for all 13 provinces	count per incidence	count

Status message

Database

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Dataset: Angola weekly cholera incidence at the province level