Contributors | Affiliation | Role |
---|---|---|
Saito, Mak A. | Woods Hole Oceanographic Institution (WHOI) | Principal Investigator, Contact |
Santoro, Alyson E. | University of California-Santa Barbara (UCSB-LifeSci) | Co-Principal Investigator |
Ake, Hannah | Woods Hole Oceanographic Institution (WHOI BCO-DMO) | BCO-DMO Data Manager |
York, Amber D. | Woods Hole Oceanographic Institution (WHOI BCO-DMO) | BCO-DMO Data Manager |
R/V Falkor (160115) nutrient data from the ProteOMZ expedition in the Central Pacific in 2016.
Nutrient samples were filtered through 0.2 micron Supor filters and frozen in acid-washed 60-mL high-density polyethylene bottles until analysis. The frozen samples were thawed in a warm water bath and stored in the dark for 20– 24 h prior to analyses. This protocol has been found to increase the recovery efficiency of silicic acid in frozen samples and has no observed adverse effects on the other nutrients. Immediately before analysis, aliquots of the samples were transferred to 15-mL polypropylene cups and an Alpkem autosampler. Technicon AutoAnalyzer IITM components were used to measure phosphate and ammonium; and Alpkem rapid flow analyzer (RFA) 300TM components were used for silicic acid, nitrate + nitrite, and nitrite. All five of the macronutrients were analyzed simultaneously. The nutrient methods were essentially those employed by the Oregon State University lab during the World Ocean Circulation Experiment and Southern Ocean Joint Global Ocean Flux Study (JGOFS) cruises. The phosphate method was a modification of the molybdenum blue procedure of Bernhardt and Wilhelms (1967), in which phosphate was determined as reduced phosphomolybdic acid employing hydrazine as the reductant. The nitrate + nitrite analysis used the basic method of Armstrong et al. (1967). Sulfanilamide and N-(1-napthyl) ethylenediamine dihydrochloride react with nitrite to form a colored diazo compound. For the nitrate + nitrite analysis, nitrate is first reduced to nitrite using an open tubular cadmium reductor and imidazole buffer as described by Patton (1983). Nitrite analysis was performed on a separate channel, omitting the cadmium reductor and the buffer. The determination of silicic acid was based on that of Armstrong et al. (1967) as adapted by Atlas et al. (1971). Addition of an acidic molybdate reagent forms silicomolybdic acid, which is then reduced by stannous chloride. An indophenol blue ammonium method was modified from Alpkem RFA methodology, which references Methods for Chemical Analysis of Water and Wastes, March 1984, EPA-600/4-79-020, ‘‘Nitrogen Ammonia,’’ Method 350.1 (Colorimetric, Automated Phenate). A detailed description of the continuous segmented flow procedures used can be found in Gordon et al. (1994).
Data were collected using the Trace Metal Rosette (TMR, Sea-Bird SEACAT 19+), equipped standard conductivity, temperature and pressure sensors, as well as an added optional SBE 43 dissolved oxygen sensor. All four sensors were factory refurbished/calibrated immediately prior to the expedition in November of 2015 by Sea-Bird Electronics (Bellevue WA).
R/V Falkor CTD data are described at the R2R repository: http://www.rvdata.us/catalog/FK160115
BCO-DMO Data Processing Notes:
- reformatted column names to comply with BCO-DMO standards.
- added columns: cruise, date, lat, lon
File |
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nutrients.csv (Comma Separated Values (.csv), 32.86 KB) MD5:d263946cc53aa45afd5047b1a37a0ac7 Primary data file for dataset ID 730912 |
Parameter | Description | Units |
cruise | Deployment | unitless |
station | Station number | unitless |
date | Date of sampling; YYYY/MM/DD | unitless |
lat | Latitude | decimal degrees |
lon | Longitude | decimal degrees |
Depth | Depth of sampling | meters |
Sample | Sampler number | unitless |
PO4 | Phosphate | micromoles per liter |
N_N | Nitrate + Nitrite | micromoles per liter |
Silicate | Silicic acid | micromoles per liter |
NO2 | Nitrite | micromoles per liter |
NH4 | Ammonia | micromoles per liter |
NO3 | Nitrate | micromoles per liter |
ctd_temp2 | Temperature from Falkor CTD [ITS-90] | Celsius |
ctd_sal2 | Salinity from Falkor CTD | Practical Salinity Units |
ctd_density2 | Density from Falkor CTD | kilograms per meter cubed |
ctd_sigmatheta2 | Sigma Theta Density from Falkor CTD | kilograms per meter cubed |
ctd_chla | Chlorophyll A from Falkor CTD | milograms per meter cubed |
ctd_O2_2 | Oxygen from Falkor CTD | micromoles per kilogram |
tmrd_temp | Temperature from Trace Metal Rosette downcast [ITS-90] | Celsius |
tmrd_sal | Salinity from Trace Metal Rosette downcast | Practical Salinity Units |
tmrd_density | Density from Trace Metal Rosette downcast | kilograms per meter cubed |
tmrd_sigmatheta | Sigma Theta Density from Trace Metal Rosette downcast | kilograms per meter cubed |
tmru_temp | Temperature from Trace Metal Rosette upcast [ITS-90] | Celsius |
tmru_sal | Salinity from Trace Metal Rosette upcast | Practical Salinity Units |
tmru_density | Density from Trace Metal Rosette upcast | kilograms per meter cubed |
tmru_sigmatheta | Sigma Theta Density from Trace Metal Rosette upcast | kilograms per meter cubed |
tmru_O2 | Oxygen from Trace Metal Rosette upcast | micromoles per kilogram |
Dataset-specific Instrument Name | Alpkem Autosampler |
Generic Instrument Name | Alpkem RFA300 |
Dataset-specific Description | Used in nutrient analysis |
Generic Instrument Description | A rapid flow analyser (RFA) that may be used to measure nutrient concentrations in seawater. It is an air-segmented, continuous flow instrument comprising a sampler, a peristaltic pump which simultaneously pumps samples, reagents and air bubbles through the system, analytical cartridge, heating bath, colorimeter, data station, and printer. The RFA-300 was a precursor to the smaller Alpkem RFA/2 (also RFA II or RFA-2). |
Dataset-specific Instrument Name | SeaBird SBE19 CTD |
Generic Instrument Name | CTD Sea-Bird |
Dataset-specific Description | Used for water sampling |
Generic Instrument Description | Conductivity, Temperature, Depth (CTD) sensor package from SeaBird Electronics, no specific unit identified. This instrument designation is used when specific make and model are not known. See also other SeaBird instruments listed under CTD. More information from Sea-Bird Electronics. |
Dataset-specific Instrument Name | Technicon AutoAnalyzer II |
Generic Instrument Name | Technicon AutoAnalyzer II |
Dataset-specific Description | Used to measure phosphate and ammonium |
Generic Instrument Description | A rapid flow analyzer that may be used to measure nutrient concentrations in seawater. It is a continuous segmented flow instrument consisting of a sampler, peristaltic pump, analytical cartridge, heating bath, and colorimeter. See more information about this instrument from the manufacturer. |
Dataset-specific Instrument Name | Trace Metal Rosette |
Generic Instrument Name | Trace Metal Bottle |
Dataset-specific Description | Used for nutrient sampling |
Generic Instrument Description | Trace metal (TM) clean rosette bottle used for collecting trace metal clean seawater samples. |
Website | |
Platform | R/V Falkor |
Report | |
Start Date | 2016-01-16 |
End Date | 2016-02-11 |
Description | Project: Using Proteomics to Understand Oxygen Minimum Zones (ProteOMZ)
More information is available from the ship operator at https://schmidtocean.org/cruise/investigating-life-without-oxygen-in-the...
Additional cruise information is available from the Rolling Deck to Repository (R2R): https://www.rvdata.us/search/cruise/FK160115 |
From Schmidt Ocean Institute's ProteOMZ Project page:
Rising temperatures, ocean acidification, and overfishing have now gained widespread notoriety as human-caused phenomena that are changing our seas. In recent years, scientists have increasingly recognized that there is yet another ingredient in that deleterious mix: a process called deoxygenation that results in less oxygen available in our seas.
Large-scale ocean circulation naturally results in low-oxygen areas of the ocean called oxygen deficient zones (ODZs). The cycling of carbon and nutrients – the foundation of marine life, called biogeochemistry – is fundamentally different in ODZs than in oxygen-rich areas. Because researchers think deoxygenation will greatly expand the total area of ODZs over the next 100 years, studying how these areas function now is important in predicting and understanding the oceans of the future. This first expedition of 2016 led by Dr. Mak Saito from the Woods Hole Oceanographic Institution (WHOI) along with scientists from University of Maryland Center for Environmental Science, University of California Santa Cruz, and University of Washington aimed to do just that, investigate ODZs.
During the 28 day voyage named “ProteOMZ,” researchers aboard R/V Falkor traveled from Honolulu, Hawaii to Tahiti to describe the biogeochemical processes that occur within this particular swath of the ocean’s ODZs. By doing so, they contributed to our greater understanding of ODZs, gathered a database of baseline measurements to which future measurements can be compared, and established a new methodology that could be used in future research on these expanding ODZs.
Funding Source | Award |
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Gordon and Betty Moore Foundation: Marine Microbiology Initiative (MMI) | |
Alfred P. Sloan Foundation (Sloan) | |
Schmidt Ocean Institute (SOI) |