Net primary production and nutrient data from R/V Hugh R. Sharp cruise HRS1414 CTD casts in the Mid and South-Atlantic Bight from July to August of 2014 (DANCE project)

Website: https://www.bco-dmo.org/dataset/733711
Data Type: Cruise Results
Version: 1
Version Date: 2018-04-19

Project
» Collaborative Research: Impacts of atmospheric nitrogen deposition on the biogeochemistry of oligotrophic coastal waters (DANCE)
ContributorsAffiliationRole
Mulholland, MargaretOld Dominion University (ODU)Principal Investigator
Najjar, RaymondPennsylvania State University (PSU)Co-Principal Investigator
Sedwick, Peter N.Old Dominion University (ODU)Co-Principal Investigator
York, Amber D.Woods Hole Oceanographic Institution (WHOI BCO-DMO)BCO-DMO Data Manager

Abstract
Net primary production (NPP) and nutrient data were acquired from R/V Hugh R. Sharp cruise HRS1414 CTD casts in the Mid and South-Atlantic Bight from July to August of 2014 between latitudes 31.60°N and 38.89°N, and longitudes 71.09°W and 75.16°W.


Coverage

Spatial Extent: N:38.89 E:-71.09 S:31.6 W:-75.16
Temporal Extent: 2014-07-31 - 2014-08-14

Methods & Sampling

Codes in the data:
* ND: not determined
* BDL: below detection limit
* DNP: Data not presented

Water column sample collection and in-situ measurements:

Water-column samples for analysis of Chl a, nitrate, nitrite, phosphate, urea, ammonium and net primary productivity, and continuous profiles of temperature and salinity were collected using a conductivity-temperature-depth sensor (SBE 911 plus) with a 12 Bottle Frame & Carousel (SBE 32) consisting of 12 niskin bottles. Nutrient samples were collected from the niskin bottles using acid cleaned tubing and were filtered through a 0.2 µm filter. Whole water samples to measure net primary production were collected directly from CTD bottles using acid cleaned tubing and drained into acid cleaned 10L carboys. Measurement of net primary production was done using stable isotopes. Whole water samples were taken with a niskin bottle from the surface, mix layer, and chlorophyll maximum and transferred into acid-cleaned 250 mL, 500mL, 1000ml or 2000ml PETG incubation bottles in triplicate. Primary productivity was measured by adding tracer additions (<10% of the ambient dissolved inorganic carbon) of NaH13CO2 and incubating for 12-24 hours in flow-through seawater incubators under neutral density screening. Dark bottles were also incubated. After 12-24 hours, incubations were terminated by filtration through pre-combusted (450 degree C for 2 h) GF/F filters. Filters were stored at -20 degree C until analysis in the laboratory. Filters were analyzed on a Europa 20/20 isotope ratio mass spectrometer equipped with an automated nitrogen and carbon analysis for gas, solids, and liquids (ANCA-GSL) preparation module. Analysis also resulted in particulate nitrogen (PN) and particulate carbon (PC) values.

NO3 & NO2: Dissolved nitrate and nitrite was determined at sea using an Astoria Pacific nutrient autoanalyzer using standard colorimetric methods with a detection limit of 0.14 µM (Parsons et al., 1984; Price and Harrison, 1987). In surface waters, nitrate and nitrite were determined using the same autoanalyzer equipped with a liquid waveguide capillary cell (World Precision Instruments) (Zhang, 2000) to achieve a detection limit of 0.02 µM.

PO4: Dissolved phosphate was determined at sea using an Astoria Pacific nutrient autoanalyzer using standard colorimetric methods with a detection limit of 0.03 µM (Parsons et al., 1984; Price and Harrison, 1987).

NH4: Dissolved ammonium was determined at sea using the manual orthophthaldialdehyde method (Holmes et al., 1999).

Urea: Dissolved urea was determined at sea using an Astoria Pacific nutrient autoanalyzer using standard colorimetric methods with a detection limit of 0.08 µM (Parsons et al., 1984; Price and Harrison, 1987).

Temperature: In-situ temperature was measured using a conductivity-temperature-depth sensor (SBE 911 plus).

Salinity: Salinity was calculated from in-situ conductivity, as measured using a conductivity-temperature-depth (CTD) sensor (SBE 911 plus).

Chl: Chlorophyll a was determined at sea using the non-acidification method with a Turner 10-AU fluorometer (Welschmeyer et al., 1994).

NPP: Net primary production was measured using stable isotopes (Mulholland et al., 2006).

PNPC: Particulate nitrogen and carbon samples were collected by filtering whole water samples through pre-combusted (450 degree C for 2 h) GF/F filters. Filters were stored at -20 degree C until analysis in the laboratory. Filters were analyzed on a Europa 20/20 isotope ratio mass spectrometer equipped with an automated nitrogen and carbon analysis for gas, solids, and liquids (ANCA-GSL) preparation module.


Data Processing Description

BCO-DMO Data Manager Processing Notes:
* added a conventional header with dataset name, PI name, version date
* modified parameter names to conform with BCO-DMO naming conventions
* After discussing with data contributors:
* Formatted date as yyyy-mm-dd
* rounded lat/lon to four decimal places, depth to 0 decimal places, and temp/sal to one decimal place.


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Data Files

File
DANCE_DATASET_CTD_NUTS_NPP.csv
(Comma Separated Values (.csv), 22.01 KB)
MD5:37f07a39b1d1cc6f3168cbbd23a3a5d0
Primary data file for dataset ID 733711

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Related Publications

Holmes, R. M., Aminot, A., Kérouel, R., Hooker, B. A., & Peterson, B. J. (1999). A simple and precise method for measuring ammonium in marine and freshwater ecosystems. Canadian Journal of Fisheries and Aquatic Sciences, 56(10), 1801–1808. doi:10.1139/f99-128
Methods
Mulholland, M. R., Bernhardt, P. W., Heil, C. A., Bronk, D. A., & O’Neil, J. M. (2006). Nitrogen fixation and release of fixed nitrogen by Trichodesmium spp. in the Gulf of Mexico. Limnology and Oceanography, 51(4), 1762–1776. doi:10.4319/lo.2006.51.4.1762
Methods
Parsons, T. R., Y. Maita, and C. M. Lalli. "A Manual of Chemical and Biological Methods of Seawater Analysis", Pergamon Press (1984). ISBN: 9780080302874
Methods
Price, N. M., & Harrison, P. J. (1987). Comparison of methods for the analysis of dissolved urea in seawater. Marine Biology, 94(2), 307–317. doi:10.1007/bf00392945 https://doi.org/10.1007/BF00392945
Methods
Welschmeyer, N. A. (1994). Fluorometric analysis of chlorophyll a in the presence of chlorophyll b and pheopigments. Limnology and Oceanography, 39(8), 1985–1992. doi:10.4319/lo.1994.39.8.1985
Methods
Zhang, J.-Z. (2000). Shipboard automated determination of trace concentrations of nitrite and nitrate in oligotrophic water by gas-segmented continuous flow analysis with a liquid waveguide capillary flow cell. Deep Sea Research Part I: Oceanographic Research Papers, 47(6), 1157–1171. doi:10.1016/s0967-0637(99)00085-0 https://doi.org/10.1016/S0967-0637(99)00085-0
Methods

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Parameters

ParameterDescriptionUnits
Station

DANCE cruise station number

unitless
Cast

DANCE CTD cast number

unitless
Bottle

CTD bottle number

unitless
Date

local date (EDT) of collection in format yyyy-mm-dd

unitless
Latitude

latitude at start of CTD deployment

decimal degrees
Longitude

longitude at start of CTD deployment

decimal degrees
Depth

sample collection depth (below surface)

meters
Sal

salinity calculated from CTD conductivity

Practical Salinity Units (PSU)
Temperature

in-situ temperature from CTD

degrees Celsius
CHL_a

chlorophyll a concentration

micrograms per liter (ug/l)
NO3

dissolved nitrate concentration

micromoles per liter (umol/l)
NO2

dissolved nitrite concentration

micromoles per liter (umol/l)
PO4

dissolved phosphate concentration

micromoles per liter (umol/l)
NH4

dissolved ammonium concentration

nanomoles per liter (nmol/l)
Urea

dissolved urea concentration

micromoles per liter (umol/l)
NPP

net primary productivity

micromoles C per liter per day(umol/l/d)
PC

particulate carbon

micromoles C per liter (umol/l)
PN

particulate nitrogen

micromoles N per liter (umol/l)


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Instruments

Dataset-specific Instrument Name
Generic Instrument Name
CTD Sea-Bird SBE 911plus
Generic Instrument Description
The Sea-Bird SBE 911 plus is a type of CTD instrument package for continuous measurement of conductivity, temperature and pressure. The SBE 911 plus includes the SBE 9plus Underwater Unit and the SBE 11plus Deck Unit (for real-time readout using conductive wire) for deployment from a vessel. The combination of the SBE 9 plus and SBE 11 plus is called a SBE 911 plus. The SBE 9 plus uses Sea-Bird's standard modular temperature and conductivity sensors (SBE 3 plus and SBE 4). The SBE 9 plus CTD can be configured with up to eight auxiliary sensors to measure other parameters including dissolved oxygen, pH, turbidity, fluorescence, light (PAR), light transmission, etc.). more information from Sea-Bird Electronics

Dataset-specific Instrument Name
Shimadzu RF-1501
Generic Instrument Name
Fluorometer
Dataset-specific Description
Fluorimetric detector (NH4): Shimadzu RF-1501
Generic Instrument Description
A fluorometer or fluorimeter is a device used to measure parameters of fluorescence: its intensity and wavelength distribution of emission spectrum after excitation by a certain spectrum of light. The instrument is designed to measure the amount of stimulated electromagnetic radiation produced by pulses of electromagnetic radiation emitted into a water sample or in situ.

Dataset-specific Instrument Name
Turner Designs 10-AU fluorometer
Generic Instrument Name
Fluorometer
Generic Instrument Description
A fluorometer or fluorimeter is a device used to measure parameters of fluorescence: its intensity and wavelength distribution of emission spectrum after excitation by a certain spectrum of light. The instrument is designed to measure the amount of stimulated electromagnetic radiation produced by pulses of electromagnetic radiation emitted into a water sample or in situ.

Dataset-specific Instrument Name
Europa 20/20 isotope ratio mass spectrometer
Generic Instrument Name
Mass Spectrometer
Dataset-specific Description
NPP: Europa 20/20 isotope ratio mass spectrometer equipped with an automated nitrogen and carbon analysis for gas, solids, and liquids (ANCA-GSL) preparation module.
Generic Instrument Description
General term for instruments used to measure the mass-to-charge ratio of ions; generally used to find the composition of a sample by generating a mass spectrum representing the masses of sample components.

Dataset-specific Instrument Name
Astoria Pacific nutrient autoanalyzer
Generic Instrument Name
Nutrient Autoanalyzer
Dataset-specific Description
Macronutrient analysis (NO3, NO2, Urea, PO4)
Generic Instrument Description
Nutrient Autoanalyzer is a generic term used when specific type, make and model were not specified. In general, a Nutrient Autoanalyzer is an automated flow-thru system for doing nutrient analysis (nitrate, ammonium, orthophosphate, and silicate) on seawater samples.


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Deployments

HRS1414

Website
Platform
R/V Hugh R. Sharp
Start Date
2014-07-29
End Date
2014-08-16


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Project Information

Collaborative Research: Impacts of atmospheric nitrogen deposition on the biogeochemistry of oligotrophic coastal waters (DANCE)

Coverage: Offshore Mid-Atlantic Bight and northern South-Atlantic Bight between latitudes 31.60°N and 38.89°N, and longitudes 71.09°W and 75.16°W


NSF abstract:

Deposition of atmospheric nitrogen provides reactive nitrogen species that influence primary production in nitrogen-limited regions. Although it is generally assumed that these species in precipitation contributes substantially to anthropogenic nitrogen loadings in many coastal marine systems, its biological impact remains poorly understood. Scientists from Pennsylvania State University, William & Mary College, and Old Dominion University will carry out a process-oriented field and modeling effort to test the hypothesis that deposits of wet atmospheric nitrogen (i.e., precipitation) stimulate primary productivity and accumulation of algal biomass in coastal waters following summer storms and this effect exceeds the associated biogeochemical responses to wind-induced mixing and increased stratification caused by surface freshening in oligotrophic coastal waters of the eastern United States. To attain their goal, the researchers would perform a Lagrangian field experiment during the summer months in coastal waters located between Delaware Bay and the coastal Carolinas to determine the response of surface-layer biogeochemistry and biology to precipitation events, which will be identified and intercepted using radar and satellite data. As regards the modeling effort, a 1-D upper ocean mixing model and a 1-D biogeochemical upper-ocean will be calibrated by assimilating the field data obtained a part of the study using the adjoint method. The hypothesis will be tested using sensitivity studies with the calibrated model combined with in-situ data and results from the incubation experiments. Lastly, to provide regional and historical context for the field measurements and the associated 1-D modeling, linked regional atmospheric-oceanic biogeochemical modeling will be conducted.

Broader Impacts. Results from the study would be incorporated into class lectures for graduate courses on marine policy and marine biogeochemistry. One graduate student from Pennsylvania State University, one graduate student from the College of William and Mary, and one graduate and one undergraduate student from Old Dominion University would be supported and trained as part of this project.



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Funding

Funding SourceAward
NSF Division of Ocean Sciences (NSF OCE)
NSF Division of Ocean Sciences (NSF OCE)

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