Dataset: 16S and 18S rRNA gene amplicon sequence links and metadata from microbial mesocosms spiked with 2-heptyl-4-quinolone (HHQ) experiments, Bergen, Norway, May 2017

This dataset has not been validatedFinal no updates expectedVersion 1 (2019-01-21)Dataset Type:experimental

Principal Investigator: Kristen E. Whalen (Haverford College)

Co-Principal Investigator: Elizabeth Harvey (Skidaway Institute of Oceanography)

BCO-DMO Data Manager: Nancy Copley (Woods Hole Oceanographic Institution)

Project: Collaborative Research: Building a framework for the role of bacterial-derived chemical signals in mediating phytoplankton population dynamics (HHQSignals)

Cite Dataset

This dataset includes NCBI links and metadata for 16S and 18S rRNA gene amplicon sequences from microbial mesocosms spiked with 2-heptyl-4-quinolone (HHQ) experiments, Bergen, Norway, May 2017.

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Amaral-Zettler, L. A., McCliment, E. A., Ducklow, H. W., & Huse, S. M. (2009). A Method for Studying Protistan Diversity Using Massively Parallel Sequencing of V9 Hypervariable Regions of Small-Subunit Ribosomal RNA Genes. PLoS ONE, 4(7), e6372. doi:10.1371/journal.pone.0006372
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Amaral-Zettler, L. A., McCliment, E. A., Ducklow, H. W., & Huse, S. M. (2009). Correction: A Method for Studying Protistan Diversity Using Massively Parallel Sequencing of V9 Hypervariable Regions of Small-Subunit Ribosomal RNA Genes. PLoS ONE, 4(12). doi:10.1371/annotation/50c43133-0df5-4b8b-8975-8cc37d4f2f26
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Biller, S. J., Berube, P. M., Dooley, K., Williams, M., Satinsky, B. M., Hackl, T., … Chisholm, S. W. (2018). Marine microbial metagenomes sampled across space and time. Scientific Data, 5, 180176. doi:10.1038/sdata.2018.176
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Caporaso, J. G., Lauber, C. L., Walters, W. A., Berg-Lyons, D., Huntley, J., Fierer, N., … Knight, R. (2012). Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms. The ISME Journal, 6(8), 1621–1624. doi:10.1038/ismej.2012.8

Whalen, K. E., Harvey, E. (2019) 16S and 18S rRNA gene amplicon sequence links and metadata from microbial mesocosms spiked with 2-heptyl-4-quinolone (HHQ) experiments, Bergen, Norway, May 2017. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2019-01-21 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/753232 [access date]

Terms of Use

This dataset is licensed under Creative Commons Attribution 4.0.


If you wish to use this dataset, it is highly recommended that you contact the original principal investigators (PI). Should the relevant PI be unavailable, please contact BCO-DMO (info@bco-dmo.org) for additional guidance. For general guidance please see the BCO-DMO Terms of Use document.

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Funded by the U.S. National Science Foundation