Dataset: Vitamin and methionine quantifications from SPOT cruises during different months from from March to December 2017

ValidatedRelease Date:2019-12-31Final no updates expectedVersion 0 (2019-02-06)Dataset Type:Cruise Results

Principal Investigator: Sergio A. Sanudo-Wilhelmy (University of Southern California)

Co-Principal Investigator: David A. Hutchins (University of Southern California)

Contact: Laura Gómez-Consarnau (University of Southern California)

BCO-DMO Data Manager: Shannon Rauch (Woods Hole Oceanographic Institution)


Project: Can the availability of B-vitamins control phyto-and-bacterioplankton successions in a coastal upwelling region? (B-vitamin plankton succession)

Samples for quantification of B-vitamins B1, B7, CB12 and Methionine were collected at a six of depths within the euphotic zone (5-250m). Seawater was collected from each CTD depth using Niskin bottles and immediately filtered. Particulate samples for chlorophyll quantifications were collected using in-line 0.2um, 3µm and 10um pore-size filters and a peristaltic pump (flow rate < 50 ml per minute), transferred into sterile cryovials and were immediately stored at -80 degrees C until analysis. Pigments were extracted from the filters in 3 mL of methanol, BHT(butylated hydroxytoluene) was added and placed in a -20 degrees C freezer overnight. For chlorophyll-a measurements, 100 microliters of the pigment extraction were diluted in acetone (50x dilution) and analyzed using a Turner 10AU fluorometer.

B-vitamins and Methionine samples were analyzed as in Suffridge et al. 2017. Two liters of seawater were filtered through um pore-size filters and then preconcentrated using a C18 resin (HF Bondesil (Agilent Technologies) and analyzed by liquid chromatography/triple mass spectrometry (LC/MS/MS/MS). The LCMS system consists of a ThermoTSQ Quantum Access electro-spray ionization triple quadrupole mass spectrometer, coupled to a Thermo Accela High Speed Liquid Chromatography system. The LC system used a stable- bond C18 reversed-phase column (DiscoveryHSC18 10cm × 2.1mm,5 μm column, Supelco Analytical) with a100 uL sample loop. In order to increase the sensitivity and precision, theLC/MS was run in full-loop mode (100 ul/injection).

Bacterial cell counts were heterotrophic prokaryotes were enumerated by flow-cytometry (Becton–Dickinson FACScalibur) (Gasol & del Giorgio, 2000).


Related Datasets

No Related Datasets

Related Publications

Methods

Gasol, J. M., & Del Giorgio, P. A. (2000). Using flow cytometry for counting natural planktonic bacteria and understanding the structure of planktonic bacterial communities. Scientia Marina, 64(2), 197–224. doi:10.3989/scimar.2000.64n2197
Methods

Suffridge, C., Cutter, L., & Sañudo-Wilhelmy, S. A. (2017). A New Analytical Method for Direct Measurement of Particulate and Dissolved B-vitamins and Their Congeners in Seawater. Frontiers in Marine Science, 4. doi:10.3389/fmars.2017.00011