Dataset: 16S rRNA gene amplicon sequences from FLOCS experiments at the Juan de Fuca Ridge CORKs during August 2014.

ValidatedFinal no updates expectedVersion 1 (2019-02-20)Dataset Type:Cruise Results

Principal Investigator: Beth N. Orcutt (Bigelow Laboratory for Ocean Sciences)

Co-Principal Investigator: Gustavo Ramirez (University of Southern California)

BCO-DMO Data Manager: Mathew Biddle (Woods Hole Oceanographic Institution)

Program: Center for Dark Energy Biosphere Investigations (C-DEBI)

Project: Collaborative Research: Completing single- and cross-hole hydrgeologic and microbial experiments: Juan de Fuca Flank (JdF Flank)

Cite Dataset

The DNA data from the Juan de Fuca project are publicly available through NCBI Short Read Archive under BioProject PRJNA472057; BioSample accession numbers: SAMN09228041- SAMN09228055 

species: uncultivated marine metagenome

description of the types of sequences: Illumina amplicon sequences of the V1-V3 hypervariable region of the 16S rRNA gene

locations where species were collected: IODP holes U1301A, U1362A, and U1362B on the Juan de Fuca Ridge flank, 47.45N/127.45W

Related Datasets

No Related Datasets

Related Publications

Methods
Fisher, A. T., Wheat, C. G., Becker, K., Cowen, J., Orcutt, B., Hulme, S., … Edwards, K. J. (2011). Design, deployment, and status of borehole observatory systems used for single-hole and cross-hole experiments, IODP Expedition 327, eastern flank of Juan de Fuca Ridge. Proceedings of the IODP. doi:10.2204/iodp.proc.327.107.2011
Methods
Orcutt, B. N., Bach, W., Becker, K., Fisher, A. T., Hentscher, M., Toner, B. M., … Edwards, K. J. (2010). Colonization of subsurface microbial observatories deployed in young ocean crust. The ISME Journal, 5(4), 692–703. doi:10.1038/ismej.2010.157

Orcutt, B. N., Ramirez, G. (2019) 16S rRNA gene amplicon sequences from FLOCS experiments at the Juan de Fuca Ridge CORKs during August 2014.. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2019-02-20 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/754354 [access date]

Terms of Use

This dataset is licensed under Creative Commons Attribution 4.0.


If you wish to use this dataset, it is highly recommended that you contact the original principal investigators (PI). Should the relevant PI be unavailable, please contact BCO-DMO (info@bco-dmo.org) for additional guidance. For general guidance please see the BCO-DMO Terms of Use document.

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Funded by the U.S. National Science Foundation