Dataset: Voucher summary of invertebrates and barcoded OTU's with field identifications, collected from Palau marine lakes

This dataset has not been validatedRelease Date:2019-07-08Final no updates expectedDOI: 10.1575/1912/bco-dmo.768196.1Version 1 (2019-05-13)Dataset Type:Other Field Results

Principal Investigator: Michael N. Dawson (University of California-Merced)

BCO-DMO Data Manager: Nancy Copley (Woods Hole Oceanographic Institution)


Program: Dimensions of Biodiversity (Dimensions of Biodiversity)

Project: Do Parallel Patterns Arise from Parallel Processes? (PaPaPro)


Abstract

Voucher summary of invertebrates and barcoded OTU's with field identifications, collected from Palau marine lakes.

Voucher summary of invertebrates and barcoded OTU's with field identifications, collected from Palau marine lakes. Summaries by major taxon (e.g. phylum) are provided.

* NOTE: The P.I.'s are using this dataset to write papers. Please contact them before using these data to make sure you are not duplicating efforts.


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Methods

BROWN, S. D. J., COLLINS, R. A., BOYER, S., LEFORT, M.-C., MALUMBRES-OLARTE, J., VINK, C. J., & CRUICKSHANK, R. H. (2012). Spider: An R package for the analysis of species identity and evolution, with particular reference to DNA barcoding. Molecular Ecology Resources, 12(3), 562–565. doi:10.1111/j.1755-0998.2011.03108.x
Methods

Dawson, M. N., Raskoff, K. A., & Jacobs, D. K. (1998). Field preservation of marine invertebrate tissue for DNA analyses. Molecular marine biology and biotechnology, 7(2), 145-152.
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Edgar, R. C. (2004). MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Research, 32(5), 1792–1797. doi:10.1093/nar/gkh340
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Huang, D., Meier, R., Todd, P. A., & Chou, L. M. (2008). Slow Mitochondrial COI Sequence Evolution at the Base of the Metazoan Tree and Its Implications for DNA Barcoding. Journal of Molecular Evolution, 66(2), 167–174. doi:10.1007/s00239-008-9069-5
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IVANOVA, N. V., DEWAARD, J. R., & HEBERT, P. D. N. (2006). An inexpensive, automation-friendly protocol for recovering high-quality DNA. Molecular Ecology Notes, 6(4), 998–1002. doi:10.1111/j.1471-8286.2006.01428.x