Dataset: Picocyanobacteria TEP: Suspended Aggregates

Name: Suspended aggregates of xenic and axenic marine Prochlorococcus and Synechococcus cultures from laboratory experiments conducted in 2016 and 2017
Published: 2019-08-13
Keywords: oceans

Cite This Dataset

DOI:10.1575/1912/bco-dmo.774639.1

Temporal Extent: 2016 - 2017

Project:

Aggregation of Marine Picoplankton (Marine Plankton Aggregation)

Principal Investigator:

Susanne Neuer (Arizona State University, ASU)

Student:

Bianca N. Cruz (Arizona State University, ASU)

Contact:

Susanne Neuer (Arizona State University, ASU)

BCO-DMO Data Manager:

Amber D. York (Woods Hole Oceanographic Institution, WHOI BCO-DMO)

Version:

Version Date:

2019-08-13

Restricted:

Validated:

Yes

Current State:

Final no updates expected

Suspended aggregates of xenic and axenic marine Prochlorococcus and Synechococcus cultures from laboratory experiments conducted in 2016 and 2017

Abstract:

Suspended aggregates of xenic and axenic marine Prochlorococcus and Synechococcus cultures from laboratory experiments conducted in 2016 and 2017.

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Archival Copy

Version Date	Archive	Persistent Identifier (PID)	Date PID Issued
2019-08-13	Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)	10.1575/1912/bco-dmo.774639.1	2019-12-24

Description

Suspended aggregates of xenic and axenic marine Prochlorococcus and Synechococcus cultures from laboratory experiments conducted in 2016 and 2017.

These data were published in Cruz and Neuer, 2019.

Related datasets from the same laboratory experiments:
Picocyanobacteria TEP: Cell Abundance https://www.bco-dmo.org/dataset/774628
Picocyanobacteria TEP: Growth Rates https://www.bco-dmo.org/dataset/774634
Picocyanobacteria TEP: TEP Concentration https://www.bco-dmo.org/dataset/774646

Methods & Sampling

Methodology:
Duplicate cultures of Synechococcus WH8102 (axenic), Synechococcus WH7805 (xenic) and Prochlorococcus marinus MED4 (xenic and axenic) were sampled every other day for 17-19 days for the quantification of single cells, suspended aggregates (aggregates ca. 5-60 μm), and TEP. Suspended aggregates were quantified using a Multisizer 3 Particle Counter.

Data Processing Description

BCO-DMO Data Manager Processing Notes: Growth Rates
* Excel sheet extracted to a csv file
* added a conventional header with dataset name, PI name, version date
* modified parameter names to conform with BCO-DMO naming conventions
* blank values in this dataset are displayed as "nd" for "no data." nd is the default missing data identifier in the BCO-DMO system.

Data Files

File
agg.csv (Comma Separated Values (.csv), 1.44 KB) MD5:1c4c929d89dec92a4e6cb5601ad70a63 Primary data file for dataset ID 774639

More Information about this dataset

Funding Sources

Funding Source	Award Number
NSF Division of Ocean Sciences	OCE-1658527

Deployments

None available yet

Instruments

Particle Size Analyzer

Supplied Name: Multisizer 3 Particle Counter, Beckman Coulter, CA

Supplied Description:

Instrument Type

Generic Name: Particle Size Analyzer

Generic Description:

Particle size analysis, particle size measurement, or simply particle sizing is the collective name of the technical procedures, or laboratory techniques which determines the size range, and/or the average, or mean size of the particles in a powder or liquid sample.

Parameters

Date and time formats are described in python strftime() syntax.

Supplied Name	Supplied description	Supplied Units	Standard Name
Culture	Culture name	unitless	sample_descrip
Days	Days since experiment start	count (days)	time_elapsed
Suspended_Aggregate_Volume_Concentration_rep1	Volume concentration of suspended aggregates for replicate 1 with an equivalent spherical diameter of 5-60 μm.	x10^6 μm^3 per mL	sample_descrip
Suspended_Aggregate_Volume_Concentration_rep2	Volume concentration of suspended aggregates for replicate 2 with an equivalent spherical diameter of 5-60 μm.	x10^6 μm^3 per mL	sample_descrip