Table of Contents

• Coverage
• Dataset Description
  • Methods & Sampling
  • Data Processing Description
• Data Files
• Related Publications
• Parameters
• Instruments
• Deployments
• Project Information
• Funding

Porewater nutrient, sulfide, and sulfate (NH4+, NO2-, NO3-, PO43-, SiO42-, Cl-, S2-, SO24-) concentrations in Alvin pushcore samples from Guaymas Basin hydrothermal vents, R/V Atlantis cruise AT42-05, Nov. 2018. These samples were analyzed at the Max Planck Institute for Marine Microbiology in Bremen, Germany.

Porewater samples from this cruise were also reported by Woods Hole Oceanographic Institution (NO3+NO2, NH4, PO4) and the University of North Carolina at Chapel Hill (sulfate and sulfide). See related datasets:
https://www.bco-dmo.org/dataset/773129 (WHOI)
https://www.bco-dmo.org/dataset/816852 (UNC)

This porewater dataset was obtained at the Max-Planck-Institute for Marine Microbiology in Bremen, Germany. The sampling site names in the data are based on Teske et al. 2016.

For analyses at the Max-Planck Institute for Marine Microbiology (Gunter Wegener), intact sediment cores were sampled using the Rhizons (Rhizosphere Research Products, Wageningen, NL) as described previously (Seeberg-Elversfeldt et al., 2005). The overlying water was removed from the cores and holes were drilled into designated sediment sampling depths. Pretreated Rhizons were injected and suction was applied with syringes for approx. 30 min. The rhizome depths are given in the dataset (depth_bsf).

For sulfide analysis, 1 ml porewater subsamples were fixed with 0.1 ml of 0.1 M zinc acetate solution to preserve the sulfide as zinc sulfide until analysis by the methylene blue method (Cline 1969). The same fixed porewater sample was used for measuring sulfate concentrations using ion chromatography (Metrohm 930 Compact IC flex oven, Metrosep A PCC HC/4.0 preconcentration column, and Metrosep A Supp 5 Guard/4.0 chromatography column).

The concentrations of ammonia, nitrite, nitrate, phosphate, and silicate were determined from porewater using a continuous flow nutrient analyzer (QuAAtro39; Seal Analytical) as published previously (Grasshoff et al., 2009).

Problem report: Transport problems have caused sample losses among the porewater samples, which are evident in occasional gaps in porewater profiles.

BCO-DMO Processing:
 - renamed fields;
 - removed empty columns;
 - changed date format from DD.MM.YYYY to YYYY-MM-DD;
 - added Site, Sample_type, Lat, Lon, and Water_depth fields from information originally provided in Word;
 - removed commas in Site and Sample_type columns;
- joined data columns from separate spreadsheets into one data by matching on key Dive+Core+depth_bsf.

NSF Award Abstract:
Fungi that can derive energy from chemicals, yet consume other organisms or organic material to obtain carbon have been reported from diverse marine subsurface samples, including from hundreds of meters below the seafloor. Evidence exists that Fungi are active in subsurface marine sediments globally, yet there is a dearth of knowledge on their role in the marine subsurface, and specifically on their role(s) in hydrocarbon degradation within deep-sea sediments. This team is isolating a broad collection of environmentally relevant filamentous Fungi and yeasts from hydrothermally-influenced and hydrocarbon-rich seep sediments of Guaymas Basin using high-throughput culture-based approaches. They aim to reveal the diversity of Fungi and Bacteria in these hydrothermal sediments, how temperature and hydrocarbon composition shape their distribution, and how Fungi cooperate to enhance the degradation of hydrocarbons by Bacteria. By hosting six undergraduates through the WHOI Summer Student Fellows program and the Woods Hole Partnership Education Program, the project contributes to increasing diversity in marine science by offering opportunities for promising undergraduates from disadvantaged populations. High school students are involved in summer projects and in intensive summer workshops. One postdoc, a graduate student, and two Research Associates are supported, and international collaborations are strengthened. The postdoc and graduate student are gaining valuable cruise-based experience. An e-lecture on Fungi and their role(s) in biodegradation of hydrocarbons will be made publicly available by the end of the project. Fungal isolates with accompanying information will be secured in a reference culture collection for long-term storage and are available to any interested researcher throughout the project.

The PIs are isolating a broad collection of environmentally relevant filamentous Fungi and yeasts from hydrothermally-influenced and hydrocarbon-rich seep sediments of Guaymas Basin using high-throughput culture-based approaches, with the aim to reveal their ability to degrade individual hydrocarbons under in situ pressures and temperatures. Culture independent methods marker gene analyses are used to characterize in situ fungal and bacterial diversity and to examine how temperature and hydrocarbon composition shape fungal community composition and distribution. Traditional and comprehensive two-dimensional gas chromatographic analyses are used to examine the complexities and subtle changes in inventories of hydrocarbons within sediment cores, and provide evidence for in situ microbial alteration of individual hydrocarbons. Incubation experiments are used to test the ability of fungal isolates to utilize different hydrocarbons as a sole or auxiliary carbon source under in situ pressures and temperatures and their ability to stimulate biodegradation of hydrocarbons by hydrocarbon-degrading bacteria. Expressed genes within these incubation studies tell us how Fungi and Bacteria couple metabolisms to increase overall specificity and extent of biodegradation of hydrocarbons.

This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.