Dataset: Reef fish NCBI genetic sequence accession numbers for sequences from reef fish specimens collected in the Indo-Pacific and Pacific Ocean

This dataset has not been validatedData not availableVersion 1 (2020-09-07)Dataset Type:Other Field Results

Principal Investigator: Brian Bowen (University of Hawaiʻi at Mānoa)

Contact: Mykle Hoban (University of Hawaiʻi at Mānoa)

BCO-DMO Data Manager: Amber D. York (Woods Hole Oceanographic Institution)

Program: Indo-Pac Research Coordination Network (Indo-Pac RCN)

Project: Origins of Hawaiian Reef Fishes (Hawaiian Fish Origins)

Abstract

This dataset contains NCBI GenBank accession numbers for sequences from reef fish specimens collected in the Indo-Pacific, Pacific Ocean. These results were published in Hoban & Williams, 2020.

Cite Dataset

Hoban & Williams (2020) is a phylogeographic survey and taxonomic species description. Specimens were collected throughout the Central Pacific using rotenone and hand nets and/or pole spears. Fin clips were taken for genetic analysis and whole specimens were retained for taxonomic analysis. Specimens were sequenced at the mitochondrial COI marker for phylogeographic and phylogenetic analyses.

Instruments: Specimens were collected on SCUBA using pole spears and/or hand nets and rotenone. DNA barcodes were produced with an ABI 3130XL genetic analyzer (Applied Biosystems, Foster City, California).

Related Datasets

IsSupplementTo
Dataset: https://www.ncbi.nlm.nih.gov/popset/?term=MN649936
Hoban,M.L. and Williams, J.T. (2019). Cirripectes cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial. PopSet: 1791081300. GenBank Accessions: MN649903-MN649936,MN649877-MN649902,MN649937-MN650012. The National Center for Biotechnology Information PopSet: 1791081300. Available from https://www.ncbi.nlm.nih.gov/popset/?term=MN649936

Related Publications

Results
Hoban, M. L., & Williams, J. T. (2020). Cirripectes matatakaro, a new species of combtooth blenny from the Central Pacific, illuminates the origins of the Hawaiian fish fauna. PeerJ, 8, e8852. doi:10.7717/peerj.8852

Bowen, B., Hoban, M. (2020) Reef fish NCBI genetic sequence accession numbers for sequences from reef fish specimens collected in the Indo-Pacific and Pacific Ocean. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2020-09-07 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/823315 [access date]

Terms of Use

This dataset is licensed under Creative Commons Attribution 4.0.


If you wish to use this dataset, it is highly recommended that you contact the original principal investigators (PI). Should the relevant PI be unavailable, please contact BCO-DMO (info@bco-dmo.org) for additional guidance. For general guidance please see the BCO-DMO Terms of Use document.

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Funded by the U.S. National Science Foundation