Photosynthetically active radiation (PAR) from PME miniPAR loggers deployed at the seafloor near instrument moorings inside and outside of kelp forests near the Monterey Peninsula, California, USA from June to August 2018 and 2019

Website: https://www.bco-dmo.org/dataset/865018
Data Type: Other Field Results
Version: 1
Version Date: 2021-11-16

Project
» Collaborative Research: RUI: Building a mechanistic understanding of water column chemistry alteration by kelp forests: emerging contributions of foundation species (Kelp forest biogeochemistry)
ContributorsAffiliationRole
Nickols, Kerry J.California State University Northridge (CSUN)Principal Investigator
Dunbar, Robert B.Stanford UniversityCo-Principal Investigator
Rauch, ShannonWoods Hole Oceanographic Institution (WHOI BCO-DMO)BCO-DMO Data Manager

Abstract
This data includes photosynthetically active radiation (PAR) at the seafloor near instrument moorings inside and outside of kelp forests from June to August in 2018 and 2019.


Coverage

Spatial Extent: N:36.63088 E:-121.897 S:36.61795 W:-121.9188
Temporal Extent: 2018-06-14 - 2019-10-08

Methods & Sampling

Sampling Locations:
Sampling was conducted near the Monterey Peninsula near Pacific Grove and Monterey, California, USA. Kelp sites ranged from 8.8 to 10.3 meters deep and offshore sites ranged from 13.1 to 16.5 m deep.

Instrument moorings were deployed in 2018 in the following areas: a wave-protected kelp forest, ~100 meters offshore of the protected site, in a wave-exposed site devoid of kelp (historically has had kelp), and ~100 meters offshore of the exposed site.

Instrument moorings were deployed in 2019 in the following areas: a wave-protected kelp forest, ~175 meters offshore of the protected site, in a wave-exposed kelp site, and ~180 meters offshore of the exposed site.

Location Abbreviations:
PK = Protected kelp 2018,
PO = Protected offshore 2018,
EK = Exposed ‘kelp’ 2018,
EO = Exposed offshore 2018,
MK = Protected kelp 2019,
MO = Protected offshore 2019,
OK = exposed kelp 2019,
OO = Exposed offshore 2019.

Methodology:
In 2018 and 2019, PME miniPAR loggers were deployed to the seafloor adjacent to instrument moorings. The PAR sensors were attached to cinderblocks and held in place with rebar. A mechanical wiper brush was programmed to clean the sensor every 6 hours and was active for the duration of the deployment.


Data Processing Description

Data Processing:
Data were processed using R software version 1.4.1717. Data were trimmed to exclude time outside instrument deployment. Negative values were changed to zeros (confirmed method for dealing with negative values).

BCO-DMO Processing:
- converted local date to ISO8601 format;
- created the ISO8601 date-time field in UTC.


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Data Files

File
miniPAR.csv
(Comma Separated Values (.csv), 101.79 MB)
MD5:04d3ad788549c15bc097abf58f8a30ba
Primary data file for dataset ID 865018

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Parameters

ParameterDescriptionUnits
Site

Site code:
PK = Protected kelp 2018,
PO = Protected offshore 2018,
EK = Exposed kelp 2018,
EO = Exposed offshore 2018,
MK = Protected kelp 2019,
MO = Protected offshore 2019,
OK = exposed kelp 2019,
OO = Exposed offshore 2019.

unitless
ISO_DateTime_Local

Date and time (PST) in ISO8601 format: YYYY-MM-DDThh:mm:ss

unitless
Time_zone

Indicates the local time zone (PST)

unitless
ISO_DateTime_UTC

Date and time (UTC) in ISO8601 format: YYYY-MM-DDThh:mm:ssZ

unitless
Site_depth_0_tide

Depth of the site at at 0 tide

meters (m)
Latitude

Latitude

decimal degrees North
Longitude

Longitude

decimal degrees West
Location

Indicates if the location is Kelp or Offshore

unitless
Temperature_C

Temperature

degrees Celsius
PAR_umol_s_m2

Photosynthetically active radiation

micromoles per second per square meter (umol s-1 m-2)
Acceleration_X

G-force

g
Acceleration_Y

G-force

g
Acceleration_Z

G-force

g


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Instruments

Dataset-specific Instrument Name
PME miniPAR logger
Generic Instrument Name
PME miniPAR logger
Generic Instrument Description
A submersible instrument that logs PAR (Photosynthetically Active Radiation), temperature and tilt measurements. Data are recorded on an internal SD card. The sensor is a LI-192 Underwater Quantum Sensor, manufactured by LI-COR. The sensor uses a silicon photodiode and glass optical filters to create a uniform sensitivity to light wavelengths in the 400-700nm range. It measures PAR from all angles in one hemisphere. An anti-fouling wiper is available. The instrument can be configured to record at intervals between 1 and 60 minutes. It is submersible up to 100 metres. PAR measurement accuracy is dependent upon the stability of the sensor pointed towards the water surface.


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Project Information

Collaborative Research: RUI: Building a mechanistic understanding of water column chemistry alteration by kelp forests: emerging contributions of foundation species (Kelp forest biogeochemistry)

Coverage: Central California 36.6 N 122 W


NSF Award Abstract:
Kelp forest ecosystems are of ecological and economic importance globally and provide habitat for a diversity of fish, invertebrates, and other algal species. In addition, they may also modify the chemistry of surrounding waters. Uptake of carbon dioxide (CO2) by giant kelp, Macrocystis pyrifera, may play a role in ameliorating the effects of increasing ocean acidity on nearshore marine communities driven by rising atmospheric CO2. Predicting the capacity for kelp forests to alter seawater chemistry requires understanding of the oceanographic and biological mechanisms that drive variability in seawater chemistry. The project will identify specific conditions that could lead to decreases in seawater CO2 by studying 4 sites within the southern Monterey Bay in Central California. An interdisciplinary team will examine variations in ocean chemistry in the context of the oceanographic and ecological characteristics of kelp forest habitats. This project will support an early career researcher, as well as train and support a postdoctoral researcher, PhD student, thesis master's student, and up to six undergraduate students. The PIs will actively recruit students from underrepresented groups to participate in this project through Stanford University's Summer Research in Geosciences and Engineering (SURGE) program and the Society for Advancement of Hispanics/Chicanos and Native Americans in Science (SACNAS). In addition, the PIs and students will actively engage with the management community (Monterey Bay National Marine Sanctuary and California Department of Fish and Wildlife) to advance products based on project data that will assist the development of management strategies for kelp forest habitats in a changing ocean.

This project builds upon an extensive preliminary data set and will link kelp forest community attributes and hydrodynamic properties to kelp forest biogeochemistry (including the carbon system and dissolved oxygen) to understand mechanistically how giant kelp modifies surrounding waters and affects water chemistry using unique high-resolution measurement capabilities that have provided important insights in coral reef biogeochemistry. The project sites are characterized by different oceanographic settings and kelp forest characteristics that will allow examination of relationships between kelp forest inhabitants and water column chemistry. Continuous measurements of water column velocity, temperature, dissolved oxygen, pH, and photosynthetically active radiation will be augmented by twice-weekly measurements of dissolved inorganic carbon, total alkalinity, and nutrients as well as periods of high frequency sampling of all carbonate system parameters. Quantifying vertical gradients in carbonate system chemistry within kelp forests will lead to understanding of its dependence on seawater residence time and water column stratification. Additional biological sampling of kelp, benthic communities, and phytoplankton will be used to 1) determine contributions of understory algae and calcifying species to bottom water chemistry, 2) determine contributions of kelp canopy growth and phytoplankton to surface water chemistry, and 3) quantify the spatial extent of surface chemistry alteration by kelp forests. The physical, biological, and chemical data collected across multiple forests will allow development of a statistical model for predictions of kelp forest carbonate system chemistry alteration in different locations and under future climate scenarios. Threshold values of oceanographic conditions and kelp forest characteristics that lead to alteration of water column chemistry will be identified for use by managers in mitigation strategies such as targeted protection or restoration.



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Funding

Funding SourceAward
NSF Division of Ocean Sciences (NSF OCE)
NSF Division of Ocean Sciences (NSF OCE)

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