Dataset: Primary producer amino acid nitrogen isotope values from published literature to examine beta variability in trophic position estimates

ValidatedFinal no updates expectedDOI: 10.26008/1912/bco-dmo.870320.1Version 1 (2022-03-08)Dataset Type:document

Principal Investigator: Kelton W. McMahon (University of Rhode Island)

Co-Principal Investigator: Alexi Besser (University of New Mexico)

Co-Principal Investigator: Seth D. Newsome (University of New Mexico)

Co-Principal Investigator: Matthew D. Ramirez (University of Rhode Island)

BCO-DMO Data Manager: Dana Stuart Gerlach (Woods Hole Oceanographic Institution)


Project: Collaborative Research: Sources and transformations of export production: A novel 50-year record of pelagic-benthic coupling from coral and plankton bioarchives (GoME Copepod Coral Export)


Abstract

This dataset is a meta-analysis of primary producer amino acid δ15N data presented in Ramirez et al. (2021). A literature review provided primary producer amino acid isotope data with ecologically relevant information to examine beta variability in trophic position estimates.

This dataset represents information from a meta-analysis of primary producer amino acid δ15N data that were published in Ramirez et al. (2021) [https://doi.org/10.1111/2041-210X.13678].  

This meta-analysis fulfills a pressing need to comprehensively evaluate relevant sources of β value variability and its contribution to the uncertainty in trophic position compound specific isotope analysis (TPCSIA). We first synthesized all published primary producer AA δ15N data to investigate ecologically relevant sources of variability (e.g. taxonomy, tissue type, habitat type, mode of photosynthesis). We then reviewed the biogeochemical mechanisms underpinning AA δ15N and β value variability. 

Amino acids: alanine ,arginine, aspartic acid, glutamic acid, glycine, histidine, isoleucine, leucine, lysine, methionine, phenylalanine, proline, serine, threonine, tyrosine, and valine

Environmental system: bacteria, freshwater, marine, or terrestrial

Vascularization: vascular, or non-vascular

Phylum/Division: Brypohyta, Chlorophyta, Cyanophyta, Euryarchaeota, Haptophyta, Magnoliophyta, Myzozoa, Ochrophyta, Pinophyta, Polypodiophyta, Proteobacteria, Rhodophyta, or Unknown

Stem Class: herbaceous, woody, or semi-woody

Life Cycle: annual, biennial, or perennial

Taxonomic Group: Cactus, Chemoautotroph, Cyanobacteria, Eukaryotic microalgae, Fern, Forb, Grass, Ice algae, Leaf litter, Macroalgae, Macrophyte, Moss, POM, Seagrass, Shrub, Tree, or Vine

Respiration type: C3, C4, or CAM (Crassulacean acid metabolism)

Tissue type: flower, fruit, leaf, paddle, rachis, seed, shoot, whole, or wood

Cultivation type: culture, farm, filtered water, natural, sediment trap, or suburb


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Related Publications

Methods, Results

Ramirez, M. D., Besser, A. C., Newsome, S. D., & McMahon, K. W. (2021). Meta‐analysis of primary producer amino acid δ 15 N values and their influence on trophic position estimation. In Methods in Ecology and Evolution (Vol. 12, Issue 10, pp. 1750–1767). Wiley. https://doi.org/10.1111/2041-210x.13678
Methods

McMahon, K. W., & McCarthy, M. D. (2016). Embracing variability in amino acid δ15N fractionation: mechanisms, implications, and applications for trophic ecology. Ecosphere, 7(12). Portico. https://doi.org/10.1002/ecs2.1511
Related Research

Besser, A. C., Elliott Smith, E. A., & Newsome, S. D. (2022). Assessing the potential of amino acid δ13C and δ15N analysis in terrestrial and freshwater ecosystems. Journal of Ecology. Portico. https://doi.org/10.1111/1365-2745.13853
Related Research

Bol, R., Ostle, N. J., & Petzke, K. J. (2002). Compound specific plant amino acid δ15N values differ with functional plant strategies in temperate grassland. Journal of Plant Nutrition and Soil Science, 165(6), 661–667. Portico. https://doi.org/10.1002/jpln.200290000
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Bontempo, L., van Leeuwen, K. A., Paolini, M., Holst Laursen, K., Micheloni, C., Prenzler, P. D., Ryan, D., & Camin, F. (2020). Bulk and compound-specific stable isotope ratio analysis for authenticity testing of organically grown tomatoes. Food Chemistry, 318, 126426. https://doi.org/10.1016/j.foodchem.2020.126426