Contributors | Affiliation | Role |
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Saito, Mak A. | Woods Hole Oceanographic Institution (WHOI) | Principal Investigator |
DiTullio, Giacomo | College of Charleston - Hollings Marine Lab (CoC-HML) | Co-Principal Investigator |
Chmiel, Rebecca J. | Woods Hole Oceanographic Institution (WHOI) | Contact |
Gerlach, Dana Stuart | Woods Hole Oceanographic Institution (WHOI BCO-DMO) | BCO-DMO Data Manager |
Sensors were deployed on a titanium trace metal rosette (TMR) in tandem with trace metal clean bottle samples during the RVIB Nathaniel B. Palmer cruise (NBP18-01) from December 2017 to February 2018 in coastal Antarctica. TMR casts were performed at 26 stations in the Amundsen Sea, Ross Sea and Terra Nova Bay. Parameters collected include pressure, temperature, conductivity, oxygen, fluorescence, beam transmission, PAR, and salinity.
The profiles in the dataset are from the up-cast of the TMR cast. More information on sensor data acquisition and processing can be found in "Data Report NBP18-01" from the United States Antarctic Program prepared by Matt Pullen and Bryan Chambers (see Supplemental Docs section). Trace metal rosette sensors are detailed on p.29.
For all duplicate sensors, the primary sensor was used for temperature and conductivity, and the secondary sensor was used for oxygen in the final hydrography dataset.
Problem report:
The PAR sensor was only included on the TMR beginning at station 35.
The profiles in the dataset are from the up-cast of the TMR cast. More information on sensor data acquisition and processing can be found in "Data Report NBP18-01" (see Supplemental Docs section)
- converted latitude and longitude to decimal degrees (from degrees, decimal mins)
- converted Date to YMD format
- added conventional header with dataset name, PI name, version date
- modified parameter names to conform with BCO-DMO naming conventions
File |
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Hydrography sensor data from trace metal rosette casts filename: nbp1801_tmr_hydrography.csv (Comma Separated Values (.csv), 1.85 MB) MD5:21754d2faa8fa66ef69d3e118e7ae0f7 Primary data file for dataset ID 874909, version 1 |
File |
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NBP1801 Science Data Report filename: NBP1801_Data_Report.pdf (Portable Document Format (.pdf), 4.98 MB) MD5:b556331a57dcbd36698f0f01aedab884 Science data report from Nathaniel B. Palmer cruise NBP1801 |
Parameter | Description | Units |
Latitude | Latitude of sampling location (South is negative) | decimal degrees |
Longitude | Longitude of sampling location (West is negative) | decimal degrees |
TMR_Start_DateTime_UTC | Trace metal rosette Start datetime | unitless |
Station | Station number | unitless |
Pressure | Pressure of seawater from CTD pressure sensor | decibar |
Depth | Depth of rosette from CTD altimeter | meter |
Temperature | Temperature of seawater from CTD temperature sensor | degrees Celsius |
Conductivity | Conductivity of seawater from CTD conductivity sensor | milliSiemens per centimeter (mS/cm) |
Oxygen | Concentration of dissolved oxygen from CTD oxygen sensor | milliliter per liter (mL/L) |
Fluorescence | Fluorescence of seawater from CTD fluorometer | milligrams per cubic meter (mg/m^3) |
Beam | Beam Transmission from CTD Transmissometer | percent (%) |
PAR_Irradiance | Photosynthetically Active Radiation (PAR) from CTD PAR sensor | watts per square meter (W/m^2) |
Salinity | Salinity derived from conductivity measurements | practical salinity unit (PSU) |
Dataset-specific Instrument Name | Valeport VA-500 |
Generic Instrument Name | Altimeter |
Generic Instrument Description | An instrument that measures height above a fixed surface. The data can be used to map ocean-surface topography and generate gridded surface height fields. |
Dataset-specific Instrument Name | Biospherical Instruments QSP-2350 |
Generic Instrument Name | Biospherical PAR sensor |
Generic Instrument Description | An irradiance sensor designed to measure Photosynthetically Active Radiation (PAR), manufactured by Biospherical Instruments Inc. |
Dataset-specific Instrument Name | |
Generic Instrument Name | CTD Sea-Bird SBE 911plus |
Generic Instrument Description | The Sea-Bird SBE 911 plus is a type of CTD instrument package for continuous measurement of conductivity, temperature and pressure. The SBE 911 plus includes the SBE 9plus Underwater Unit and the SBE 11plus Deck Unit (for real-time readout using conductive wire) for deployment from a vessel. The combination of the SBE 9 plus and SBE 11 plus is called a SBE 911 plus. The SBE 9 plus uses Sea-Bird's standard modular temperature and conductivity sensors (SBE 3 plus and SBE 4). The SBE 9 plus CTD can be configured with up to eight auxiliary sensors to measure other parameters including dissolved oxygen, pH, turbidity, fluorescence, light (PAR), light transmission, etc.). more information from Sea-Bird Electronics |
Dataset-specific Instrument Name | Paroscientific 410K-134 CTD pressure sensor |
Generic Instrument Name | Paroscientific 410K Pressure Transducer |
Generic Instrument Description | The Paroscientific 410K Pressure Transducer is an absolute pressure transducer with a Digiquartz pressure sensor and precision thermometer. Operates over a temperature range of 0-125 degC and a pressure range of 0-10000 psia with a typical accuracy of 0.01% and a resolution of 0.0001%. |
Dataset-specific Instrument Name | PRR |
Generic Instrument Name | Radiometer |
Dataset-specific Description | PRR (Underwater): Biospherical Instruments PRR-800
PRR (Mast): Biospherical Instruments PRR-810 |
Generic Instrument Description | Radiometer is a generic term for a range of instruments used to measure electromagnetic radiation (radiance and irradiance) in the atmosphere or the water column. For example, this instrument category includes free-fall spectral radiometer (SPMR/SMSR System, Satlantic, Inc), profiling or deck cosine PAR units (PUV-500 and 510, Biospherical Instruments, Inc). This is a generic term used when specific type, make and model were not specified. |
Dataset-specific Instrument Name | Sea-Bird 3plus 10500m |
Generic Instrument Name | Sea-Bird SBE 3plus Temperature Sensor |
Dataset-specific Description | Trace metal rosette had hydrographic sensors including Sea-Bird 3plus 10500m temperature sensor
|
Generic Instrument Description | The Sea-Bird SBE 3plus water temperature sensor is designed for use on the SBE 9plus CTD system. The sensor operates over the range -5 to +35 °C, a resolution of 0.0003 °C at 24 Hz and an initial accuracy of ± 0.001 °C. The typical sampling rate is 24 Hz, and the sensor has a depth rating of 6800 meters (aluminium housing) or 10500 meters (titanium housing). |
Dataset-specific Instrument Name | Sea-Bird SBE 43 7000m |
Generic Instrument Name | Sea-Bird SBE 43 Dissolved Oxygen Sensor |
Generic Instrument Description | The Sea-Bird SBE 43 dissolved oxygen sensor is a redesign of the Clark polarographic membrane type of dissolved oxygen sensors. more information from Sea-Bird Electronics |
Dataset-specific Instrument Name | Sea-Bird 4C 10500m conductivity sensor |
Generic Instrument Name | Sea-Bird SBE-4 Conductivity Sensor |
Dataset-specific Description | Trace metal rosette had hydrographic sensors including Sea-Bird 4C 10500m conductivity sensor
|
Generic Instrument Description | The Sea-Bird SBE-4 conductivity sensor is a modular, self-contained instrument that measures conductivity from 0 to 7 Siemens/meter. The sensors (Version 2; S/N 2000 and higher) have electrically isolated power circuits and optically coupled outputs to eliminate any possibility of noise and corrosion caused by ground loops. The sensing element is a cylindrical, flow-through, borosilicate glass cell with three internal platinum electrodes. Because the outer electrodes are connected together, electric fields are confined inside the cell, making the measured resistance (and instrument calibration) independent of calibration bath size or proximity to protective cages or other objects. |
Dataset-specific Instrument Name | TMR |
Generic Instrument Name | Trace Metal Bottle |
Generic Instrument Description | Trace metal (TM) clean rosette bottle used for collecting trace metal clean seawater samples. |
Dataset-specific Instrument Name | WetLabs ECO-FL fluorometer |
Generic Instrument Name | Wet Labs ECO-AFL/FL Fluorometer |
Generic Instrument Description | The Environmental Characterization Optics (ECO) series of single channel fluorometers delivers both high resolution and wide ranges across the entire line of parameters using 14 bit digital processing. The ECO series excels in biological monitoring and dye trace studies. The potted optics block results in long term stability of the instrument and the optional anti-biofouling technology delivers truly long term field measurements.
more information from Wet Labs |
Dataset-specific Instrument Name | WetLabs C-Star |
Generic Instrument Name | WET Labs {Sea-Bird WETLabs} C-Star transmissometer |
Generic Instrument Description | The C-Star transmissometer has a novel monolithic housing with a highly intgrated opto-electronic design to provide a low cost, compact solution for underwater measurements of beam transmittance. The C-Star is capable of free space measurements or flow-through sampling when used with a pump and optical flow tubes. The sensor can be used in profiling, moored, or underway applications. Available with a 6000 m depth rating.
More information on Sea-Bird website: https://www.seabird.com/c-star-transmissometer/product?id=60762467717 |
Website | |
Platform | RVIB Nathaniel B. Palmer |
Report | |
Start Date | 2017-12-16 |
End Date | 2018-03-03 |
Description | Start Port: Punta Arenas, Chile
End Port: Hobart, Australia |
NSF abstract:
Phytoplankton blooms in the coastal waters of the Ross Sea, Antarctica are typically dominated by either diatoms or Phaeocystis Antarctica (a flagellated algae that often can form large colonies in a gelatinous matrix). The project seeks to determine if an association of bacterial populations with Phaeocystis antarctica colonies can directly supply Phaeocystis with Vitamin B12, which can be an important co-limiting micronutrient in the Ross Sea. The supply of an essential vitamin coupled with the ability to grow at lower iron concentrations may put Phaeocystis at a competitive advantage over diatoms. Because Phaeocystis cells can fix more carbon than diatoms and Phaeocystis are not grazed as efficiently as diatoms, the project will help in refining understanding of carbon dynamics in the region as well as the basis of the food web webs. Such understanding also has the potential to help refine predictive ecological models for the region. The project will conduct public outreach activities and will contribute to undergraduate and graduate research. Engagement of underrepresented students will occur during summer student internships. A collaboration with Italian Antarctic researchers, who have been studying the Terra Nova Bay ecosystem since the 1980s, aims to enhance the project and promote international scientific collaborations.
The study will test whether a mutualistic symbioses between attached bacteria and Phaeocystis provides colonial cells a mechanism for alleviating chronic Vitamin B12 co-limitation effects thereby conferring them with a competitive advantage over diatom communities. The use of drifters in a time series study will provide the opportunity to track in both space and time a developing algal bloom in Terra Nova Bay and to determine community structure and the physiological nutrient status of microbial populations. A combination of flow cytometry, proteomics, metatranscriptomics, radioisotopic and stable isotopic labeling experiments will determine carbon and nutrient uptake rates and the role of bacteria in mitigating potential vitamin B12 and iron limitation. Membrane inlet and proton transfer reaction mass spectrometry will also be used to estimate net community production and release of volatile organic carbon compounds that are climatically active. Understanding how environmental parameters can influence microbial community dynamics in Antarctic coastal waters will advance an understanding of how changes in ocean stratification and chemistry could impact the biogeochemistry and food web dynamics of Southern Ocean ecosystems.
Funding Source | Award |
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NSF Office of Polar Programs (formerly NSF PLR) (NSF OPP) | |
NSF Office of Polar Programs (formerly NSF PLR) (NSF OPP) | |
NSF Office of Polar Programs (formerly NSF PLR) (NSF OPP) |