Dataset: Tail wave amplitude from 5 high-speed video frames at 3 temperatures from Oikopleura dioica particle tracking experiments conducted in December 2015

ValidatedFinal no updates expectedDOI: 10.26008/1912/bco-dmo.897825.1Version 1 (2023-06-22)Dataset Type:experimental

Principal Investigator: Brad J. Gemmell (University of South Florida)

Principal Investigator, Contact: Kelly Rakow Sutherland (University of Oregon)

Scientist: Keats R. Conley (University of Oregon)

Scientist: Terra C. Hiebert (University of Oregon)

Scientist: George von Dassow (University of Oregon)

BCO-DMO Data Manager: Shannon Rauch (Woods Hole Oceanographic Institution)


Project: Collaborative Research: Comparative feeding by gelatinous grazers on microbial prey (Gelatinous Grazer Feeding)


Abstract

These data include tail beat kinematics measurements and particle tracking from the appendicularian Oikopleura dioica during experiments conducted in December 2015 at the Sars Centre for Marine Molecular Biology in Bergen, Norway. The data were collected from high-speed video frames. The experiments comprised 3 temperature treatments. This dataset includes measurements of tail wave amplitude. Tail beat kinematic measurements were used to describe how O. dioica drives flow across food concent...

Show more

All experimental animals were obtained from the appendicularian culture facility at the Sars Centre for Marine Molecular Biology in Bergen, Norway in December 2015. Oikopleura dioica were filmed individually following Gemmell et al. (2014). Images were recorded using an Edgertronic high-speed camera (1280 × 1024-pixel resolution, 500 frames per second) with brightfield illumination from a fiber optic light source, or a Photron FastCam Mini Ux100 (1280x1024, 125-1000 frames per second) with darkfield illumination from a tilting mirror base. The filming vessel was positioned on a manually adjustable stage between the light source and the camera. A long working-distance microscope objective (4x or 40x) was mounted to an adjustable-height optics clamp positioned between the filming vessel and the camera. Videos were converted to image stacks in QuickTime Pro. Day 1 animals were filmed in a 50-milliliter glass cuvette in treatments comprising 3 temperatures: 5° Celsius, 15° Celsius, and 25° Celsius.

The videos are attached as Supplemental Files (there is one .zip folder for each temperature treatment).


Related Datasets

IsRelatedTo

Dataset: Filter area measurements from Oikopleura dioica experiments
Gemmell, B. J., Sutherland, K. R., Conley, K. R., Hiebert, T. C., von Dassow, G. (2023) Filter area measurements from Oikopleura dioica tail beat kinematics and particle tracking experiments conducted in December 2015. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2023-06-15 doi:10.26008/1912/bco-dmo.897665.1
IsRelatedTo

Dataset: Inlet particle speeds in Oikopleura dioica at 3 temperature treatments
Gemmell, B. J., Sutherland, K. R., Conley, K. R., Hiebert, T. C., von Dassow, G. (2023) Inlet particle speeds from 5 high-speed video frames at 3 temperature treatments from Oikopleura dioica particle tracking experiments conducted in December 2015. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2023-06-15 doi:10.26008/1912/bco-dmo.897682.1
IsRelatedTo

Dataset: Tail beat frequency in Oikopleura dioica at 3 temperature treatments
Gemmell, B. J., Sutherland, K. R., Conley, K. R., Hiebert, T. C., von Dassow, G. (2023) Tail beat frequency in the appendicularian Oikopleura dioica during particle tracking experiments comprised of three temperature treatments conducted in December 2015. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2023-06-15 doi:10.26008/1912/bco-dmo.897617.1

Related Publications

Results

Hiebert, TC, Gemmell, BJ, von Dassow, G, Conley, KR, & Sutherland, KR. (Under Review). The hydrodynamics and kinematics of the appendicularian tail underpin peristaltic pumping.
Methods

Gemmell, B. J., Jiang, H., & Buskey, E. J. (2014). A new approach to micro-scale particle image velocimetry (µPIV) for quantifying flows around free-swimming zooplankton. Journal of Plankton Research, 36(5), 1396–1401. https://doi.org/10.1093/plankt/fbu067