Contributors | Affiliation | Role |
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Dorgan, Kelly | Dauphin Island Sea Lab (DISL) | Principal Investigator |
Clemo, William Cyrus | University of South Alabama (USA) | Student |
Soenen, Karen | Woods Hole Oceanographic Institution (WHOI BCO-DMO) | BCO-DMO Data Manager |
Sediment cores (9.6 cm inner diameter) were collected with an Ocean Instruments MC-400 multicorer or via SCUBA diving at each site and timepoint. Grain size was measured in the top 8-12 cm of sediment. 1-2 cores were sectioned into 1 cm increments and dried at 65 °C for 48 h. Dried samples were placed in a muffle furnace at 550 °C for 4 h to combust sediment organic matter. Porosity and organic content were calculated from the sediment mass differences before and after drying and combusting, respectively. Combusted sediment was then placed in a 1% sodium hexametaphosphate solution for at least 3 weeks to deflocculate. After weeks of deflocculating, clumps of mud often remained intact in muddier samples, so all samples were gently rubbed with a gloved finger on a 63 μm sieve to break up mud clumps. The mud was then washed through the sieve and combined with the sand retained on the sieve. After breaking up clumps, we measured grain size distribution using a Malvern Mastersizer 3000. For each sample, 5 measurements were averaged and then analyzed using Gradistat (Kenneth Pye Associates, LTD.).
Bottom water salinity and temperature (° C) measured at each site and timepoint using a CTD (conductivity, temperature, depth) instrument array.
For each sediment sample, 5 Malvern Mastersizer measurements were averaged and then analyzed using Gradistat v9.1 (Kenneth Pye Associates, LTD.).
File |
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916071_v1_sediment.csv (Comma Separated Values (.csv), 818.79 KB) MD5:429884cd7abab2b30990082db029cf7b Primary data file for dataset ID 916071, version 1 |
Parameter | Description | Units |
Site | Site name includes transect (W: West, M: Middle, E: East) and depth (05: 5m, 12: 12m, 20: 20m) at which samples were collected | unitless |
Latidude | site latitude, south is negative | decimal degrees |
Longitude | site longitude, west is negative | decimal degrees |
WaterDepth_m | site depth | m |
Date | sampling date | calendar date |
TimeAfterSally_d | days after Hurricane Sally landfall | days |
Salinity | site bottom water salinity | unitless |
Temperature_degC | site bottom water temperature | degrees Celsius |
Replicate | core replicate number | unitless |
SedimentDepth_cm | core sediment section depth | cm |
WaterContentFraction | sediment water content | unitless |
PorosityFraction | sediment porosity | unitless |
OrganicContentFraction | sediment organic content | unitless |
MEANGrainSize_um | mean grain size, um scale | um |
SORTING_um | grain size sorting, um scale | unitless |
SKEWNESS_um | grain size skewness, um scale | unitless |
KURTOSIS_um | grain size kurtosis, um scale | unitless |
MEANGrainSize_phi | mean grain size, phi scale | phi |
SORTING_phi | grain size sorting, phi scale | unitless |
SKEWNESS_phi | grain size skewness, phi scale | unitless |
KURTOSIS_phi | grain size kurtosis, phi scale | unitless |
MEANGrainSizeDescription | mean grain size description | unitless |
SORTINGDescription | grain size sorting description | unitless |
SKEWNESSDescription | grain size skewness description | unitless |
KURTOSISDescription | grain szie kurtosis description | unitless |
MODE1_um | grain size mode 1, um scale | um |
MODE2_um | grain size mode 2, um scale | um |
MODE3_um | grain size mode 3, um scale | um |
MODE1_phi | grain size mode 1, phi scale | phi |
MODE2_phi | grain size mode 2, phi scale | phi |
MODE3_phi | grain size mode 3, phi scale | phi |
D10_um | 10th percentile of grain size, um scale | um |
D50_um | 50th percentile of grain size, um scale | um |
D90_um | 90th percentile of grain size, um scale | um |
D10_phi | 10th percentile of grain size, phi scale | phi |
D50_phi | 50th percentile of grain size, phi scale | phi |
D90_phi | 90th percentile of grain size, phi scale | phi |
GRAVELFraction | sample fraction consisting of gravel-sized particles | unitless |
SANDFraction | sample fraction consisting of sand-sized particles | unitless |
MUDFraction | sample fraction consisting of mud-sized particles | unitless |
VCOARSEGRAVELFraction | sample fraction consisting of very coarse gravel-sized particles | unitless |
COARSEGRAVELFraction | sample fraction consisting of coarse gravel-sized particles | unitless |
MEDIUMGRAVELFraction | sample fraction consisting of medium gravel-sized particles | unitless |
FINEGRAVELFraction | sample fraction consisting of fine gravel-sized particles | unitless |
VFINEGRAVELFraction | sample fraction consisting of very fine gravel-sized particles | unitless |
VCOARSESANDFraction | sample fraction consisting of very coarse sand-sized particles | unitless |
COARSESANDFraction | sample fraction consisting of coarse sand-sized particles | unitless |
MEDIUMSANDFraction | sample fraction consisting of medium sand-sized particles | unitless |
FINESANDFraction | sample fraction consisting of fine sand-sized particles | unitless |
VFINESANDFraction | sample fraction consisting of very fine sand-sized particles | unitless |
VCOARSESILTFraction | sample fraction consisting of very coarse silt-sized particles | unitless |
COARSESILTFraction | sample fraction consisting of coarse silt-sized particles | unitless |
MEDIUMSILTFraction | sample fraction consisting of medium silt-sized particles | unitless |
FINESILTFraction | sample fraction consisting of fine silt-sized particles | unitless |
VFINESILTFraction | sample fraction consisting of very fine silt-sized particles | unitless |
CLAYFraction | sample fraction consisting of clay-sized particles | unitless |
grainsize_3500 | Mastersizer grain size class: 3500 um | um |
grainsize_3080 | Mastersizer grain size class: 3080 um | um |
grainsize_2710 | Mastersizer grain size class: 2710 um | um |
grainsize_2390 | Mastersizer grain size class: 2390 um | um |
grainsize_2100 | Mastersizer grain size class: 2100 um | um |
grainsize_1850 | Mastersizer grain size class: 1850 um | um |
grainsize_1630 | Mastersizer grain size class: 1630 um | um |
grainsize_1430 | Mastersizer grain size class: 1430 um | um |
grainsize_1260 | Mastersizer grain size class: 1260 um | um |
grainsize_1110 | Mastersizer grain size class: 1110 um | um |
grainsize_976 | Mastersizer grain size class: 976 um | um |
grainsize_859 | Mastersizer grain size class: 859 um | um |
grainsize_756 | Mastersizer grain size class: 756 um | um |
grainsize_666 | Mastersizer grain size class: 666 um | um |
grainsize_586 | Mastersizer grain size class: 586 um | um |
grainsize_516 | Mastersizer grain size class: 516 um | um |
grainsize_454 | Mastersizer grain size class: 454 um | um |
grainsize_400 | Mastersizer grain size class: 400 um | um |
grainsize_352 | Mastersizer grain size class: 352 um | um |
grainsize_310 | Mastersizer grain size class: 310 um | um |
grainsize_272 | Mastersizer grain size class: 272 um | um |
grainsize_240 | Mastersizer grain size class: 240 um | um |
grainsize_211 | Mastersizer grain size class: 211 um | um |
grainsize_186 | Mastersizer grain size class: 186 um | um |
grainsize_163 | Mastersizer grain size class: 163 um | um |
grainsize_144 | Mastersizer grain size class: 144 um | um |
grainsize_127 | Mastersizer grain size class: 127 um | um |
grainsize_111 | Mastersizer grain size class: 111 um | um |
grainsize_98_1 | Mastersizer grain size class: 98.1 um | um |
grainsize_86_4 | Mastersizer grain size class: 86.4 um | um |
grainsize_76 | Mastersizer grain size class: 76 um | um |
grainsize_66_9 | Mastersizer grain size class: 66.9 um | um |
grainsize_58_9 | Mastersizer grain size class: 58.9 um | um |
grainsize_51_8 | Mastersizer grain size class: 51.8 um | um |
grainsize_45_6 | Mastersizer grain size class: 45.6 um | um |
grainsize_40_1 | Mastersizer grain size class: 40.1 um | um |
grainsize_35_3 | Mastersizer grain size class: 35.3 um | um |
grainsize_31_1 | Mastersizer grain size class: 31.1 um | um |
grainsize_27_4 | Mastersizer grain size class: 27.4 um | um |
grainsize_24_1 | Mastersizer grain size class: 24.1 um | um |
grainsize_21_2 | Mastersizer grain size class: 21.2 um | um |
grainsize_18_7 | Mastersizer grain size class: 18.7 um | um |
grainsize_16_4 | Mastersizer grain size class: 16.4 um | um |
grainsize_14_5 | Mastersizer grain size class: 14.5 um | um |
grainsize_12_7 | Mastersizer grain size class: 12.7 um | um |
grainsize_11_2 | Mastersizer grain size class: 11.2 um | um |
grainsize_9_86 | Mastersizer grain size class: 9.86 um | um |
grainsize_8_68 | Mastersizer grain size class: 8.68 um | um |
grainsize_7_64 | Mastersizer grain size class: 7.64 um | um |
grainsize_6_72 | Mastersizer grain size class: 6.72 um | um |
grainsize_5_92 | Mastersizer grain size class: 5.92 um | um |
grainsize_5_21 | Mastersizer grain size class: 5.21 um | um |
grainsize_4_58 | Mastersizer grain size class: 4.58 um | um |
grainsize_4_03 | Mastersizer grain size class: 4.03 um | um |
grainsize_3_55 | Mastersizer grain size class: 3.55 um | um |
grainsize_3_12 | Mastersizer grain size class: 3.12 um | um |
grainsize_2_75 | Mastersizer grain size class: 2.75 um | um |
grainsize_2_42 | Mastersizer grain size class: 2.42 um | um |
grainsize_2_13 | Mastersizer grain size class: 2.13 um | um |
grainsize_1_88 | Mastersizer grain size class: 1.88 um | um |
grainsize_1_65 | Mastersizer grain size class: 1.65 um | um |
grainsize_1_45 | Mastersizer grain size class: 1.45 um | um |
grainsize_1_28 | Mastersizer grain size class: 1.28 um | um |
grainsize_1_13 | Mastersizer grain size class: 1.13 um | um |
grainsize_0_991 | Mastersizer grain size class: 0.991 um | um |
grainsize_0_872 | Mastersizer grain size class: 0.872 um | um |
grainsize_0_767 | Mastersizer grain size class: 0.767 um | um |
grainsize_0_675 | Mastersizer grain size class: 0.675 um | um |
grainsize_0_594 | Mastersizer grain size class: 0.594 um | um |
grainsize_0_523 | Mastersizer grain size class: 0.523 um | um |
grainsize_0_46 | Mastersizer grain size class: 0.46 um | um |
grainsize_0_405 | Mastersizer grain size class: 0.405 um | um |
grainsize_0_357 | Mastersizer grain size class: 0.357 um | um |
grainsize_0_314 | Mastersizer grain size class: 0.314 um | um |
grainsize_0_276 | Mastersizer grain size class: 0.276 um | um |
grainsize_0_243 | Mastersizer grain size class: 0.243 um | um |
grainsize_0_214 | Mastersizer grain size class: 0.214 um | um |
grainsize_0_188 | Mastersizer grain size class: 0.188 um | um |
grainsize_0_166 | Mastersizer grain size class: 0.166 um | um |
grainsize_0_146 | Mastersizer grain size class: 0.146 um | um |
grainsize_0_128 | Mastersizer grain size class: 0.128 um | um |
grainsize_0_113 | Mastersizer grain size class: 0.113 um | um |
grainsize_0_0995 | Mastersizer grain size class: 0.0995 um | um |
grainsize_0_0876 | Mastersizer grain size class: 0.0876 um | um |
grainsize_0_0771 | Mastersizer grain size class: 0.0771 um | um |
grainsize_0_0679 | Mastersizer grain size class: 0.0679 um | um |
grainsize_0_0597 | Mastersizer grain size class: 0.0597 um | um |
grainsize_0_0526 | Mastersizer grain size class: 0.0526 um | um |
grainsize_0_0463 | Mastersizer grain size class: 0.0463 um | um |
grainsize_0_0407 | Mastersizer grain size class: 0.0407 um | um |
grainsize_0_0358 | Mastersizer grain size class: 0.0358 um | um |
grainsize_0_0315 | Mastersizer grain size class: 0.0315 um | um |
grainsize_0_0278 | Mastersizer grain size class: 0.0278 um | um |
grainsize_0_0244 | Mastersizer grain size class: 0.0244 um | um |
grainsize_0_0215 | Mastersizer grain size class: 0.0215 um | um |
grainsize_0_0189 | Mastersizer grain size class: 0.0189 um | um |
grainsize_0_0167 | Mastersizer grain size class: 0.0167 um | um |
grainsize_0_0147 | Mastersizer grain size class: 0.0147 um | um |
grainsize_0_0129 | Mastersizer grain size class: 0.0129 um | um |
grainsize_0_0114 | Mastersizer grain size class: 0.0114 um | um |
grainsize_0_01 | Mastersizer grain size class: 0.01 um | um |
Dataset-specific Instrument Name | |
Generic Instrument Name | CTD - fixed |
Generic Instrument Description | A reusable instrument that always simultaneously measures conductivity and temperature (for salinity) and pressure (for depth).
This term applies to CTDs that are fixed and do not measure by profiling through the water column. For profiling CTDs, see https://www.bco-dmo.org/instrument/417. |
Dataset-specific Instrument Name | Ocean Instruments MC-400 multicorer |
Generic Instrument Name | Multi Corer |
Dataset-specific Description | Ocean Instruments MC-400 multicorer: Core collection. |
Generic Instrument Description | The Multi Corer is a benthic coring device used to collect multiple, simultaneous, undisturbed sediment/water samples from the seafloor. Multiple coring tubes with varying sampling capacity depending on tube dimensions are mounted in a frame designed to sample the deep ocean seafloor. For more information, see Barnett et al. (1984) in Oceanologica Acta, 7, pp. 399-408. |
Dataset-specific Instrument Name | Malvern Mastersizer 3000 |
Generic Instrument Name | Particle Size Analyzer |
Dataset-specific Description | Malvern Mastersizer 3000: Grain size analysis was done on a Malvern Mastersizer 3000 particle analyzer. |
Generic Instrument Description | Particle size analysis, particle size measurement, or simply particle sizing is the collective name of the technical procedures, or laboratory techniques which determines the size range, and/or the average, or mean size of the particles in a powder or liquid sample. |
NSF Award Abstract:
Marine sediments are important habitats for abundant and diverse communities of organisms that are important as food sources for higher trophic levels, including commercially important species. Through burrowing, constructing tubes, and feeding on sediments, these animals modify their physical and chemical environments to such an extent that they are considered ecosystem engineers. Bioturbation, the mixing of sediments by animals, is important in regenerating nutrients and transporting pollutants and carbon bound to mineral grains. Despite its importance, our ability to predict bioturbation rates and patterns from the community structure is poor, largely due to a lack of understanding of the mechanisms by which animals mix sediments. This project builds on earlier work showing that animals extend burrows through muddy sediments by fracture to test the hypothesis that the mechanical properties of sediments that affect burrowing mechanics also affect sediment mixing. More broadly, this project examines the relative contributions of (i) the functional roles of the organisms in the community, (ii) the mechanical properties of sediments, and (iii) factors that might increase or decrease animal activity such as temperature and food availability to bioturbation rates. Burrowing animals modify the physical properties of sediments, and this project quantifies these changes and tests the hypothesis that these changes are ecologically important and affect community succession following a disturbance. In addition to this scientific broader impact, this project involves development of instrumentation to measure sediment properties and includes a substantial education plan to introduce graduate, undergraduate, and middle school students to the important role that technology plays in marine science.
Through burrowing and feeding activities, benthic infauna mix sediments and modify their physical environments. Bioturbation gates the burial of organic matter, enhances nutrient regeneration, and smears the paleontological and stratigraphic record. However, current understanding of the mechanisms by which infaunal activities mix sediments is insufficient to predict the impacts of changes in infaunal community structure on important sediment ecosystem functions driven by bioturbation. This project tests specific hypotheses relating infaunal communities, bioturbation, and geotechnical properties with the ultimate goal of understanding the dynamic changes and potential feedbacks between infauna and their physical environments. This project integrates field and lab experiments to assess the relative importance of infaunal community structure and activities to bioturbation rates. Additionally, this project builds on recent work showing that muddy sediments are elastic gels through which worms extend burrows by fracture to propose that geotechnical properties of sediments mediate bioturbation by governing the release of particles from the sediment matrix during burrow extension. Finite element modeling determines how the release of particles by fracture during burrowing depends on the fracture toughness (cohesion) and stiffness (compaction) of sediments and complements laboratory experiments characterizing the impact of geotechnical properties on burrowing behaviors. The proposed research also aims to determine whether impacts of infauna on geotechnical properties are ecologically important. Changes in infaunal communities and geotechnical properties following an experimental physical disturbance address the hypothesis that ecosystem engineering of bulk sediment properties facilitates succession.
This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.
Funding Source | Award |
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NSF Division of Ocean Sciences (NSF OCE) |