Contributors | Affiliation | Role |
---|---|---|
Gaylord, Brian | University of California - Davis: Bodega Marine Laboratory (UC Davis-BML) | Principal Investigator |
Saley, Alisha | University of California - Davis: Bodega Marine Laboratory (UC Davis-BML) | Student |
Merchant, Lynne M. | Woods Hole Oceanographic Institution (WHOI BCO-DMO) | BCO-DMO Data Manager |
To provide ecological context for the laboratory dissolution experiments, we also measured the percent cover of periostracum of living California Mytilus californianus mussels in the field, focusing on mussels inhabiting different microhabitats within the intertidal zone. We sampled mussels across two tidal heights and three levels of sun exposure on 17 July and 18 August 2022 from the same population (Marshall Gulch Beach, California) where we had collected mussels for the laboratory trials (see the related BCO-DMO datasets). We sampled from the topmost layer of mussels within a 20 cm x 20 cm quadrat positioned within the center of each of 8 mussel beds at each tidal height (characterized as ‘high’ or low’, -0.3 – +0 m sea level height (SLH) and +0.3 - +1 m SLH), haphazardly choosing the first 20 adult individuals within a pre-selected size range (n = 113 mussels total, 54 mm + 4 mm SD). We characterized sun exposure based on the cardinal direction of the mussel bed orientation, which included mussels oriented 200° – 240° SW (termed ‘intense’), 30° – 70° NE (termed ‘average’), and 300° – 340° NW (termed ‘shade’). We photographed both valves of each mussel, ensuring a scale bar was visible in the field of view for use in ImageJ, and averaged the coverage of periostracum across the two valves as the metric of percent cover for a given individual.
Data analysis:
We performed computations with R statistical software, RStudio version 2023.06.2. We used a two-way ANOVA to compare average periostracum cover in adult mussels collected from the field at two relative tidal heights and three levels of sun exposure. We omitted the interaction term between the treatments after confirming it failed to explain significant variability in the model. Using tidal height and sun exposure as categorical predictors to explain periostracum cover, we then ran a TukeyHSD test (95% confidence) to identify which microhabitat types differed from one another via post-hoc, pairwise comparisons.
1) Processed the submitted file named ave.field_PUB.csv with the BCO-DMO tool Laminar.
BCO-DMO parameter naming convention is for names to only include alphanumeric characters and underscores. Periods in the parameter names have been replaced with underscores.
peri.sa renamed to peri_percent to clarify it represents a percent.
shell.l renamed to shell_L_avg to clarify it's an average
sa.tot renamed to shell_A_avg to clarify it's an average
Saved dataset to primary data file named 935484_v1_measurements_of_mussels_periostracum_cover.csv
2) Checked species taxonomy of mussel collected, Mytilus californianus, and created a taxonomy file using information from the World Register of Marine Species (WoRMS: marinespecies.org) with columns: ScientificName, AphiaID, LSID, Authority, Kingdom, Phylum, Class, Order, Family, Genus, Species
File |
---|
935484_v1_measurements_of_mussels_periostracum_cover.csv (Comma Separated Values (.csv), 11.28 KB) MD5:bcbf09663cc0aa1dac19ac7b58dad6d0 Primary data file for dataset ID 935484, version 1 |
File |
---|
Species taxonomy filename: species_taxonomy.csv (Comma Separated Values (.csv), 240 bytes) MD5:6adb15fd7f2eba705b30b09b7a827689 Species taxonomy from the World Register of Marine Species (WoRMS: marinespecies.org) with columns: ScientificName, AphiaID, LSID, Authority, Kingdom, Phylum, Class, Order, Family, Genus, SpeciesColumn descriptionsScientificName: Genus and Species nameAphiaID: Unique taxonomic identifier at the World Register of Marine Species (WoRMS: marinespecies.org)LSID: The Life Sciences Identifier (LSID) is an Interoperable Informatics Infrastructure Consortium (I3C) and OMG Life Sciences Research (LSR) Uniform Resource Name (URN) specification in progress.Authority: The taxonomic authority is the surname of the person who first described the species |
Parameter | Description | Units |
ID | Shell ID: identification number of individual mussel valve | unitless |
species | Mussel species | unitless |
lat | latitude, South is negative | deicmal degrees |
lon | longitude, West is negative | decimal degrees |
date_start | collection start date | unitless |
date_end | collection end date | unitless |
light | Microhabitat: sun exposure based on the cardinal direction of the mussel bed orientation, which included mussels oriented 200° – 240° SW (termed ‘intense’), 30° – 70° NE (termed ‘average’), and 300° – 340° NW (termed ‘shade’): N (shady), M (average), or F (intense) | unitless |
height | Microhabitat: tidal height: tidal height characterized as ‘high’ (HT) or low’ (LT) based on measured sea level height (-0.3 – +0 m sea level height (SLH) and +0.3 - +1 m SLH) | unitless |
peri_percent | Periostracum cover: percent cover of intact periostracum over mussel valve | percentage (%) |
shell_L_avg | Valve length: average value between longest measured length of both mussel valves (ImageJ) | milimeter (mm) |
shell_A_avg | Shell area: average mussel valve area measurement between both mussel valves (ImageJ) | milimeters squared (mm^2) |
Dataset-specific Instrument Name | camera |
Generic Instrument Name | Camera |
Generic Instrument Description | All types of photographic equipment including stills, video, film and digital systems. |
NSF Award Abstract:
This research is exploring the capacity of coastal organisms to cope with alterations in seawater chemistry driven by both freshwater inputs and absorption of carbon dioxide into the world's oceans (ocean acidification). The project focuses on calcification responses and behavioral impairments of shoreline animals under altered seawater chemistry, and forefronts a common mussel species (the California mussel), and a common snail (the black turban snail), each abundant on rocky shores along the west coast of North America. The target species operate as exemplar organisms for characterizing the responses of marine invertebrates more generally. Methods involve experimental decoupling of multiple components of the carbonate system of seawater to isolate drivers that are difficult to separate otherwise. Broader impacts include transfer of scientific information to policy-makers, including legislators, as well as training and skill-set development of future generations of scientists and citizens. One Ph.D. student is supported, as are UC Davis undergraduates conducting mentored research. The project also provides research internships for undergraduates from a local community college (Santa Rosa Junior College), many of whom are from underrepresented groups. The latter project component substantially bolsters an ongoing program at Bodega Marine Laboratory that includes efforts in diversity, equity, and inclusion. Data and interpretations from the project are feeding into an existing educational program that links to local K-12 schools and reaches ~10,000 members of the public each year.
Overall, the research of the project is dissecting drivers of calcification and behavioral disruption in key shoreline invertebrates, across present-day and future carbonate system conditions appropriate to coastal marine environments. Efforts are exploring the extent to which calcification depends on one versus multiple parameters of the seawater carbonate system. In particular, existing conceptual models emphasize the importance of calcium carbonate saturation state (Ω) and/or the ratio of bicarbonate to hydrogen ion concentrations ([HCO3-]/[H+]), and the project is examining these mechanisms as well as the possibility that more than one driver acts simultaneously. It is doing so both in bivalves and in gastropods to test for generality across mollusks. The project is additionally examining whether pH is the only carbonate system factor contributing to known patterns of behavioral impairment in marine invertebrates. Leading explanations for debilitating behaviors induced by ocean acidification involve altered ion channel function, but discussion in the literature continues, and studies that explicitly decouple the carbonate system are necessary.
This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.
Funding Source | Award |
---|---|
NSF Division of Ocean Sciences (NSF OCE) |