Data and code from an analysis of twenty years of winter minimum temperature data near Port Fourchon, LA from 2002 to 2022

Website: https://www.bco-dmo.org/dataset/941490
Data Type: Other Field Results
Version: 1
Version Date: 2024-10-28

Project
» CAREER: Integrating Seascapes and Energy Flow: learning and teaching about energy, biodiversity, and ecosystem function on the frontlines of climate change (Louisiana E-scapes)
ContributorsAffiliationRole
Nelson, JamesUniversity of Georgia (UGA)Principal Investigator
Leavitt, HerbertUniversity of Georgia (UGA)Student
Thomas, AlexanderUniversity of Georgia (UGA)Student
York, Amber D.Woods Hole Oceanographic Institution (WHOI BCO-DMO)BCO-DMO Data Manager

Abstract
This dataset analyzes twenty years of winter minimum temperature data from the Louisiana Coast Wide Reference Monitoring Systems database using 11 stations of data closest to the sampling locations for the primary project. We downloaded monthly averaged data from 2002 to 2022 from each site and used these values to calculate our minimum temperature data. This dataset was published in Leavitt et al. (2024; pre-print DOI 10.22541/au.173090741.17018561/v1).


Coverage

Location: near Port Fourchon, Louisiana, USA
Spatial Extent: N:29.32451 E:-90.04584 S:29.14136 W:-90.38727
Temporal Extent: 2006 - 2023

Methods & Sampling

Location description:  All data for this analysis were collected near Port Fourchon, Louisiana, USA (29.10 °N, 90.19 °W). The marshes around the port are microtidal, with a mean tidal range of ~0.37 m. The site sits at the precise edge of black mangrove expansion into saltmarsh habitats and although some land loss in the areas has occurred, mangroves in the area have been expanding since the 1990s (Osland et al., 2013). 

Methods & Sampling:
     The expansion of mangroves, and many other range expanding species, is catalyzed by increasing winter temperatures (Osland et al., 2013). To verify that the winter temperatures are increasing in Port Fourchon we used data from the Coastal Protection and Restoration Authority (CPRA) of Louisiana from the Coastwide Reference and Monitoring System (CRMS)-Wetlands Monitoring Data. We retrieved raw water temperature data from 2005 to 2022 for the CRMS sites closest to the species sampling locations (see files in "15465_CalendarYear_/" within supplemental file temperature_analysis_package.zip which were edited to remove empty columns). In total, we pulled data from 11 stations located in Barataria and Terrebonne Bay marshes (Retrieved from Coastal Information Management System (CIMS) database, 2023; Steyer, 2010). We used a regression analysis on the mean minimum temperature for the winter months (November-February) to determine the trend in temperature from 2005 until 2022 (see "temperature_figure.py" and "Temperature_Analysis_README.md" within temperature_analysis_package.zip).

Data Disclaimers (from State of Louisiana Coastal Protection and  Restoration Authority (CPRA) Data Dictionary v 2.0):

Data and information provided via CIMS has been carefully prepared from the best available sources using documented QA/QC standards. It is intended for general informational purposes only and should not be considered authoritative for navigational, engineering, other site-specific uses, or any other uses. The CPRA does not warrant or guarantee its accuracy, nor does CPRA assume any responsibility or liability for any reliance thereon. Elevation measurements are dependent upon the choices of standards that were used, including: vertical datums, geoids, ellipsoids, and various other factors. These factors should be considered when comparing elevation data between stations. Any CPRA data records that are labeled "Raw" (example:  "Raw Water Level") can potentially contain uncorrected errors.  For analytical purposes, data that are labeled "Adjusted" (Example:  "Adjusted Water Level") should be used whenever available. 

See related publications Folse et al. (2023) and Wager & Haywood (2024) for CPRA and CIMS Data Dictionary v2.0 and standard operation procedures.


Data Processing Description

The data was processed using python code.  See the Supplemental File temperature_analysis_package.zip which contains  "temperature_figure.py" and "Temperature_Analysis_README.md" as well as source data in the format used by this code.


BCO-DMO Processing Description

Dataset 941490 version 1:

- Details clarified by the data submitter were added to Temperature_Analysis_README.md before zipping data and code into temperature_analysis_package.zip and attaching to this dataset as a supplemental file.
- 15465_Read_Me.docx converted to pdf, referenced SOP in this document was added to "Related Publications" section.
- The primary data table dataset 941490_v1_port_fourchon_montly_temps.csv was created by importing "All_sites_by_month_water_temperature.csv" from the processing package and joining coordinates in from "15465_CalendarYear_/15465_Coordinates.csv"
- Column names adjusted to conform to BCO-DMO naming conventions designed to support broad re-use by a variety of research tools and scripting languages. [Only numbers, letters, and underscores.  Can not start with a number]


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Data Files

File
941490_v1_port_fourchon_montly_temps.csv
(Comma Separated Values (.csv), 161.91 KB)
MD5:6244c4b4bf7a71b6d0bf23c0a864599a
Primary data file for dataset ID 941490, version 1. This data table combines "All_sites_by_month_water_temperature.csv" and coordinates from "15465_CalendarYear_/15465_Coordinates.csv" which are available in temperature_analysis_package.zip (See Supplemental Files).

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Supplemental Files

File
Habitat Classification and Temperature Analysis Processing Package
filename: temperature_analysis_package.zip
(ZIP Archive (ZIP), 349.47 KB)
MD5:fde76900897e7af4964f459b0e25d15c
Habitat classification and temperature analysis processing package which includes source files in the format needed for use with python script temperature_figure.py
which creates `winter_min_temp_plot_600dpi.png` which corresponds to Figure 2 of Leavitt et al. (2024, pre-print DOI 10.22541/au.173090741.17018561/v1).
- Winter months (December–February) were analyzed for trends in minimum temperatures.
- Linear regression was applied to determine temperature trends over time.

See Temperature_Analysis_README.md within this .zip package for more details.

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Related Publications

Folse, T. M., McGinnis, T. E., Sharp, L. A., West, J. L., Hymel, M. K., Troutman, J. P., Weifenbach, D., Boshart, W. M., Rodrigue, L. B., Richardi, D. C., Wood, W. B., Miller, C. M., Robinson, E. M., Freeman, A. M., Stagg, C. L., Couvillion, B. R., & Beck, H. J. (2023). A standard operating procedures manual for the Coastwide Reference Monitoring System-Wetlands and the System-Wide Assessment and Monitoring Program: Methods for site establishment, data collection, and quality assurance/quality control. Louisiana Coastal Protection and Restoration Authority. Baton Rouge, LA. 252 pp. https://cims.coastal.la.gov/RecordDetail.aspx?Root=0&sid=25156
Methods
Leavitt, H., Thomas, A., Doerr, J., Johnson, D., & Nelson, J. (2024). Generalists and competition may be important in limiting range expansion, evidence from the frontlines of climate change. https://doi.org/10.22541/au.173090741.17018561/v1
Results
Osland, M. J., Enwright, N., Day, R. H., & Doyle, T. W. (2013). Winter climate change and coastal wetland foundation species: salt marshes vs. mangrove forests in the southeastern United States. Global Change Biology, 19(5), 1482–1494. Portico. https://doi.org/10.1111/gcb.12126
Methods
Steyer, G. D. (2010). Coastwide Reference Monitoring System (CRMS). Fact Sheet. (Issues 2327–6932). https://doi.org/10.3133/fs20103018
Methods
Wager, R., & Haywood, E. L. III. (2024). Coastal Information Management System (CIMS) Data Dictionary (Version 2.0) [General Programmatic Document]. Louisiana Coastal Protection and Restoration Authority. Retrieved from https://cims.coastal.la.gov/RecordDetail.aspx?Root=0&sid=11505#
Methods

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Related Datasets

IsRelatedTo
Leavitt, H., Thomas, A., Nelson, J. (2024) Black mangrove habitat change analysis in Port Fourchon, LA from 2002, 2014, and 2022. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2024-12-20 http://lod.bco-dmo.org/id/dataset/941477 [view at BCO-DMO]
Relationship Description: Data collected as part of the same study published in Leavitt et al. (2024).
Nelson, J., Leavitt, H., Thomas, A. (2024) Port Fourchon, LA species range data from presence and absence data from 2002, 2014, and 2022. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2024-10-24 http://lod.bco-dmo.org/id/dataset/941250 [view at BCO-DMO]
Relationship Description: Data collected as part of the same study published in Leavitt et al. (2024).
IsDerivedFrom
Coastal Protection and Restoration Authority (CPRA) of Louisiana. (2024). Coastal Information Management System (CIMS) database (https://cims.coastal.louisiana.gov). CRMS Stations Air Temperature Data Accessed August 2024.

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Parameters

ParameterDescriptionUnits
Station_id

CRMS station identifier. See more on Hydrographic station naming conventions in temperature_analysis_package.zip->/15465_CalendarYear_/15465_Read Me.pdf

unitless
Latitude

description

decimal degrees
Longitude

description

decimal degrees
month

Month of observation

unitless
year

Year of observation.

unitless
avg_temperature

Mean water temperature in degrees Celsius.

degrees Celsius
std_deviation_water_temperature

Standard deviation of water temperature

degrees Celsius
min_temperature

Minimum recorded water temperature (for year, month)

degrees Celsius
max_temperature

Maximum recorded water temperature (for year, month)

degrees Celsius

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Project Information

CAREER: Integrating Seascapes and Energy Flow: learning and teaching about energy, biodiversity, and ecosystem function on the frontlines of climate change (Louisiana E-scapes)


Coverage: Saltmarsh ecosystem near Port Fourchon, LA


NSF Award Abstract:
Coastal marshes provide a suite of vital functions that support natural and human communities. Humans frequently take for granted and exploit these ecosystem services without fully understanding the ecological feedbacks, linkages, and interdependencies of these processes to the wider ecosystem. As demands on coastal ecosystem services have risen, marshes have experienced substantial loss due to direct and indirect impacts from human activity. The rapidly changing coastal ecosystems of Louisiana provide a natural experiment for understanding how coastal change alters ecosystem function. This project is developing new metrics and tools to assess food web variability and test hypotheses on biodiversity and ecosystem function in coastal Louisiana. The research is determining how changing habitat configuration alters the distribution of energy across the seascape in a multitrophic system. This work is engaging students from the University of Louisiana Lafayette and Dillard University in placed-based learning by immersing them in the research and local restoration efforts to address land loss and preserve critical ecosystem services. Students are developing a deeper understanding of the complex issues facing coastal regions through formal course work, directed field work, and outreach. Students are interacting with stakeholders and managers who are currently battling coastal change. Their directed research projects are documenting changes in coastal habitat and coupling this knowledge with the consequences to ecosystems and the people who depend on them. By participating in the project students are emerging with knowledge and training that is making them into informed citizens and capable stewards of the future of our coastal ecosystems, while also preparing them for careers in STEM. The project is supporting two graduate students and a post-doc.

The transformation and movement of energy through a food web are key links between biodiversity and ecosystem function. A major hurdle to testing biodiversity ecosystem function theory is a limited ability to assess food web variability in space and time. This research is quantifying changing seascape structure, species diversity, and food web structure to better understand the relationship between biodiversity and energy flow through ecosystems. The project uses cutting edge tools and metrics to test hypotheses on how the distribution, abundance, and diversity of key species are altered by ecosystem change and how this affects function. The hypotheses driving the research are: 1) habitat is a more important indirect driver of trophic structure than a direct change to primary trophic pathways; and 2) horizontal and vertical diversity increases with habitat resource index. Stable isotope analysis is characterizing energy flow through the food web. Changes in horizontal and vertical diversity in a multitrophic system are being quantified using aerial surveys and field sampling. To assess the spatial and temporal change in food web resources, the project is combining results from stable isotope analysis and drone-based remote sensing technology to generate consumer specific energetic seascape maps (E-scapes) and trophic niche metrics. In combination these new metrics are providing insight into species’ responses to changing food web function across the seascape and through time.

This project is jointly funded by Biological Oceanography and the Established Program to Stimulate Competitive Research (EPSCoR).

This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.



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Funding

Funding SourceAward
NSF Division of Ocean Sciences (NSF OCE)

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