Dataset: 16S microbiome data for artificial reef sponges and seawater
View Data: Data not available yet
Data Citation:
Easson, C. G., Freeman, C. J., Fiore, C. L., Thacker, R. W. (2025) 16S microbiome metadata collected from shallow artificial reef sponges and seawater in the Florida Keys, USA from Apr 2021 to Aug 2021. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2025-02-21 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/953999 [access date]
Terms of Use
This dataset is licensed under Creative Commons Attribution 4.0.
If you wish to use this dataset, it is highly recommended that you contact the original principal investigators (PI). Should the relevant PI be unavailable, please contact BCO-DMO (info@bco-dmo.org) for additional guidance. For general guidance please see the BCO-DMO Terms of Use document.
Spatial Extent: N:24.576 E:-81.369 S:24.538 W:-81.423
These data were generated on shallow reefs (<10m) in the Florida Keys, USA.
Temporal Extent: 2021-04 - 2021-08
Project:
Collaborative Research: Investigations into microbially mediated ecological diversification in sponges
(Ecological Diversification in Sponges)
Principal Investigator:
Cole G. Easson (Middle Tennessee State University)
Co-Principal Investigator:
Cara L. Fiore (Appalachian State University)
Christopher J. Freeman (College of Charleston, CofC)
Robert W. Thacker (Stony Brook University, SUNY Stony Brook)
BCO-DMO Data Manager:
Audrey Mickle (Woods Hole Oceanographic Institution, WHOI BCO-DMO)
Version:
1
Version Date:
2025-02-21
Restricted:
No
Validated:
No
Current State:
Preliminary and in progress
16S microbiome metadata collected from shallow artificial reef sponges and seawater in the Florida Keys, USA from Apr 2021 to Aug 2021
Abstract:
Sponges are a dominant component of coral reefs worldwide and in the Caribbean, where their biomass exceeds that of reef-building corals. For almost a quarter century, the success of sponges in the Caribbean has been linked to their filter-feeding ability. However, recent work demonstrated that coexisting sponges on Caribbean reefs host unique communities of bacteria that might allow sponges to access multiple pools of nutrients that are not available to other organisms. In this project, the investigators will test the hypothesis that ecologically dominant sponge species in the Caribbean have unique metabolic strategies that are mediated by their associations with microbes that live within the sponge body.
In this dataset, we present the 16S rRNA microbiome NCBI accession and sample collection metadata for an artificial reef experiment where sponges of 10 species were placed on this temporary reef from April to August of 2021 and sampled using VacuSIP. VacuSIP methods capture incurrent (In) and excurrent (Ex) water from each sponge specimen. Incurrent represents the bacteria that are available for the sponge to consume via filter feeding and excurrent represents the bacteria that remain once sponges have consumed their preferred taxa. Additionally, we have provided microbiome metadata for the host sponges for several of these paired In/Ex samples. See the related dataset, NCBI Bioproject PRJNA1179970, for all sequence data. Microbiome data was generated using protocols from the Earth Microbiome project and sequencing was conducted on an Illumina MiSeq at Middle Tennessee State University. The data available at NCBI represents raw sequencing data, and no quality checks or sequencing filtering has been done on the uploaded sequences.