| Oxygen consumption and metabolic enzyme activity in the Antarctic coral, Flabellum impensum from RVIB Nathaniel B. Palmer NBP1002 in the Western Antarctic Peninsula, Mar.- May 2010 (CARIACO-micronek project, Antarctic_micronek project) | Studies cited in the paper that represents these data.
| Source_Year |
| Siderophore concentrations found in supernatants of Azotobacter vinelandii str. OP, Azotobacter chroococcum str. B3, and Azotobacter chroococcum str. NCIMB 8003 from laboratory experiments in 2015 | Citation and figure where data are published (see Related Publications for full citation)
| FigRef |
| Porites coral calcification responses to declining Ωar in a CO2 manipulation experiment in Palau versus the calcification responses observed in ten other studies of massive Porites corals | Reference for publication where data first appear
| reference |
| Reactive oxygen species are linked to the toxicity of the dinoflagellate Alexandrium spp. to protists | Figure number in Flores et al. (2012)
| Figure |
| Influence of predator-prey evolutionary history, chemical alarm-cues and feeding selection on induction of toxin production in a marine dinoflagellate | Figure number in Senft-Batoh et al. (2015)
| Figure |
| Results of cluster analysis and gene ontology: carbonate Organic Matrix (COM) proteins from coral, mollusk, and sea urchin; analyzed in the Falkowski lab at Rutgers from 2010-2014 (CROA project) | Reference paper. Refer to Supplemental Files for full citations.
| reference |
| Results of cluster analysis and gene ontology: cross-phyla clustering of non-redundant carbonate organic matrix proteins from coral, mollusk, and sea urchin grouped by hierarchical clustering; analyzed in the Falkowski lab at Rutgers from 2010-2014 | Reference paper for the coral species/coral accession number. See the Supplemental File "SI_Table_1_references.csv" for full citations.
| coral_reference |
| Results of cluster analysis and gene ontology: cross-phyla clustering of non-redundant carbonate organic matrix proteins from coral, mollusk, and sea urchin grouped by hierarchical clustering; analyzed in the Falkowski lab at Rutgers from 2010-2014 | Reference paper for the mollusk species/mollusk accession number. See the Supplemental File "SI_Table_1_references.csv" for full citations.
| mollusk_reference |
| Results of cluster analysis and gene ontology: cross-phyla clustering of non-redundant carbonate organic matrix proteins from coral, mollusk, and sea urchin grouped by hierarchical clustering; analyzed in the Falkowski lab at Rutgers from 2010-2014 | Reference paper for the sea urchin species/sea urchin accession number. See the Supplemental File "SI_Table_1_references.csv" for full citations.
| sea_urchin_reference |
| Compilation of MULVFS size-fractionated POC, PIC, and bSi data from 17 cruises conducted between 1973 and 2005 | Numbers to full references with more information about the samples. See Supplemental File "884057_References.pdf" for a list of the full citations.
| References |
| Depth ranges of occurrence for major functional groups of invertebrates, fish, and algae on global shallow and mesophotic reefs, 1973–2017 | abbreviated citation
| Publication_Short_title |
| DOP concentration observations from the global ocean between 1990 and 2021 (DOP N2 fixation and export production project) | data source
| reference |
| Log response ratios to seagrass edge and fragmentation effects from peer-reviewed literature | Short formatted reference (i.e., Able 2005); for complete citations refer the Supplemental File "864783_Complete_References.pdf".
| reference |
| Functional traits of colonists collected from colonization surfaces at the East Pacific Rise (EPR) deep-sea vents from 1998-2017 | If applicable, a citation for external protection. If no data were available and the external protection assignment is a null value (no value), “No reference” is used instead of a citation. If the external protection assignment was based on the direct observation of one of the co-authors, “Expert opinion” is used instead of a citation.
| EXTERNAL_PROTECTION_CITATION |
| Functional traits of colonists collected from colonization surfaces at the East Pacific Rise (EPR) deep-sea vents from 1998-2017 | If applicable, a citation for feeding method. If no data were available and the feeding method assignment is a null value (no value), “No reference” is used instead of a citation. If the feeding method assignment was based on the direct observation of one of the co-authors, “Expert opinion” is used instead of a citation.
| FEEDING_METHOD_CITATION |
| Functional traits of colonists collected from colonization surfaces at the East Pacific Rise (EPR) deep-sea vents from 1998-2017 | If applicable, a citation for habitat complexity. If no data were available and the habitat complexity assignment is a null value (no value), “No reference” is used instead of a citation. If the habitat complexity assignment was based on the direct observation of one of the co-authors, “Expert opinion” is used instead of a citation.
| HABITAT_COMPLEXITY_CITATION |
| Functional traits of colonists collected from colonization surfaces at the East Pacific Rise (EPR) deep-sea vents from 1998-2017 | If applicable, a citation for larval development. If no data were available and the larval development assignment is a null value (no value), “No reference” is used instead of a citation. If the larval development assignment was based on the direct observation of one of the co-authors, “Expert opinion” is used instead of a citation.
| LARVAL_DEVELOPMENT_CITATION |
| Functional traits of colonists collected from colonization surfaces at the East Pacific Rise (EPR) deep-sea vents from 1998-2017 | If applicable, a citation for maximum adult body size. If no data were available and the maximum adult body size value is a null value (no value), “No reference” is used instead of a citation. If the maximum adult body size value was based on the direct observation of one of the co-authors, “Expert opinion” is used instead of a citation.
| MAXIMUM_ADULT_BODY_SIZE_CITATION |
| Functional traits of colonists collected from colonization surfaces at the East Pacific Rise (EPR) deep-sea vents from 1998-2017 | If applicable, a citation for relative adult mobility. If no data were available and the mobility assignment is a null value (no value), “No reference” is used instead of a citation. If the mobility assignment was based on the direct observation of one of the co-authors, “Expert opinion” is used instead of a citation.
| RELATIVE_ADULT_MOBILITY_CITATION |
| Functional traits of colonists collected from colonization surfaces at the East Pacific Rise (EPR) deep-sea vents from 1998-2017 | If applicable, a citation for reproductive type. If no data were available and the reproductive type assignment is a null value (no value), “No reference” is used instead of a citation. If the reproductive type assignment was based on the direct observation of one of the co-authors, “Expert opinion” is used instead of a citation.
| REPRODUCTIVE_TYPE_CITATION |
| Functional traits of colonists collected from colonization surfaces at the East Pacific Rise (EPR) deep-sea vents from 1998-2017 | If applicable, a citation for trophic mode. If no data were available and the trophic mode assignment is a null value (no value), “No reference” is used instead of a citation. If the trophic mode assignment was based on the direct observation of one of the co-authors, “Expert opinion” is used instead of a citation.
| TROPHIC_MODE_CITATION |
| Genetic sequence identifiers for Etelis samples collected in the Indo-Pacific Ocean between 1997 and 2012 | Reference: specimen citation
| Reference |
| GenBank accession numbers and links for microbial isolates from sediment samples collected in Paleochori Bay, Milos Island, Greece during 2012 (Hydrothermal Autotrophic Carbon Fixation project) | reference
| reference_paper |
| Compiled dataset consisting of published and unpublished global nitrate d15N measurements from from 1975-2018 | Reference(s)
| reference |
| Seawater Nd isotopes and concentrations from the US-GEOTRACES North Atlantic zonal transect (NAZT), 2010 and 2011 on cruises KN199-04 and KN204-01, analyzed at LDEO | Publication reference; see Description for details
| Reference |
| Seawater Nd isotopes and concentrations from the US-GEOTRACES North Atlantic zonal transect (NAZT), 2010 and 2011 on cruises KN199-04 and KN204-01, analyzed by UHawaii | Publication reference; see Description for details
| Reference |
| Seawater Nd isotopes and concentrations from the US-GEOTRACES North Atlantic zonal transect (NAZT), 2010 and 2011 on cruises KN199-04 and KN204-01, analyzed by USC | Publication reference; see Description for details
| Reference |
| Reef Fish genetic accessions at NCBI Genbank from samples collected in the Indian Ocean, Pacific Ocean, and Red Sea from 2005 to 2015; related to 2016 publications | Journal publications these accessions were published in
| Journal_Publications |
| Reef Fish genetic accessions at NCBI Genbank from samples collected in the Indian Ocean, Pacific Ocean, and Red Sea from 2005 to 2015; related to 2016 publications | Digital object identifier (DOI) for the journal publications these accessions were published in
| Journal_Publication_DOI |
| Records and metadata for deep-sea hydrothermal vent parasite, egg predator, and micropredator species reported in published literature. | A full citation for the publication that describes the sample.
| CITATION |
| Marine and Freshwater Energy Density Data Integrated and Organized by Taxonomy from Previous Research Sources (1961 through June 2024) Discovered by a Literature Review | The publishing location of the original source of record, either a peer-reviewed journal or agency
| Publication_Journal |
| Marine and Freshwater Energy Density Data Integrated and Organized by Taxonomy from Previous Research Sources (1961 through June 2024) Discovered by a Literature Review | Classifying the type of source where data comes from as either one where data were measured by the authors (original) or collected from previous work (review)
| Publication_Type |
| Marine and Freshwater Energy Density Data Integrated and Organized by Taxonomy from Previous Research Sources (1961 through June 2024) Discovered by a Literature Review | The year when the original source on record was last updated/published. Does not equate to sample collection year(s).
| Publication_Year |
| List of Odontasteridae (Asteroidea) species used in study along with description reference, distribution, depth, and catalog numbers, Table 1 from Janosik & Halanych (2013) (Antarctic Inverts project) | published taxonomic description of the species
| reference |
| Outgroup species, description reference, and GenBank accession numbers from Table 2, from Janosik & Halanych (2013) (Antarctic Inverts project) | published taxonomic description of the species
| reference |
| Metadata for studies from meta-analysis investigating covariance between genetic and environmental (CovGE) effects in phenotypic results | where did data originate from paper
| Data_source |
| Metadata for studies from meta-analysis investigating covariance between genetic and environmental (CovGE) effects in phenotypic results | figure from which data was collected
| figure_Number |
| Metadata for studies from meta-analysis investigating covariance between genetic and environmental (CovGE) effects in phenotypic results | table from which data was collected
| table_Number |
| Microbial isolates from sediment samples collected in Paleochori Bay, Milos Island, Greece during 2012 (Hydrothermal Autotrophic Carbon Fixation project) | reference
| reference_paper |
| Abundances of mixotrophic, phototrophic, and heterotrophic nanoflagellates, and associated environmental data, synthesized from the scientific literature. | publication data are compiled from - full reference can be found in "publications" section of the BCO-DMO dataset landing page
| Study |
| Estimated thermal traits for phytoplankton | source publication; refer to supplemental file "data_sources.pdf" for complete citations
| study |
| Cell volume measurements for phytoplankton collected from the Kellogg Biological Station, MSU, Michigan in 2014 (Phytoplankton Traits project) | Citation for volume measurement
| volume_citation |
| Phytoplankton nutrient traits and data sources collected from the Kellogg Biological Station, MSU, Michigan in 2014 (Phytoplankton Traits project) | Publication code
| citation_code |
| Phytoplankton nutrient traits and data sources collected from the Kellogg Biological Station, MSU, Michigan in 2014 (Phytoplankton Traits project) | C per cell citation
| c_citation |
| Phytoplankton nutrient traits and data sources collected from the Kellogg Biological Station, MSU, Michigan in 2014 (Phytoplankton Traits project) | Citation for the original publication
| full_citation |
| Literature review of Ocean Acidification (OA) effects on phytoplankton (P-ExpEv project) | Source for the row's data.
| reference |
| Synthesis of publicly-available sequence datasets of the 16S rRNA gene in environmental DNA extracted from seafloor and subseafloor samples from the Dorado outcrop, Lō'ihi Seamount, North Pond, and Juan de Fuca Ridge flank | Digital Object Identitfyer information for publications that describe the original study for the data used here
| DOI |
| Synthesis of publicly-available sequence datasets of the 16S rRNA gene in environmental DNA extracted from seafloor and subseafloor samples from the Dorado outcrop, Lō'ihi Seamount, North Pond, and Juan de Fuca Ridge flank | Short hand code referencing the first author and location of a given study
| Study_Nickname |
| OTU, sequences, and accessions from long-term monitoring sites in St. John, USVI. | Reference
| Reference |
| Parasite taxonomic and life cycle information from literature | A citation for the dataset in which the parasite species or morphogroup was reported.
| DATA_SOURCE |
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