Parameter: reference_paper

Short Description:

reference_paper

Short Name:

reference_paper

Official Name:

reference_paper

Description

A list of papers referred to as a data column, or a publication referenced in a dataset or study.

Datasets associated with this parameter

Dataset Name	Brief Description	Project	PI-Supplied Parameter Name
Antarctic Coral Flabellum impensum metabolism	O2 consumption and metabolic enzyme activity in the Antarctic coral, Flabellum impensum	Antarctic_micronek, CARIACO-micronek	Source_Year
Azotobacter_SiderophoreConcentrations		Bacteria Iron Siderophores	FigRef
Calcification Comparison	Comparison of coral calcification response in Palau Porites coral to responses observed in ten other studies	Coral Reef Ecosystem OA Impact	reference
Chemical Defenses-1: Flores et al. 2012	Chemical Defenses-1: Flores et al. 2012	Chemical Defenses	Figure
Chemical Defenses-2: Senft-Batoh et al. 2015 (L&O)	Chemical Defenses-2: Senft-Batoh et al. 2015 (L&O)	Chemical Defenses	Figure
cluster analysis - Carbonate Organic Matrix proteins	Carbonate Organic Matrix (COM) proteins from coral, mollusk, and sea urchin.	CROA	reference
cluster analysis - cross-phyla protein clustering	Cross-phyla clustering of non-redundant carbonate organic matrix proteins grouped by hierarchical clustering.	CROA	coral_reference, mollusk_reference, sea_urchin_reference
Compilation of MULVFS size-fractionated POC, PIC, and bSi data	Compilation of MULVFS size-fractionated POC, PIC, and bSi data	VERTIGO, EqPac	References
Depth ranges for global mesophotic reefs	Depth ranges of occurrence on reefs	MCESponge	Publication_Short_title
DOPv2021	DOP concentration observations in the global ocean between 1990 and 2021.	DOP N2 fixation and export production	reference
Edge effects and fragmentation literature review	Edge effects and fragmentation literature review	Habitat Fragmentation	reference
EPR vent colonists functional traits		EPR Functional Diversity	MAXIMUM_ADULT_BODY_SIZE_CITATION, HABITAT_COMPLEXITY_CITATION, TROPHIC_MODE_CITATION, FEEDING_METHOD_CITATION, RELATIVE_ADULT_MOBILITY_CITATION, EXTERNAL_PROTECTION_CITATION, LARVAL_DEVELOPMENT_CITATION, REPRODUCTIVE_TYPE_CITATION
Etelis genetics		Hawaiian Fish Origins	Reference
GenBank accessions	GenBank accession numbers and links for microbial isolates from sediment samples collected at Paleochori Bay, Milos island, Greece	Hydrothermal Autotrophic Carbon Fixation	reference_paper
Global observed nitrate d15N	Published and unpublished nitrate d15N measurements	Fe Cycle Models and Observations	reference
GT10-11 - Neodymium - LDEO	seawater Nd isotopes and concentrations from the US-GEOTRACES North Atlantic zonal transect (NAZT)	U.S. GEOTRACES NAT	Reference
GT10-11 - Neodymium - UH	seawater Nd isotopes and concentrations from the US-GEOTRACES North Atlantic zonal transect (NAZT)	U.S. GEOTRACES NAT	Reference
GT10-11 - Neodymium - USC	seawater Nd isotopes and concentrations from the US-GEOTRACES North Atlantic zonal transect (NAZT)	U.S. GEOTRACES NAT	Reference
Hawaiian reef fish genetic accessions 2016	Genetic accessions at NCBI Genbank	Hawaiian Fish Origins	Journal_Publications, Journal_Publication_DOI
Hydrothermal vent parasite species reported in published literature	Literature review of deep-sea hydrothermal vent parasite, egg predator, and micropredator species	Vent Settlement Cues, EPR Functional Diversity	CITATION
Integrated Energy Density data of Marine and Freshwater Organisms	Synthesis of energy densities from literature review	NECC	Publication_Journal, Publication_Year, Publication_Type
Janosik_2013_T1: Odontasteridae species collection information	Odontasteridae species collection information	Antarctic Inverts	reference
Janosik_2013_T2: outgroup species and accessions	Outgroup species and accessions	Antarctic Inverts	reference
Metadata from meta-analysis on CovGE in phenotypic results	Metadata from Meta-Analysis on CovGE in phenotypic results	RCN ECS	Data_source, figure_Number, table_Number
Microbial isolates	Microbial isolates from sediment samples collected at Paleochori Bay, Milos island, Greece	Hydrothermal Autotrophic Carbon Fixation	reference_paper
Mixotrophic nanoflagellate abundances		Giant virus ecology	Study
Modeled thermal traits	PFT Thermal Response - Modeled thermal traits	Phytoplankton Community Responses	study
nutrient trait data: cell volumes	Phytoplankton nutrient traits and data sources	Phytoplankton Traits	volume_citation
nutrient utilization traits and citations	Phytoplankton nutrient traits and data sources	Phytoplankton Traits	c_citation, citation_code, full_citation
OA Lit Review	Literature review of Ocean Acidification (OA) effects on phytoplankton.	P-ExpEv	reference
Ocean Crust Microbiome Amplicon Metadata	Metadata for sequence datasets used in ocean crust microbiome survey	Slow Life in Crust	Study_Nickname, DOI
OTU and Sequences	OTU and sequences	St. John LTREB, RUI-LTREB	Reference
Parasite taxonomic and life cycle information	Literature review metazoan parasite species	EPR Functional Diversity, Vent Settlement Cues	DATA_SOURCE, LIFE_CYCLE_CITATION
Polychaete movement videos	Videos of polychaetes burrowing and swimming.	Burrowing polychaete mechanics	reference_paper
Polyphosphate in the Great Lakes	Polyphosphate in the Great Lakes (USA)	Great Lakes CNP cycles	Reference
Primary producer amino acid nitrogen isotope data meta-analysis	Published primary producer amino acid nitrogen isotope values to examine beta variability in trophic position estimates	GoME Copepod Coral Export	Citation, Full_Reference
Range_Taxonomy_LifeHistory	Database of marine invertebrate dispersal parameters and species ranges	CoastBenthBiogeo	references
Range_Taxonomy_LifeHistory_Location	Database of marine invertebrate dispersal parameters and species ranges	CoastBenthBiogeo	references
Reef Fish Genetic Accessions 2019	Hawaiian Reef Fish Genetic Accessions	Hawaiian Fish Origins	Journal_Publications, Journal_Publication_DOI
Rockfish microhaplotype sequences	Links to sequence files associated with this project	Larval Dispersal in Kelp Rockfish	publication
Rpalustris_SiderophoreConcentrations		Bacteria Iron Siderophores	FigRef
Sampling Locations	Keratoisis Sample Locations	Bamboo Coral Boron Isotopes	Original_Reference
Seawater data	Seawater	Climate_Coral_Larvae	Paper
sequence accession numbers	GenBank accession numbers for sequences from deep-sea protobranch bivalves.	Ev Deep Sea Molluscs II	reference
Shark respirometry: temperature corrections	Nurse shark acceleration and oxygen consumption in cold and warm water	Shark Metabolic Rate	study_reference
Summary data from the Heatwaves and Coral-Recovery Database (HeatCRD)	Summary data from the Heatwaves and Coral-Recovery Database (HeatCRD)	Coral Recovery	Citation
Symbiont accession numbers	Accession numbers of symbiotic algae in coral	SymBioSys	reference_paper
Thaps microarrays - ISB	Microarrays for T. pseudonana diatoms grown in the laboratory under different conditions.	OA Diatom Response	publication
Thermal growth rates	PFT Thermal Response - Thermal growth rates	Phytoplankton Community Responses	study
Total mercury concentrations and size data for bigeye tuna, yellowfin tuna, and longnose lancetfish from the North Pacific Ocean	Mercury concentrations fish 1971-2023	SCOHH	reference
Vharveyi_SiderophoreConcentrations		Bacteria Iron Siderophores	FigRef

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Parameter: reference_paper