Dataset: Mussel larvae mass spec analyses: spots and lines
Deployment: Herrmann_lab

Elemental analysis of mussel larvae bulk material

Principal Investigator:

Dr Achim D. Herrmann (Louisiana State University, LSU-CSI)

BCO-DMO Data Manager:

Nancy Copley (Woods Hole Oceanographic Institution, WHOI BCO-DMO)

Project:

Development of geochemical proxies to evaluate larval pH-exposure history (OA_Proxies)

Current State:

Preliminary and in progress

Version:

2015-07-14

Version Date:

2015-07-14

Data URL:

https://www.bco-dmo.org/dataset-deployment/562420/data

Expand/Collapse All

Description

Methods & Sampling

Dataset acquisition description

Not yet provided.

?? [The concentrations of isotopes in each mussel were analyzed using a laser ablation inductively coupled plasma mass spectrometer (LA-ICPMS; Cetac LSX-213; 213 nm laser coupled to an iCap Qc ICPMS) located in the Department of Geology and Geophysics at Louisiana State University. ...measured in the Secondary Ion Mass Spectrometry Labs at Arizona State University using a Cameca IMS 3F.??]

Data Processing Description

Dataset Processing Description

BCO-DMO Data Processing:

In order to serve on the BCO-DMO system, these changes were made to the originally submitted files:
- headers were split off from data
- separated each pair of meta/value into single record
- sorted files by time_start
- added columns for sample_type, date, run, sample, time_start, meta, and value

More information about this dataset deployment

Funding

Award Number	Funding Source
OCE-1401349	NSF Division of Ocean Sciences

Instruments

Inductively Coupled Plasma Mass Spectrometer

Supplied Name: ICP Mass Spec

Supplied Description:

LA-ICPMS; Cetac LSX-213; 213 nm laser coupled to an iCap Qc ICPMS located in the Department of Geology and Geophysics at Louisiana State University.

Instrument Type

Generic Name: Inductively Coupled Plasma Mass Spectrometer

Acronym: ICP Mass Spec

Community Identifier: http://vocab.nerc.ac.uk/collection/L05/current/LAB15/

Generic Description:

An ICP Mass Spec is an instrument that passes nebulized samples into an inductively-coupled gas plasma (8-10000 K) where they are atomized and ionized. Ions of specific mass-to-charge ratios are quantified in a quadrupole mass spectrometer.

Mass Spectrometer

Supplied Name: Mass Spec

Supplied Description:

Cameca IMS 3F located at the Secondary Ion Mass Spectrometry Labs at Arizona State University

Instrument Type

Generic Name: Mass Spectrometer

Acronym: Mass Spec

Community Identifier: http://vocab.nerc.ac.uk/collection/L05/current/LAB16/

Generic Description:

General term for instruments used to measure the mass-to-charge ratio of ions; generally used to find the composition of a sample by generating a mass spectrum representing the masses of sample components.

Parameters

Supplied Name	Supplied description	Supplied Units	Standard Name
date	date of analysis	yyyy-mm-dd	date
sample_type	type of sample: line or spot	text	sample_type
run	mass spec run id	unitless	sample
sample	sample identification	unitless	sample
time_start	time at start of mass spec run	HH:MM:SS	time_start
time	acquisition duration	seconds	time_elapsed
Li7	concentration of 7Li in mussel larvae	atomic mass units (AMU)	trace_metal_conc
B11	concentration of 11B in mussel larvae	atomic mass units (AMU)	trace_metal_conc
Na23	concentration of 23Na in mussel larvae	atomic mass units (AMU)	trace_metal_conc
Mg24	concentration of 24Mg in mussel larvae	atomic mass units (AMU)	trace_metal_conc
Mg25	concentration of 25Mg in mussel larvae	atomic mass units (AMU)	trace_metal_conc
Mg26	concentration of 26Mg in mussel larvae	atomic mass units (AMU)	trace_metal_conc
Al27	concentration of 27Al in mussel larvae	atomic mass units (AMU)	trace_metal_conc
P31	concentration of 31P in mussel larvae	atomic mass units (AMU)	trace_metal_conc
K39	concentration of 39K in mussel larvae	atomic mass units (AMU)	trace_metal_conc
Ca42	concentration of 42Ca in mussel larvae	atomic mass units (AMU)	trace_metal_conc
Ca43	concentration of 43Ca in mussel larvae	atomic mass units (AMU)	trace_metal_conc
Ca44	concentration of 44Ca in mussel larvae	atomic mass units (AMU)	trace_metal_conc
V51	concentration of 51V in mussel larvae	atomic mass units (AMU)	trace_metal_conc
Cr53	concentration of 53Cr in mussel larvae	atomic mass units (AMU)	trace_metal_conc
Mn55	concentration of 55Mn in mussel larvae	atomic mass units (AMU)	trace_metal_conc
Co59	concentration of 59Co in mussel larvae	atomic mass units (AMU)	trace_metal_conc
Ni60	concentration of 60Ni in mussel larvae	atomic mass units (AMU)	trace_metal_conc
Cu65	concentration of 65Cu in mussel larvae	atomic mass units (AMU)	trace_metal_conc
Sr86	concentration of 86Sr in mussel larvae	atomic mass units (AMU)	trace_metal_conc
Sr88	concentration of 88Sr in mussel larvae	atomic mass units (AMU)	trace_metal_conc
Y89	concentration of 89Y in mussel larvae	atomic mass units (AMU)	trace_metal_conc
Ba138	concentration of 138Ba in mussel larvae	atomic mass units (AMU)	trace_metal_conc
La139	concentration of 139La in mussel larvae	atomic mass units (AMU)	trace_metal_conc
Ce140	concentration of 140Ce in mussel larvae	atomic mass units (AMU)	trace_metal_conc
Pb208	concentration of 208Pb in mussel larvae	atomic mass units (AMU)	trace_metal_conc
Th232	concentration of 232Th in mussel larvae	atomic mass units (AMU)	trace_metal_conc
U238	concentration of 238U in mussel larvae	atomic mass units (AMU)	trace_metal_conc

Database

Contribute Data

Dataset: Mussel larvae mass spec analyses: spots and lines
Deployment: Herrmann_lab

Dataset acquisition description

Dataset Processing Description

Database

Contribute Data

Dataset: Mussel larvae mass spec analyses: spots and linesDeployment: Herrmann_lab

Dataset acquisition description

Dataset Processing Description

Dataset: Mussel larvae mass spec analyses: spots and lines
Deployment: Herrmann_lab