Dataset: Experiments evaluating protein size distribution pattern in EPS Si+ and EPS Si2 using sodium dodecyl sulfate–polyacrylamide gel electrophoresis

Final no updates expectedDOI: 10.1575/1912/bco-dmo.764688.1Version 1 (2019-04-10)Dataset Type:experimental

Principal Investigator: Peter Santschi (Texas A&M, Galveston)

Co-Principal Investigator: Antonietta Quigg (Texas A&M, Galveston)

Co-Principal Investigator: Kathleen Schwehr (Texas A&M, Galveston)

Co-Principal Investigator: Chen Xu (Texas A&M, Galveston)

BCO-DMO Data Manager: Mathew Biddle (Woods Hole Oceanographic Institution)


Project: Biopolymers as carrier phases for selected natural radionuclides (of Th, Pa, Pb, Po, Be) in diatoms and coccolithophores (Biopolymers for radionuclides)


Abstract

Laboratory studies were conducted to examine the sorption of selected radionuclides (234Th, 233Pa, 210Po, 210Pb, and 7Be) onto inorganic (pure silica and acid-cleaned diatom frustules) and organic (diatom cells with or without silica frustules) particles in natural seawater and the role of templating biomolecules and exopolymeric substances (EPS) extracted from the same species of diatom, Phaeodactylum tricornutum, in the sorption process. The range of partition coefficients (Kd, reported as log...

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Laboratory studies were conducted to examine the sorption of selected radionuclides (234Th, 233Pa, 210Po,
210Pb, and 7Be) onto inorganic (pure silica and acid-cleaned diatom frustules) and organic (diatom cells with or
without silica frustules) particles in natural seawater and the role of templating biomolecules and exopolymeric
substances (EPS) extracted from the same species of diatom, Phaeodactylum tricornutum, in the sorption process.
The range of partition coefficients (Kd, reported as logKd) of radionuclides between water and the different
particle types was 4.78–6.69 for 234Th, 5.23–6.71 for 233Pa, 4.44–5.86 for 210Pb, 4.47–4.92 for 210Po, and 4.93–7.23 for 7Be, similar to values reported for lab and field determinations. The sorption of all radionuclides was
significantly enhanced in the presence of organic matter associated with particles, resulting in Kd one to two
orders of magnitude higher than for inorganic particles only, with highest values for 7Be (logKd of 7.2). Results
further indicate that EPS and frustule-embedded biomolecules in diatom cells are responsible for the sorption
enhancement rather than the silica shell itself. By separating radiolabeled EPS via isoelectric focusing, we found
that isoelectric points are radionuclide specific, suggesting that each radionuclide binds to specific biopolymeric
functional groups, with the most efficient binding sites likely occurring in acid polysaccharides, iron hydroxides,
and proteins. Further progress in evaluating the effects of diatom frustule–related biopolymers on binding,
scavenging, and fractionation of radionuclides would require the application of molecular-level characterization
techniques.


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Results

Chuang, C.-Y., Santschi, P. H., Jiang, Y., Ho, Y.-F., Quigg, A., Guo, L., … Schumann, D. (2014). Important role of biomolecules from diatoms in the scavenging of particle-reactive radionuclides of thorium, protactinium, lead, polonium, and beryllium in the ocean: A case study withPhaeodactylum tricornutum. Limnology and Oceanography, 59(4), 1256–1266. doi:10.4319/lo.2014.59.4.1256
Methods

Alvarado Quiroz, N. G., Hung, C.-C., & Santschi, P. H. (2006). Binding of thorium(IV) to carboxylate, phosphate and sulfate functional groups from marine exopolymeric substances (EPS). Marine Chemistry, 100(3-4), 337–353. doi:10.1016/j.marchem.2005.10.023
Methods

Baskaran, M., & Santschi, P. H. (1993). The role of particles and colloids in the transport of radionuclides in coastal environments of Texas. Marine Chemistry, 43(1-4), 95–114. doi:10.1016/0304-4203(93)90218-d
Methods

Chuang, C.-Y., Santschi, P. H., Ho, Y.-F., Conte, M. H., Guo, L., Schumann, D., … Li, Y.-H. (2013). Role of biopolymers as major carrier phases of Th, Pa, Pb, Po, and Be radionuclides in settling particles from the Atlantic Ocean. Marine Chemistry, 157, 131–143. doi:10.1016/j.marchem.2013.10.002
Methods

Duan, S., & Bianchi, T. S. (2007). Particulate and dissolved amino acids in the lower Mississippi and Pearl Rivers (USA). Marine Chemistry, 107(2), 214–229. doi:10.1016/j.marchem.2007.07.003