Project: CAREER: Linking genetic diversity, population density, and disease prevalence in seagrass and oyster ecosystems

Acronym/Short Name:Seagrass and Oyster Ecosystems
Project Duration:2017-02 -2022-01
Geolocation:Coastal New England

Description

NSF Award Abstract:
Disease outbreaks in the ocean are increasing, causing losses of ecologically important marine species, but the factors contributing to these outbreaks are not well understood. This 5-year CAREER project will study disease prevalence and intensity in two marine foundation species - the seagrass Zostera marina and the Eastern oyster Crassostrea virginica. More specifically, host-disease relationships will be explored to understand how genetic diversity and population density of the host species impacts disease transmission and risk. This work will pair large-scale experimental restorations and smaller-scale field experiments to examine disease-host relationships across multiple spatial scales. Comparisons of patterns and mechanisms across the two coastal systems will provide an important first step towards identifying generalities in the diversity-density-disease relationship. To enhance the broader impacts and utility of this work, the experiments will be conducted in collaboration with restoration practitioners and guided by knowledge ascertained from key stakeholder groups. The project will support the development of an early career female researcher and multiple graduate and undergraduate students. Students will be trained in state-of-the-art molecular techniques to quantify oyster and seagrass parasites. Key findings from the surveys and experimental work will be incorporated into undergraduate courses focused on Conservation Biology, Marine Biology, and Disease Ecology. Finally, students in these courses will help develop social-ecological surveys and mutual learning games to stimulate knowledge transfer with stakeholders through a series of workshops.

The relationship between host genetic diversity and disease dynamics is complex. In some cases, known as a dilution effect, diversity reduces disease transmission and risk. However, the opposite relationship, known as the amplification effect, can also occur when diversity increases the risk of infection. Even if diversity directly reduces disease risk, simultaneous positive effects of diversity on host density could lead to amplification by increasing disease transmission between infected and uninfected individuals. Large-scale field restorations of seagrasses (Zostera marina) and oysters (Crassostrea virginica) will be utilized to test the effects of host genetic diversity on host population density and disease prevalence/intensity. Additional field experiments independently manipulating host genetic diversity and density will examine the mechanisms leading to dilution or amplification. Conducting similar manipulations in two marine foundation species - one a clonal plant and the other a non-clonal animal - will help identify commonalities in the diversity-density-disease relationship. Further, collaborations among project scientists, students, and stakeholders will enhance interdisciplinary training and help facilitate the exchange of information to improve management and restoration efforts. As part of these efforts, targeted surveys will be used to document the perceptions and attitudes of managers and restoration practitioners regarding genetic diversity and its role in ecological resilience and restoration.


DatasetLatest Version DateCurrent State
The implications of functional trait variation from fish sampled in Rhode Island salt ponds from June to October 20182025-02-16Final no updates expected
Prevalence and intensity of oyster parasite species following a reef restoration experiment in Quonochontaug Pond, Rhode Island, USA from 2017-20202022-11-10Final no updates expected
Faunal ID, size and biomass on oyster reefs in Quonochontaug Pond, RI from July-August 2018 and September-October 20182022-11-02Final no updates expected
Oyster density of restored reef edge/interior in Quonochontaug Pond, RI in May 20192022-11-02Final no updates expected
Daily temperature measurements on restored oyster reefs in Quonochontaug Pond, RI from July-August 2018 and September-October 20182022-11-01Final no updates expected
Quantitative PCR cell count estimates from samples of DNA extracted from seagrass wasting disease parasite, Labyrinthula zosterae from wasting disease mesocosm experiments at Bodega Marine Laboratory in July-Sept of 20152022-10-27Final no updates expected
Microbial taxa (amplicon sequence variant or ASV) statistical analyses for two seagrass genotypes from wasting disease mesocosm experiments at Bodega Marine Laboratory in July-Sept of 20152022-10-27Final no updates expected
Temperature from seagrass wasting disease mesocosm experiments at Bodega Marine Laboratory in June-July 20152022-10-27Final no updates expected
Seagrass metrics from from seagrass wasting disease mesocosm experiments conducted at Bodega Marine Laboratory from July-September 20152022-10-06Final no updates expected
Wasting disease prevalence and severity and seagrass length and density based on subpopulations of Zostera marina on the North Shore of Massachusetts surveyed in July and September 20162021-05-04Final no updates expected
Seagrass responses to Labyrinthula zosterae inoculation base on a subpopulation from mesocosm experiments conducted in Nahant, Massachusetts2021-05-04Final no updates expected
Seawater temperature and salinity of mesocosms and a field location collected while conducting experiments on seagrass in Nahant, Massachusetts2021-05-04Final no updates expected
Database summarizing independent studies of nekton taxa associated with oyster reefs2021-03-23Final no updates expected
Coastal habitat restoration survey2020-11-20Final no updates expected
An archive of the fish and inveterate data from the Rhode Island Department of Environmental Management (RIDEM) juvenile fin-fish survey across 6 Rhode Island salt ponds from 2010-20152020-03-03Final no updates expected
Database of oyster mortality based on body size treatment2020-03-02Final no updates expected
Performance traits (e.g., survival, growth, size) for hatchery-produced oyster cohorts2019-06-07Final no updates expected
DNA microsatellite alleles for hatchery-produced oyster cohorts2019-06-06Final no updates expected
Database of published habitat restoration studies from 1995, 2005, and 20152018-09-04Final no updates expected

People

Principal Investigator: A. Randall Hughes
Northeastern University

Contact: A. Randall Hughes
Northeastern University


Data Management Plan

DMP_Hughes_OCE-1652320.pdf (268.22 KB)
02/09/2025