Dataset: bottle
Deployment: KN207-03

Niskin bottle data from cruise KN207-03 (NA-VICE).

Principal Investigator:

Kay D. Bidle (Rutgers University, Rutgers IMCS)

Giacomo DiTullio (College of Charleston, CofC)

Benjamin A.S. Van Mooy (Woods Hole Oceanographic Institution, WHOI)

Co-Principal Investigator:

Marco Coolen (Woods Hole Oceanographic Institution, WHOI)

Assaf Vardi (Weizmann Institute of Science)

BCO-DMO Data Manager:

Shannon Rauch (Woods Hole Oceanographic Institution, WHOI BCO-DMO)

Project:

Lipid lubrication of oceanic carbon and sulfur biogeochemistry via a host-virus chemical arms race (NA-VICE)

Current State:

Final no updates expected

Version:

28 March 2013

Deployment Synonyms:

NA-VICE

Version Date:

2013-03-28

Data URL:

https://www.bco-dmo.org/dataset-deployment/455886/data

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Description

Niskin bottle data from CTD casts from the KN207-03 cruise. The raw bottle data was processed using Seasave software version 7.21e (QA/QC has not been performed).

Methods & Sampling

Dataset acquisition description

Header information from Sea-Bird SBE 9 Bottle (.btl) Data file:
Software Version Seasave V 7.21e
Temperature SN = 4406; Conductivity SN = 1474
Number of Bytes Per Scan = 44; Number of Voltage Words = 5
Number of Scans Averaged by the Deck Unit = 1

Sensor Channel 1: Frequency 0, Temperature; SensorID = 55; Serial Number = 4406
Calibration Date: 14-Feb-12
Use G_J: 1
A: 0.00000000e+000; B: 0.00000000e+000; C: 0.00000000e+000; D: 0.00000000e+000; F0_Old: 0.000
G: 4.33630903e-003; H: 6.36463726e-004; I: 2.06290680e-005; J: 1.71729728e-006
F0: 1000.000
Slope: 1.00000000; Offset: 0.0000

Sensor Channel 2: Frequency 1, Conductivity; Sensor ID = 3; Serial Number = 1474
Calibration Date: 14-Feb-12
Use G_J: 1; Cell const and series R are applicable only for wide range sensors.
Series R: 0.0000; CellConst: 2000.0000; Conductivity Type: 0
Coefficients equation = 0
A: 0.00000000e+000; B: 0.00000000e+000; C: 0.00000000e+000; D: 0.00000000e+000; M: 0.0
CPcor: -9.57000000e-008
Coefficients equation = 1
G: -4.21351634e+000; H: 5.39243337e-001; I: -2.08827162e-004; J: 3.95099976e-005
CPcor: -9.57000000e-008; CTcor: 3.2500e-006
WBOTC not applicable unless ConductivityType = 1.
WBOTC: 0.00000000e+000
Slope: 1.00000000; Offset: 0.00000

Sensor Channel 3: Frequency 2, Pressure; Digiquartz with TC; Sensor ID = 45; Serial Number: 69685 in 090484 vertical orientation
Calibration Date: 12/18/2002
C1: -4.680530e+004; C2: -8.320595e-001; C3: 1.450810e-002
D1: 3.903100e-002; D2: 0.000000e+000
T1: 3.038361e+001; T2: -5.411459e-004; T3: 4.085080e-006; T4: 2.564540e-009
Slope: 0.99995000; Offset: 0.00000
T5: 0.000000e+000
AD590M: 1.280820e-002; AD590B: -9.210198e+000

Sensor Channel 4: Frequency 3, Temperature, 2; Sensor ID = 55; Serial Number: 2271
Calibration Date: 14-Feb-12
Use G_J: 1
A: 0.00000000e+000; B: 0.00000000e+000; C: 0.00000000e+000; D: 0.00000000e+000; F0_Old: 0.000
G: 4.33365550e-003; H: 6.41046238e-004; I: 2.31654312e-005; J: 2.15092946e-006
F0: 1000.000
Slope: 1.00000000; Offset: 0.0000

Sensor Channel 5: Frequency 4, Conductivity, 2; Sensor ID = 3; Serial Number: 2707
Calibration Date: 14-Feb-12
Use G_J: 1
Cell const and series R are applicable only for wide range sensors.
Series R: 0.0000
CellConst: 2000.0000
Conductivity Type: 0
Coefficients equation = 0
A: 0.00000000e+000; B: 0.00000000e+000; C: 0.00000000e+000; D: 0.00000000e+000; M: 0.0
CPcor: -9.57000000e-008
Coefficients equation = 1
G: -1.07258216e+001; H: 1.55968861e+000; I: -1.50749109e-003; J: 2.09512327e-004
CPcor: -9.57000000e-008; CTcor: 3.2500e-006
WBOTC not applicable unless ConductivityType = 1.
WBOTC: 0.00000000e+000
Slope: 1.00000000; Offset: 0.00000

Sensor Channel 6: A/D voltage 0, Fluorometer, WET Labs ECO-AFL/FL; Sensor ID = 20; Serial Number = FLNTURTD-1013
Calibration Date: april 18, 2008
ScaleFactor: 6.00000000e+000
Vblank: 0.0800

Sensor Channel 7: A/D voltage 1, User Polynomial; Sensor ID = 61; Serial Number = FLNTURTD-1013
Calibration Date: april 18, 2008
SensorName: turbidity
A0: 0.15800000; A1: 2.00000000; A2: 0.00000000; A3: 0.00000000

Sensor Channel 8: A/D voltage 2, PAR/Irradiance, Biospherical/Licor; Sensor ID = 42; Serial Number = 4550
Calibration Date: 13-Mar-2008
M: 1.00000000; B: 0.00000000
Calibration Constant: 77519400000.00000000
Multiplier: 1.00000000; Offset: -0.01906000

Sensor Channel 9: A/D voltage 3, Transmissometer, Chelsea/Seatech/WET Lab CStar; Sensor ID = 59; Serial Number = CST-1117DR
Calibration Date: 05-Aug-2011
M: 21.0530; B: -0.1537
PathLength: 0.250

Sensor Channel 10: A/D voltage 4, Altimeter; Sensor ID = 0; Serial Number: 1133
Calibration Date:
ScaleFactor: 14.950; Offset: 0.200

Sensor Channel 11: A/D voltage 5, Oxygen, SBE 43; Sensor ID = 38; Serial Number: 0723
Calibration Date: 11-Feb-12
Use2007Equation: 1
CalibrationCoefficients equation = 0
Coefficients for Owens-Millard equation.
Boc: 0.0000; Soc: 0.0000e+000; Offset: 0.0000
Pcor: 0.00e+000; Tcor: 0.0000; Tau: 0.0
CalibrationCoefficients equation = 1
Coefficients for Sea-Bird equation - SBE calibration in 2007 and later.
Soc: 5.5281e-001; Offset: -0.5125
A: -2.4781e-003; B: 9.2148e-005; C: -1.8426e-006
D0: 2.5826e+000; D1: 1.92634e-004; D2: -4.64803e-002; E: 3.6000e-002
Tau20: 1.3300
H1: -3.3000e-002; H2: 5.0000e+003; H3: 1.4500e+003

Sensor Channel 12: A/D voltage 6, User Polynomial, 2; Sensor ID = 61; Serial Number = SUNA
Calibration Date: N/A
Sensor Name: SUNA Nitrate
A0: -3.73832000; A1: 10.68091000; A2: 0.00000000; A3: 0.00000000

Sensor Channel 13: A/D voltage 7, Free

Sensor Channel 14: SPAR voltage, Unavailable

Sensor Channel 15: SPAR voltage, SPAR/Surface Irradiance; Sensor ID = 51; Serial Number: 6294
Calibration Date: 2008-03-13
Conversion Factor: 1826.90000000; Ratio Multiplier: 1.00000000

datcnv_ox_hysteresis_correction = yes
datcnv_ox_tau_correction = no
datcnv_bottle_scan_range_source = scans marked with bottle confirm bit, 0, 5
bottlesum_ox_tau_correction = yes

Data Processing Description

Dataset Processing Description

Raw data was processed using Seasave software version 7.21e. BCO-DMO retrieved the processed data from the WHOI Data Library & Archives and made the following edits to the bottle (.btl) files:
- Changed parameter names to conform to BCO-DMO conventions.
- Converted latitude and longitude from degrees and decimal minutes to decimal degrees.
- Added cast, date_gmt, time_start, lat_start, lon_start from the CTD file headers.
- Added ISO_DateTime_UTC using the original date and time fields.
- Bottle file '20703015' (bottle data from cast 15),contained only invalid/undecipherable values. Possible instrument or processing failure, or data file corruption. BCO-DMO replaced these characters with 'nd' to indicate 'no data'.

More information about this dataset deployment

Funding

Award Number	Funding Source
OCE-1061883	NSF Division of Ocean Sciences

Instruments

Niskin bottle

Supplied Description:

Instrument Type

Generic Name: Niskin bottle

Community Identifier: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0412/

Generic Description:

A Niskin bottle (a next generation water sampler based on the Nansen bottle) is a cylindrical, non-metallic water collection device with stoppers at both ends. The bottles can be attached individually on a hydrowire or deployed in 12, 24, or 36 bottle Rosette systems mounted on a frame and combined with a CTD. Niskin bottles are used to collect discrete water samples for a range of measurements including pigments, nutrients, plankton, etc.

Parameters

Supplied Name	Supplied description	Supplied Units	Standard Name
cast	CTD cast number.	dimensionless	cast
date_gmt	Date (GMT) at the start of the CTD cast in YYYYmmdd format.	dimensionless	date_begin
time_start	Time (GMT) at start of the CTD cast in HHMM format (seconds have been rounded to the nearest minute).	dimensionless	time_start
lat_start	Latitude in decimal degrees at start of CTD cast; negative = South.	decimal degrees	lat_start
lon_start	Longitude in decimal degrees at start of CTD cast; negative = West.	decimal degrees	lon_start
bottle	Niskin bottle number. Originally named 'Bottle Position'.	unitless	bottle
time_gmt	Time (GMT) the bottle was fired. In hours, minutes, and decimal minutes; 24-hour clock.	HHMM.mm	time_gmt
press_avg	Average pressure. Column originally named 'PrDM'.	decibars	press
press_sd	Standard deviation of press_avg.	decibars	no_bcodmo_term
press_min	Minimum pressure.	decibars	press
press_max	Maximum pressure.	decibars	press
depth_avg	Average depth. Column originally named 'DepSM'.	meters	depth
depth_sd	Standard deviation of depth_avg.	meters	no_bcodmo_term
depth_min	Minimum depth.	meters	depth_min
depth_max	Maximum depth.	meters	depth_max
potemp	Potential temperature from primary sensor. Originally named 'Potemp090C'.	degrees C	potemp
potemp2	Potential temperature from secondary sensor. Originally named 'Potemp190C'.	degrees C	potemp2
sal	Salinity from the primary sensor. Originally named 'Sal00'.	PSU	sal
sal2	Salinity from the secondary sensor. Originally named 'Sal11'.	PSU	sal2
O2	Oxygen in milliliters per liter measured by the SBE 43. Originally named 'Sbeox0ML/L'.	mL/L	O2
O2_sat_pcnt	Percent oxygen saturation. Originally named 'Sbeox0PS'.	%	O2_sat_pcnt
sigma_0	Density, sigma-theta, in kilograms per cubic meter from primary sensor. Originally named 'Sigma_e00'.	kg/m^3	sigma_0
sigma_0_2	Density, sigma-theta, in kilograms per cubic meter from secondary sensor. Originally named 'Sigma-e11'.	kg/m^3	sigma_0
sigma_t	Sigma-t density from primary sensor. Originally named 'Sigma-t00'.	kg/m^3	sigma_t
sigma_t_2	Sigma-t density from secondary sensor. Originally named 'Sigma-t11'.	kg/m^3	sigma_t
temp_avg	Average temperature from primary sensor. Column originally named 'T090C'.	degrees C	temp
temp_sd	Standard deviation of temp_avg.	degrees C	no_bcodmo_term
temp_min	Minimum temperature from primary sensor.	degrees C	temp
temp_max	Maximum temperature from primary sensor.	degrees C	temp
temp2_avg	Average temperature from secondary sensor. Column originally named 'T190C'.	degrees C	temp2
temp2_sd	Standard deviation of temp2_avg.	degrees C	no_bcodmo_term
temp2_min	Minimum temperature from secondary sensor.	degrees C	temp2
temp2_max	Maximum temperature from secondary sensor.	degrees C	temp2
cond_avg	Average conductivity in Siemens per meter from primary sensor. Column originally named 'C0S/m'.	S/m	cond
cond_sd	Standard deviation of cond_avg.	S/m	no_bcodmo_term
cond_min	Minimum conductivity from primary sensor.	S/m	cond
cond_max	Maximum conductivity from primary sensor.	S/m	cond
cond2_avg	Average conductivity in Siemens per meter from secondary sensor. Column originally named 'C1S/m'.	S/m	cond2
cond2_sd	Standard deviation of cond2_avg.	S/m	no_bcodmo_term
cond2_min	Minimum conductivity from secondary sensor.	S/m	cond2
cond2_max	Maximum conductivity from secondary sensor.	S/m	cond2
O2_v_avg	Average raw oxygen reading from the SBE 43. Column originally named 'Sbeox0V'.	volts	O2_v
O2_v_sd	Standard deviation of O2_v_avg.	volts	no_bcodmo_term
O2_v_min	Minimum raw oxygen reading from the SBE 43.	volts	O2_v
O2_v_max	Maximum raw oxygen reading from the SBE 43.	O2_v_max	O2_v
trans_avg	Average beam transmission from Chelsea/Seatech/WET Labs CStar. Column originally named 'Xmiss'.	%	trans
trans_sd	Standard deviation of trans_avg.	%	no_bcodmo_term
trans_min	Minimum beam transmission from Chelsea/Seatech/WET Labs CStar.	%	trans
trans_max	Maximum beam transmission from Chelsea/Seatech/WET Labs CStar.	%	trans
beam_c_avg	Average beam attenuation from Chelsea/Seatech/WET Labs CStar (in inverse meters). Column originally named 'Bat'.	1/m	beam_c
beam_c_sd	Standard deviation of beam_c_avg.	1/m	no_bcodmo_term
beam_c_min	Minimum beam attenuation from Chelsea/Seatech/WET Labs CStar (in inverse meters).	1/m	beam_c
beam_c_max	Maximum beam attenuation from Chelsea/Seatech/WET Labs CStar (in inverse meters).	1/m	beam_c
fluor_avg	Average fluorescence from WET Labs ECO-AFL/FL in milligrams per cubic meter. Column originally named 'FlECO-AFL'.	mg/m^3	fluor
fluor_sd	Standard deviation of fluor_avg.	mg/m^3	no_bcodmo_term
fluor_min	Minimum fluorescence from WET Labs ECO-AFL/FL in milligrams per cubic meter.	mg/m^3	fluor
fluor_max	Maximum fluorescence from WET Labs ECO-AFL/FL in milligrams per cubic meter.	mg/m^3	fluor
turbidity_avg	Average turbidity. Column originally named 'Upoly0'.	NTU	turbidity
turbidity_sd	Standard deviation of turbidity_avg.	NTU	no_bcodmo_term
turbidity_min	Minimum turbidity.	NTU	turbidity
turbidity_max	Maximum turbidity.	NTU	turbidity
scan_avg	Average scan number.	unitless	scan
scan_sd	Standard deviation of scan_avg.	unitless	no_bcodmo_term
scan_min	Minimum scan number.	unitless	scan
scan_max	Maximum scan number.	unitless	scan
ISO_DateTime_UTC	Date/Time (UTC) formatted to ISO 8601 standard. T indicates start of time string; Z indicates UTC.	YYYY-mm-ddTHH:MM:SS.ssZ	ISO_DateTime_UTC

Database

Contribute Data

Dataset: bottle
Deployment: KN207-03

Dataset acquisition description

Dataset Processing Description

Database

Contribute Data

Dataset: bottleDeployment: KN207-03

Dataset acquisition description

Dataset Processing Description

Dataset: bottle
Deployment: KN207-03