Dataset: Scanning Transmission X-Ray Microscopy raw images and spectra for aXis 2000 analysis software packages from the Maria S. Merian from 2012-2014 (North Pond Microbes project)

This dataset has not been validatedPreliminary and in progressVersion 2015-09-02 (2015-09-02)Dataset Type:Cruise Results

Principal Investigator: Brian Glazer (University of Hawaiʻi at Mānoa)

Co-Principal Investigator: Peter Girguis (Harvard University)

Co-Principal Investigator: Julie Huber (Marine Biological Laboratory)

Co-Principal Investigator: Brandy Marie Toner (University of Minnesota Twin Cities)

BCO-DMO Data Manager: Nancy Copley (Woods Hole Oceanographic Institution)

Program: Center for Dark Energy Biosphere Investigations (C-DEBI)

Program: International Ocean Discovery Program (IODP)

Project: Collaborative Research: Characterization of Microbial Transformations in Basement Fluids, from Genes to Geochemical Cycling (North Pond Microbes)

Abstract

This dataset includes Scanning Transmission X-Ray Microscopy raw images and spectra for aXis 2000 analysis software packages. Samples from the North Pond CORK Observatories were filtered during RV/Maria S. Merian cruises MSM20-5 and MSM37 during 2012 and 2014 expeditions. Contact PI for lab notebook notes to describe images and spectra. Archive files are grouped by date of trips to Berkeley’s Advanced Light Source: 2013_01, 2013_10, 2014_09. They are in .zip compressed files.

Cite Dataset

Download data files:
2013_01 - http://dmoserv3.bco-dmo.org/data/glazer/North_Pond_Microbes/STXM/ALS_STXM_2013_01.zip
2013_10 - http://dmoserv3.bco-dmo.org/data/glazer/North_Pond_Microbes/STXM/ALS_STXM_2013_10.zip
2014_09 - http://dmoserv3.bco-dmo.org/data/glazer/North_Pond_Microbes/STXM/ALS_STXM_2014_09.zip

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Related Publications

Results
Wheat, C. G., Becker, K., Villinger, H., Orcutt, B. N., Fournier, T., Hartwell, A., & Paul, C. (2020). Subseafloor Cross‐Hole Tracer Experiment Reveals Hydrologic Properties, Heterogeneities, and Reactions in Slow‐Spreading Oceanic Crust. Geochemistry, Geophysics, Geosystems, 21(1). doi:10.1029/2019gc008804
Methods
Cowen, J. P., Copson, D. A., Jolly, J., Hsieh, C.-C., Lin, H.-T., Glazer, B. T., & Wheat, C. G. (2012). Advanced instrument system for real-time and time-series microbial geochemical sampling of the deep (basaltic) crustal biosphere. Deep Sea Research Part I: Oceanographic Research Papers, 61, 43–56. doi:10.1016/j.dsr.2011.11.004

Glazer, B., Huber, J., Girguis, P., Toner, B. M. (2015) Scanning Transmission X-Ray Microscopy raw images and spectra for aXis 2000 analysis software packages from the Maria S. Merian from 2012-2014 (North Pond Microbes project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 2015-09-02) Version Date 2015-09-02 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/565388 [access date]

Terms of Use

This dataset is licensed under Creative Commons Attribution 4.0.


If you wish to use this dataset, it is highly recommended that you contact the original principal investigators (PI). Should the relevant PI be unavailable, please contact BCO-DMO (info@bco-dmo.org) for additional guidance. For general guidance please see the BCO-DMO Terms of Use document.

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Funded by the U.S. National Science Foundation