Julie Huber

Affiliation:

Woods Hole Oceanographic Institution (WHOI)

Address:

Woods Hole Oceanographic Institution
Marine Chemistry & Geochemistry, Watson Building, MS51
Woods Hole, MA
USA 02543

ORCiD:

Activities reported for Julie Huber:

Program coordination

Center for Dark Energy Biosphere Investigations ([C-DEBI])	Co-Principal Investigator
Crustal Ocean Biosphere Research Accelerator ([COBRA])	Co-Principal Investigator

Project coordination

Function, activity, and adaptation of microbial communities in geochemically diverse subseafloor habitats (AXIAL)	Principal Investigator
Collaborative Research: Characterization of Microbial Transformations in Basement Fluids, from Genes to Geochemical Cycling (North Pond Microbes)	Lead Principal Investigator, Contact
Functional gene diversity and expression in ocean crust microbial communities (NP Functional Gene Div)	Co-Principal Investigator
Modeling how virus-microbe interactions influence carbon flow at a deep-sea volcano (MMI Axial Seamount Subseafloor Life)	Lead Principal Investigator, Contact
Collaborative Research: A multidimensional approach to understanding microbial carbon cycling beneath the seafloor during cool hydrothermal circulation (Subseafloor Microbial Carbon Cycling)	Lead Principal Investigator, Contact
Characterizing and quantifying the impact of phagotrophic protists at hot spots of primary production at Axial Seamount (PROT-ATAX)	Lead Principal Investigator, Contact
Probing subseafloor microbial interactions via hydrothermal vent fluids: A focus on protists (Microbial eukaryotes at hydrothermal vents)	Co-Principal Investigator
Collaborative Research: Rapid Response to a Submarine Eruption at W. Mata Volcano (West Mata Volcano)	Principal Investigator, Contact
Collaborative Research: Microbes need frenemies: unveiling microbial relationships with protists and viruses that support deep-sea hydrothermal vent food webs (frenemies)	Co-Principal Investigator
Octopus Odyssey (OctoOdyssey)	Co-Principal Investigator

Deployment coordination

Deployment	Synonyms	Platform	Role
FK010		Falkor	Chief Scientist
TN405		Thomas G. Thompson	Chief Scientist

Datasets

Project: Collaborative Research: Microbes need frenemies: unveiling microbial relationships with protists and viruses that support deep-sea hydrothermal vent food webs

Dataset	Version Date	Current State
Metagenome and metatranscriptome sequences from deep-sea hydrothermal vent microbial communities collected on cruises AT42-22, TN405, and NA108 from May 2019 to Jun 2022 Co-Principal Investigator	2024-10-10	Preliminary and in progress

Project: Collaborative Research: Rapid Response to a Submarine Eruption at W. Mata Volcano

Dataset	Version Date	Current State
DOC, POC, d13C-POC, PN from a diffuse vent in West Mata sampled in May 2009 using ROV Jason II deployed from R/V Thomas Thompson. Co-Principal Investigator	2021-03-09	Final no updates expected

Project: Probing subseafloor microbial interactions via hydrothermal vent fluids: A focus on protists

Dataset	Version Date	Current State
18S rRNA amplicon sequencing of microbial eukaryotes from the Mid-Cayman Rise acquired Jan-Feb, 2020 Principal Investigator	2023-11-06	Final with updates expected
High throughput tag-sequencing data from Gorda Ridge Hydrothermal vent field, including 16S and 18S rRNA gene sequences, and environmental metadata from Gorda Ridge Seamount, May/June 2019 Co-Principal Investigator	2020-11-09	Final no updates expected
High throughput tag-sequencing accessions (18S rRNA gene region) and environmental metadata from Axial Seamount, 2013-2015 Co-Principal Investigator	2020-11-05	Final no updates expected

Project: Functional gene diversity and expression in ocean crust microbial communities

Dataset	Version Date	Current State
Whole genome sequence data from bacterial isolates from venting fluids at NW Rota Seamount, collected on R/V Thomas G. Thompson and R/V Kilo Moana cruises TN232 and KM1005 in the Mariana arc of the western Pacific in 2009 and 2010 Principal Investigator	2016-01-18	Final no updates expected

Project: Collaborative Research: Characterization of Microbial Transformations in Basement Fluids, from Genes to Geochemical Cycling

Dataset	Version Date	Current State
Reconstructed genomes from North Pond, western flank of the Mid-Atlantic Ridge, from 2012-2014 Principal Investigator	2019-12-02	Final no updates expected
Chemistry and cell counts of formation fluids from North Pond, western flank of the Mid-Atlantic Ridge, from 2012-2014 Principal Investigator	2019-12-02	Final no updates expected
The acetate and inorganic carbon uptake rates as determined via stable isotopic tracers from Maria S. Merian cruise MSM20-5 in 2012; data generated using the formation fluids recovered from CORKs installed at North Pond Co-Principal Investigator	2016-02-03	Final no updates expected
Dissolved organic carbon and total dissolved nitrogen from the formation fluids recovered from the CORKs installed at the North Pond; collected on Maria S. Merian cruise MSM20-5 in 2012 Co-Principal Investigator	2015-12-30	Final no updates expected
Particulate organic carbon from the formation fluids recovered from the CORKs installed at North Pond; collected on Maria S. Merian cruise MSM20-5 in 2012 Co-Principal Investigator	2015-12-30	Final no updates expected
Net oxygen consumption rates of the fluids recovered from the CORKs installed at North Pond; collected on Maria S. Merian cruise MSM37 in 2014 Co-Principal Investigator	2015-12-29	Final no updates expected
Microbial cell counts derived from the formation fluids recovered from the CORKs installed at North Pond; collected on Maria S. Merian cruises MSM20-5 and MSM37 from 2012-2014 (North Pond Microbes project) Co-Principal Investigator	2015-12-29	Final no updates expected
v6 16S rRNA from IODP boreholes, seawater, and drilling mud at North Pond collected from Maria S. Merian cruise MSM20-5 in 2012 (North Pond Microbes project) Principal Investigator	2015-09-28	Final no updates expected
Total microbial cell densities and 16S rRNA abundance from North Pond from the Maria S. Merian cruise MSM20-5 in 2012 (North Pond Microbes project) Principal Investigator	2015-09-28	Final no updates expected
Scanning Transmission X-Ray Microscopy raw images and spectra for aXis 2000 analysis software packages from the Maria S. Merian from 2012-2014 (North Pond Microbes project) Co-Principal Investigator	2015-09-02	Preliminary and in progress
North Pond Circulation Obviation Retrofit Kit (CORK) dissolved ion concentrations from samples collected using the Medium Volume Bag Sampler (MVBS) system during ROV Jason-II dives on Maria S. Merian in 2012-2014 (North Pond Microbes project) Co-Principal Investigator	2015-09-02	Preliminary and in progress
North Pond CORKs dissolved oxygen concentrations collected during ROV Jason-II dives from Maria S. Merian cruises MSM20-5 and MSM37 from 2012-2014 (North Pond Microbes project) Co-Principal Investigator	2015-04-06

Project: Function, activity, and adaptation of microbial communities in geochemically diverse subseafloor habitats

Dataset	Version Date	Current State
16S rRNA sequence data from venting fluids and microbial mats; collected on R/V Atlantis cruise AT18-08 at the Axial Seamount, Juan de Fuca Ridge in 2011 Principal Investigator	2016-01-27	Final no updates expected
soxB gene sequence data from microbial mats; collected on R/V Atlantis cruise AT18-08 at the Axial Seamount, Juan de Fuca Ridge in 2011 Principal Investigator	2016-01-26	Final no updates expected
Microbial cell abundance and carbon, nitrogen, and sulfur content from venting fluids and microbial mats at Axial Seamount; from R/V Atlantis cruise AT18-08 in the Axial Seamount, Juan de Fuca Ridge in 2011 Principal Investigator	2016-01-21	Final no updates expected
Vent Fluid Sample Information and Fluid Composition from R/V Thomas G. Thompson TN253 in the NE Pacific Ocean, Juan de Fuca Ridge, Axial Seamount from August to September 2010 (AXIAL project) Principal Investigator	2014-05-27	Preliminary and in progress
B12-vehicle dive sample log: dive samples (rock, fluid, biology) from R/V Thomas G. Thompson TN253 in the NE Pacific Ocean, Juan de Fuca Ridge, Axial Seamount from August to September 2010 (AXIAL project) Principal Investigator	2010-10-25	Final no updates expected

Status message

Database

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Julie Huber

Activities reported for Julie Huber: