Dataset: Supplementary Table 4B: Annotations for contigs within transcriptome libraries for the eleven samples that were manually curated for selected metabolic processes

ValidatedFinal no updates expectedDOI: 10.26008/1912/bco-dmo.812997.1Version 1 (2020-06-22)Dataset Type:Other Field Results

Principal Investigator, Contact: Virginia P. Edgcomb (Woods Hole Oceanographic Institution)

BCO-DMO Data Manager: Karen Soenen (Woods Hole Oceanographic Institution)

Program: International Ocean Discovery Program (IODP)

Project: Collaborative Research: Delineating The Microbial Diversity and Cross-domain Interactions in The Uncharted Subseafloor Lower Crust Using Meta-omics and Culturing Approaches (Subseafloor Lower Crust Microbiology)

Abstract

Supplementary Table 4B: Metatranscriptome data summary for cellular activities presented and statistics on sequencing and removal of potential contaminant sequences: Annotations for contigs within transcriptome libraries for the eleven samples that were manually curated for selected metabolic processes. Samples taken on board of the R/V JOIDES Resolution between November 30, 2015 and January 30, 2016.

Cite Dataset

Supplementary Table 4B: Metatranscriptome data summary for cellular activities presented and statistics on sequencing and removal of potential contaminant sequences: Annotations for contigs within transcriptome libraries for the eleven samples that were manually curated for selected metabolic processes. Samples  taken on board of the R/V JOIDES Resolution between November 30, 2015 and January 30, 2016.

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Krogh, A., Larsson, B., von Heijne, G., & Sonnhammer, E. L. . (2001). Predicting transmembrane protein topology with a hidden markov model: application to complete genomes11Edited by F. Cohen. Journal of Molecular Biology, 305(3), 567–580. doi:10.1006/jmbi.2000.4315

Edgcomb, V. (2020) Supplementary Table 4B: Annotations for contigs within transcriptome libraries for the eleven samples that were manually curated for selected metabolic processes. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2020-06-22 [if applicable, indicate subset used]. doi:10.26008/1912/bco-dmo.812997.1 [access date]

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