Dataset: Temperature, Salinity, and Chlorophyll - Spatial Series

Name: Temperature, salinity, and chlorophyll data used for analysis of urchin gut microbiota, Echinometra sp. EZ (Spatial Data Series)
Published: 2021-08-12
Keywords: Echinometra, Gut Microbiota, Persian/Arabian Gulf, Sea Urchin, microbial ecology, oceans

Cite This Dataset

DOI:10.26008/1912/bco-dmo.858398.1

Spatial Extent: N:26.174924 E:56.3635227 S:24.3654999 W:54.1008

Temporal Extent: 2017-08-21 - 2018-02-13

Project:

Dispersal, connectivity and local adaptation along an extreme environmental gradient (Env Gradient Adaptation)

Principal Investigator:

Adam Reitzel (University of North Carolina at Charlotte, UNCC)

Co-Principal Investigator:

John A. Burt (New York University Abu Dhabi, NYUAD)

Scientist:

Edward G. Smith (University of North Carolina at Charlotte, UNCC)

Grace O. Vaughan (New York University Abu Dhabi, NYUAD)

Student:

Noura Al-Mansoori (New York University Abu Dhabi, NYUAD)

Remi Ketchum (University of North Carolina at Charlotte, UNCC)

Technician:

Dain McParland (New York University Abu Dhabi, NYUAD)

BCO-DMO Data Manager:

Shannon Rauch (Woods Hole Oceanographic Institution, WHOI BCO-DMO)

Version:

Version Date:

2021-08-12

Restricted:

Validated:

Yes

Current State:

Final no updates expected

Temperature, salinity, and chlorophyll data used for analysis of urchin gut microbiota, Echinometra sp. EZ (Spatial Data Series)

Abstract:

Temperature, chlorophyll, and salinity data used for the analysis of urchin gut microbiota, Echinometra sp. EZ. Sea surface temperature data were obtained from NOAA. Chlorophyll concentrations were obtained from NASA MODIS AQUA. Salinity data were obtained from a numeric ocean model: the 1/12 Global Hybrid Coordinate Ocean Model.

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Archival Copy

Version Date	Archive	Persistent Identifier (PID)	Date PID Issued
2021-08-12	Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)	10.26008/1912/bco-dmo.858398.1	2021-08-30

Methods & Sampling

The summer-winter spatial series involved six sites along the Arabian Peninsula. We used NOAA’s Environmental Research Division Data Access Program (ERDDAP) website to collect sea surface temperature data. The temperature data was downloaded using a bounding box that covered the study area on the day of collection at 12:00:00 UTC (temperature was averaged over one day).

Chlorophyll concentrations were obtained from MODIS AQUA (https://oceancolor.gsfc.nasa.gov) level 3 monthly averaged data, and salinity data were obtained from a numeric ocean model: the 1/12 Global Hybrid Coordinate Ocean Model (HYCOM; https://www.hycom.org/data/glbu0pt08/expt-91pt2) at 12:00:00 UTC on the day of collections.

Data Processing Description

BCO-DMO Processing:
- changed date format to YYYY-MM-DD;
- renamed fields to comply with BCO-DMO naming conventions.

Data Files

File
spatial_series.csv (Comma Separated Values (.csv), 15.62 KB) MD5:57e20dd2da8e21595dd63ffd8f952b45 Primary data file for dataset ID 858398

More Information about this dataset

Funding Sources

Funding Source	Award Number
NSF Division of Ocean Sciences	OCE-1924498

Deployments

None available yet

Instruments

None available yet

Parameters

Date and time formats are described in python strftime() syntax.

Supplied Name	Supplied description	Supplied Units	Standard Name
sample_id	Sample ID. Format is "month-samplingsite-sample#"	unitless	sample
site	Collection site ID. AA = Al Aqah, AH = Al Fiquet, CG = Musandam, DB = Dibba Rock, DH = Dhabiya, RG = Ras Ghanada	unitless	site
gulf	The Gulf that samples were collected from. PAG is Persian/Arabian Gulf and GO is Gulf of Oman	unitless	site
month	Month of collection	unitless	month
dataset	This study generated two datasets; the temporal series and the summer-winter spatial series.	unitless	datatype
year	Year of collection	unitless	year
Temp_CRW	NOAA’s Environmental Research Division Data Access Program (ERDDAP) website was used to collect sea surface temperature data. The temperature data was downloaded using a bounding box that covered the study area on the day of collection at 12:00:00 UTC (temperature was averaged over one day).	Degrees Celsius	temp
Hycom_Salinity	Salinity data was obtained from a numeric ocean model: the 1/12 Global Hybrid Coordinate Ocean Model (HYCOM; https://www.hycom.org/data/glbu0pt08/expt-91pt2) at 12:00:00 UTC on the day of collections.	PPT	sal
Mon_Ocean_Color_NASA_Chl	Chlorophyll concentrations were obtained from MODIS AQUA (https://oceancolor.gsfc.nasa.gov) level 3 monthly averaged data.	milligrams per cubic meter (mg m-3)	chl_a
Date_Collected	Day of collection in YYYY-MM-DD format (UTC) Format: %Y-%m-%d	unitless	date
Latitude	Latitude of collection site	decimal degrees	lat
Longitude	Longitude of collection site	decimal degrees	lon

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Dataset: Temperature, Salinity, and Chlorophyll - Spatial Series