Dataset: Test dataset created for testing and troubleshooting purposes by Adam

This dataset has not been validatedRelease Date:2023-02-28Data not availableVersion 1 (2024-04-03)Dataset Type:Unknown

Principal Investigator, Co-Principal Investigator: Amber D. York (Woods Hole Oceanographic Institution)

Co-Principal Investigator: Taylor Heyl (Woods Hole Oceanographic Institution)

Co-Principal Investigator: Sawyer Newman (Woods Hole Oceanographic Institution)

Co-Principal Investigator: Karen Soenen (Woods Hole Oceanographic Institution)

Scientist: Shannon Rauch (Woods Hole Oceanographic Institution)

BCO-DMO Data Manager: Dana Stuart Gerlach (Woods Hole Oceanographic Institution)

Project: BCO-DMO: Accelerating Scientific Discovery through Adaptive Data Management (BCO-DMO)

Abstract

Raw data and assembled scaffolds for the Atlantic silverside genome Test text: Ipsum lorep test text Another paragraph with stuff Some italics here

Cite Dataset

DNA extracts from the vicinity of Station ALOHA (22.75 N, 158.0 W) just north of Hawaii.

CMORE RNA and DNA Archive

Goal: The goal of this effort is to provide a time series collection of planktonic microbial DNA and RNA depth profiles from the HOT station, for CMORE research. DNA and RNA samples will be available for researchers to conduct and coordinate taxonomic and functional gene studies, for example using PCR and RT-PCR methods. Where possible, metagenomic datasets will be generated by pyrosequencing for selected profiles, and posted for downloading the blast searching on the MIT-CMORE server (http://genesis2.mit.edu/).

Activity: Collect microbial cell fraction (1.6um prefiltered, >0.22um) from HOT hydrocasts, and extract nucleic acids, for RNA and DNA for downstream analyses by CMORE investigators. Collection depths are 25m, 45m, 75m, 125m, 200m, 500m, 770m and 1000m. Extracted DNA samples will be available for distribution.

Related Datasets

No Related Datasets

Related Publications

Methods
Goldstein, J. I., Newbury, D. E., Michael, J. R., Ritchie, N. W. M., Scott, J. H. J., & Joy, D. C. (2018). Scanning Electron Microscopy and X-Ray Microanalysis. Springer Science + Business Media, LLC, New York. (Third edition) https://doi.org/10.1007/978-1-4939-6676-9

York, A. D., York, A. D., Soenen, K., Newman, S., Heyl, T., Rauch, S. (2024) Test dataset created for testing and troubleshooting purposes by Adam. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2024-04-03 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/885287 [access date]

Terms of Use

This dataset is licensed under Creative Commons Attribution 4.0.


If you wish to use this dataset, it is highly recommended that you contact the original principal investigators (PI). Should the relevant PI be unavailable, please contact BCO-DMO (info@bco-dmo.org) for additional guidance. For general guidance please see the BCO-DMO Terms of Use document.

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Funded by the U.S. National Science Foundation