| Data File(s) | Type | Description | Action |
|---|---|---|---|
928222_v1_zooplankton_in_situ_video_inventory.csv (21.54 KB) | Comma Separated Values (.csv) | Primary data file for dataset ID 928222, version 1 | |
| Supplemental File(s) | Type | Description | Action |
928222_v1_amphipod_hmm.csv (2.02 KB) | Comma Separated Values (.csv) | Data file containing outputs from Hidden Markov Models, which used amphipod swimming trajectories to predict average swimming speeds and transition probabilities between swimming behaviors under different environmental conditions (hypoxic and normoxic) and amphipod size bins (1-2mm, 2-3mm, 3-4mm, and >4mm). | |
928222_v1_amphipod_density.csv (57.73 KB) | Comma Separated Values (.csv) | Data file containing amphipod densities for each amphipod size bin (1-2mm, 2-3mm, 3-4mm, and > 4mm) from in situ videos recorded under a range of environmental conditions (e.g. hypoxic and normoxic). Amphipod densities were determined by calculating the average number of amphipod localization per frame. | |
928222_v1_amphipod_speeds.csv (155.78 KB) | Comma Separated Values (.csv) | Data file containing amphipod swimming metrics, such as the average swimming speed of different behaviors ("darting" and "hovering") and the probability of transitioning between behaviors. Swimming behaviors were extracted from in situ videos recorded under a range of environmental conditions (e.g. hypoxic and normoxic). | |
928222_v1_copepod_hmm.csv (3.17 KB) | Comma Separated Values (.csv) | Data file containing an overview of each in situ video included in this analysis, the environmental conditions the video was recorded under, and the number of copepod swimming trajectories in each video. | |
928222_v1_copecod_hmm.csv (3.17 KB) | Comma Separated Values (.csv) | Data file containing outputs from Hidden Markov Models, which used copepod swimming trajectories to predict average swimming speeds and transition probabilities between swimming behaviors under different environmental conditions (hypoxic and normoxic) and copepod size bins (1-2mm, 2-3mm, 3-4mm, and >4mm). | |
928222_v1_copepod_density.csv (57.87 KB) | Comma Separated Values (.csv) | Data file containing copepod densities for each copepod size bin (1-2mm, 2-3mm, 3-4mm, and > 4mm) from in situ videos recorded under a range of environmental conditions (e.g. hypoxic and normoxic). Copepod densities were determined by calculating the average number of copepod localization per frame. | |
928222_v1_copepod_speeds.csv (267.15 KB) | Comma Separated Values (.csv) | Data file containing copepod swimming metrics, such as the average swimming speed of different behaviors ("drifting," "cruising," and "jumping") and the probability of transitioning between behaviors. Swimming behaviors were extracted from in situ videos recorded under a range of environmental conditions (e.g. hypoxic and normoxic). | |
fps_20 READ ME.txt (4.78 KB) | Plain Text | Text file containing a description of the content and naming structure within the fps_20.zip file. fps_20.zip contains the full frame images, ROI (regions of interest) images, and swimming trajectories used in this analysis. | |
928222_supplemental_data_file_parameters.csv (14.64 KB) | Comma Separated Values (.csv) | This file contains the parameter descriptions and units for Supplemental Data Files: 928222_v1_copepod_metdata.csv, 928222_v1_amphipod_metadata.csv, 928222_v1_copepod_density.csv, 928222_v1_amphipod_density.csv, 928222_v1_copepod_speeds.csv, 928222_v1_amphipod_speeds.csv, 928222_v1_copepod_hhm.csv, and 928222_v1_amphipod_hmm.csv | |
928222_v1_amphipod_metadata.csv (13.01 KB) | Comma Separated Values (.csv) | Data file containing an overview of each in situ video included in this analysis, the environmental conditions the video was recorded under, and the number of amphipod swimming trajectories in each video. | |
928222_v1_copecod_metadata.csv (13.11 KB) | Comma Separated Values (.csv) | Data file containing an overview of each in situ video included in this analysis, the environmental conditions the video was recorded under, and the number of copepod swimming trajectories in each video. | |
928222_v1_copepod_metadata.csv (13.11 KB) | Comma Separated Values (.csv) | Data file containing an overview of each in situ video included in this analysis, the environmental conditions the video was recorded under, and the number of copepod swimming trajectories in each video. |
Files
Filename: 928222_v1_zooplankton_in_situ_video_inventory.csv (21.54 KB)
Type: Comma Separated Values (.csv)
Description: Primary data file for dataset ID 928222, version 1
Type: Comma Separated Values (.csv)
Description: Primary data file for dataset ID 928222, version 1
Supplemental Files
Filename: 928222_v1_amphipod_hmm.csv (2.02 KB)
Type: Comma Separated Values (.csv)
Description: Data file containing outputs from Hidden Markov Models, which used amphipod swimming trajectories to predict average swimming speeds and transition probabilities between swimming behaviors under different environmental conditions (hypoxic and normoxic) and amphipod size bins (1-2mm, 2-3mm, 3-4mm, and >4mm).
Type: Comma Separated Values (.csv)
Description: Data file containing outputs from Hidden Markov Models, which used amphipod swimming trajectories to predict average swimming speeds and transition probabilities between swimming behaviors under different environmental conditions (hypoxic and normoxic) and amphipod size bins (1-2mm, 2-3mm, 3-4mm, and >4mm).
Filename: 928222_v1_amphipod_density.csv (57.73 KB)
Type: Comma Separated Values (.csv)
Description: Data file containing amphipod densities for each amphipod size bin (1-2mm, 2-3mm, 3-4mm, and > 4mm) from in situ videos recorded under a range of environmental conditions (e.g. hypoxic and normoxic). Amphipod densities were determined by calculating the average number of amphipod localization per frame.
Type: Comma Separated Values (.csv)
Description: Data file containing amphipod densities for each amphipod size bin (1-2mm, 2-3mm, 3-4mm, and > 4mm) from in situ videos recorded under a range of environmental conditions (e.g. hypoxic and normoxic). Amphipod densities were determined by calculating the average number of amphipod localization per frame.
Filename: 928222_v1_amphipod_speeds.csv (155.78 KB)
Type: Comma Separated Values (.csv)
Description: Data file containing amphipod swimming metrics, such as the average swimming speed of different behaviors ("darting" and "hovering") and the probability of transitioning between behaviors. Swimming behaviors were extracted from in situ videos recorded under a range of environmental conditions (e.g. hypoxic and normoxic).
Type: Comma Separated Values (.csv)
Description: Data file containing amphipod swimming metrics, such as the average swimming speed of different behaviors ("darting" and "hovering") and the probability of transitioning between behaviors. Swimming behaviors were extracted from in situ videos recorded under a range of environmental conditions (e.g. hypoxic and normoxic).
Filename: 928222_v1_copepod_hmm.csv (3.17 KB)
Type: Comma Separated Values (.csv)
Description: Data file containing an overview of each in situ video included in this analysis, the environmental conditions the video was recorded under, and the number of copepod swimming trajectories in each video.
Type: Comma Separated Values (.csv)
Description: Data file containing an overview of each in situ video included in this analysis, the environmental conditions the video was recorded under, and the number of copepod swimming trajectories in each video.
Filename: 928222_v1_copecod_hmm.csv (3.17 KB)
Type: Comma Separated Values (.csv)
Description: Data file containing outputs from Hidden Markov Models, which used copepod swimming trajectories to predict average swimming speeds and transition probabilities between swimming behaviors under different environmental conditions (hypoxic and normoxic) and copepod size bins (1-2mm, 2-3mm, 3-4mm, and >4mm).
Type: Comma Separated Values (.csv)
Description: Data file containing outputs from Hidden Markov Models, which used copepod swimming trajectories to predict average swimming speeds and transition probabilities between swimming behaviors under different environmental conditions (hypoxic and normoxic) and copepod size bins (1-2mm, 2-3mm, 3-4mm, and >4mm).
Filename: 928222_v1_copepod_density.csv (57.87 KB)
Type: Comma Separated Values (.csv)
Description: Data file containing copepod densities for each copepod size bin (1-2mm, 2-3mm, 3-4mm, and > 4mm) from in situ videos recorded under a range of environmental conditions (e.g. hypoxic and normoxic). Copepod densities were determined by calculating the average number of copepod localization per frame.
Type: Comma Separated Values (.csv)
Description: Data file containing copepod densities for each copepod size bin (1-2mm, 2-3mm, 3-4mm, and > 4mm) from in situ videos recorded under a range of environmental conditions (e.g. hypoxic and normoxic). Copepod densities were determined by calculating the average number of copepod localization per frame.
Filename: 928222_v1_copepod_speeds.csv (267.15 KB)
Type: Comma Separated Values (.csv)
Description: Data file containing copepod swimming metrics, such as the average swimming speed of different behaviors ("drifting," "cruising," and "jumping") and the probability of transitioning between behaviors. Swimming behaviors were extracted from in situ videos recorded under a range of environmental conditions (e.g. hypoxic and normoxic).
Type: Comma Separated Values (.csv)
Description: Data file containing copepod swimming metrics, such as the average swimming speed of different behaviors ("drifting," "cruising," and "jumping") and the probability of transitioning between behaviors. Swimming behaviors were extracted from in situ videos recorded under a range of environmental conditions (e.g. hypoxic and normoxic).
Filename: fps_20 READ ME.txt (4.78 KB)
Type: Plain Text
Description: Text file containing a description of the content and naming structure within the fps_20.zip file. fps_20.zip contains the full frame images, ROI (regions of interest) images, and swimming trajectories used in this analysis.
Type: Plain Text
Description: Text file containing a description of the content and naming structure within the fps_20.zip file. fps_20.zip contains the full frame images, ROI (regions of interest) images, and swimming trajectories used in this analysis.
Filename: 928222_supplemental_data_file_parameters.csv (14.64 KB)
Type: Comma Separated Values (.csv)
Description: This file contains the parameter descriptions and units for Supplemental Data Files: 928222_v1_copepod_metdata.csv, 928222_v1_amphipod_metadata.csv, 928222_v1_copepod_density.csv, 928222_v1_amphipod_density.csv, 928222_v1_copepod_speeds.csv, 928222_v1_amphipod_speeds.csv, 928222_v1_copepod_hhm.csv, and 928222_v1_amphipod_hmm.csv
Type: Comma Separated Values (.csv)
Description: This file contains the parameter descriptions and units for Supplemental Data Files: 928222_v1_copepod_metdata.csv, 928222_v1_amphipod_metadata.csv, 928222_v1_copepod_density.csv, 928222_v1_amphipod_density.csv, 928222_v1_copepod_speeds.csv, 928222_v1_amphipod_speeds.csv, 928222_v1_copepod_hhm.csv, and 928222_v1_amphipod_hmm.csv
Filename: 928222_v1_amphipod_metadata.csv (13.01 KB)
Type: Comma Separated Values (.csv)
Description: Data file containing an overview of each in situ video included in this analysis, the environmental conditions the video was recorded under, and the number of amphipod swimming trajectories in each video.
Type: Comma Separated Values (.csv)
Description: Data file containing an overview of each in situ video included in this analysis, the environmental conditions the video was recorded under, and the number of amphipod swimming trajectories in each video.
Filename: 928222_v1_copecod_metadata.csv (13.11 KB)
Type: Comma Separated Values (.csv)
Description: Data file containing an overview of each in situ video included in this analysis, the environmental conditions the video was recorded under, and the number of copepod swimming trajectories in each video.
Type: Comma Separated Values (.csv)
Description: Data file containing an overview of each in situ video included in this analysis, the environmental conditions the video was recorded under, and the number of copepod swimming trajectories in each video.
Filename: 928222_v1_copepod_metadata.csv (13.11 KB)
Type: Comma Separated Values (.csv)
Description: Data file containing an overview of each in situ video included in this analysis, the environmental conditions the video was recorded under, and the number of copepod swimming trajectories in each video.
Type: Comma Separated Values (.csv)
Description: Data file containing an overview of each in situ video included in this analysis, the environmental conditions the video was recorded under, and the number of copepod swimming trajectories in each video.