Dataset: Bottle-calibrated dissolved oxygen (DO) profiles from US Overturning in the Subpolar North Atlantic Program (OSNAP) cruises in 2020 and 2022 (AR45 and AR69-03)

ValidatedFinal no updates expectedDOI: 10.26008/1912/bco-dmo.933743.1Version 1 (2024-08-30)Dataset Type:Cruise Results

Principal Investigator, Contact: Hilary I. Palevsky (Boston College)

Scientist: Kristen E. Fogaren (Boston College)

BCO-DMO Data Manager: Karen Soenen (Woods Hole Oceanographic Institution)


Project: Collaborative Research: Gases in the Overturning and Horizontal circulation of the Subpolar North Atlantic Program (GOHSNAP) (GOHSNAP)


Abstract

This dataset contains bottle-calibrated dissolved oxygen (DO) profiles collected from Conductivity Temperature Depth (CTD) casts during cruises in 2020 (AR45) and 2022 (AR69-03) to recover and redeploy Overturning in the Subpolar North Atlantic Program (OSNAP) moorings in the Labrador Sea and western Irminger Sea. DO profiles were used in conjunction with oxygen bottle measurements (Winklers) to produce a post-cruise oxygen-calibrated CTD product for scientific use as part of Gases in the Overtu...

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These data were during cruises onboard the R/V Neil Armstrong to recover and redeploy mooring infrastructure of the international Overturning in the Subpolar North Atlantic Program (OSNAP) in 2020 (AR45) and 2022 (AR69-03). The mooring infrastructure maintained on these cruises is located in the eastern Labrador Sea (referred to as the LS line) and western Irminger Sea (referred to as the CF line). Beginning in 2020, the Gases in the Overturning and Horizontal circulation of the Subpolar North Atlantic Program (GOHSNAP) has added moored oxygen sensors to these sections of the OSNAP mooring array. During these cruises, Conductivity Temperature Depth (CTD) casts are conducted to provide data necessary to calibrate the moored sensors (Miller et al., in review), as well as hydrographic data that provide a valuable dataset in and of themselves.

This dataset uses CTD data collected by the OSNAP and GOHSNAP programs during AR45 (OSNAP 22) and AR69-03 (OSNAP 32) cruises, alongside discrete samples collected for this project during the cruises (Related Dataset: Palevsky et al. 2024) to produce calibrated, quality-controlled oxygen depth profiles. For further information on CTD-DO calibration and its role in the calibration of moored oxygen sensors, see Miller et al. (in review).

Data collection 

CTD casts were performed using a ship-provided SeaBird 911plus CTD and deck unit  (http://www.seabird.com//sbe911plus-ctd) configured to measure pressure, temperature, conductivity, oxygen current, and other variables. Rosettes were equipped with primary and secondary pumped CTD sensor packages to measure pressure, temperature, and conductivity in duplicate. A SBE43 dissolved oxygen sensor was integrated into the pumped flow path of the primary CTD sensor package. Sensor data were acquired by an SBE Deck Unit providing demodulated data to a personal computer running SEASAVE (http://www.seabird.com/software/seasavev7) acquisition software. Calibrations for CTD sensors were performed by the manufacturer before the cruise.  

SeaBird processing 

CTD data are processed using SeaBird data processing software. The raw 24 Hz CTD data are converted from HEX to ASCII, lag corrected, edited for large spikes, smoothed according to sensor, and pressure averaged into 2 db bins for final data quality control and analysis. Table 1 summarizes the order in which SeaBird Modules were processed and the inputs applied during each module. 

SeaBird (Version 7.26.7) data processing module inputs 

* DATCNV: Convert the raw data (.hex) to pressure, temperature, conductivity, and dissolved oxygen (V) to a file with a .cnv extension. Use default hysteresis correction
* BOTTLESUM: Writes out a summary of the bottle data to a file with a .btl extension
* ALIGNCTD: Advance Oxygen raw [V] by time determined by processing relative to pressure
* WILDEDIT: Checks for and marks ‘wild’ data points: first pass 2.0 standard deviations; second pass 20 standard deviations 
* CELLTM: Conductivity cell thermal mass correction; alpha = 0.03 and 1/beta = 7.0
* FILTER: Low pass filter pressure and depth (DO [V]) with a time constant of 0.15 seconds to increase pressure resolution for LOOPEDIT
* LOOPEDIT: Mark scans where the CTD is moving less than the minimum velocity (0.25 m/s) or traveling backward due to ship roll
* BINAVG: Average data into 2 db pressure bins to match bottle-calibrated salinity files 
* SPLIT (u or d): Split .cnv file into upcast and downcast files. Files are appended automatically with leading u or d


Related Datasets

IsDerivedFrom

Dataset: https://doi.org/10.7284/141990
Rolling Deck To Repository. (2021). <i>CTD (Conductivity, Temperature, Depth) data collected during research cruise AR45 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Neil Armstrong</i> (Version 1) [Data set]. Rolling Deck to Repository (R2R) Program. https://doi.org/10.7284/141990
IsDerivedFrom

Dataset: https://doi.org/10.7284/153092
Rolling Deck To Repository. (2023). <i>CTD (Conductivity, Temperature, Depth) data collected during research cruise AR69-03 using a SeaBird SBE-911+ instrument system onboard the platform RV Neil Armstrong</i> (Version 1) [Data set]. Rolling Deck to Repository (R2R) Program. https://doi.org/10.7284/153092
IsRelatedTo

Dataset: Discrete sample measurements
Relationship Description: Companion dataset containing discrete bottle samples (Winklers) used for CTD-DO calibration
Palevsky, H. I., Yoder, M., Nicholson, D. P., Fogaren, K. E. (2024) Discrete sample measurements of dissolved oxygen, dissolved inorganic carbon, and total alkalinity from US Overturning in the Subpolar North Atlantic Program (OSNAP) cruises in 2020 and 2022 (AR45 and AR69-03). Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2024-08-30 doi:10.26008/1912/bco-dmo.934025.1
IsRelatedTo

Dataset: https://doi.org/10.35090/gatech/66767
Pickart, R., &amp; McRaven, L. (2022). <i> Conductivity-Temperature-Depth (CTD) data as part of the OSNAP (Overturning in the Subpolar North Atlantic Program), from 2020 on the R/V Neil Armstrong</i> [Data set]. Georgia Institute of Technology. https://doi.org/10.35090/GATECH/66767
IsRelatedTo

Dataset: https://cchdo.ucsd.edu/cruise/33VB20220819
Straneo, F. (2023). CTD data from 33VB20220819 [Dataset]. Retrieved from CCHDO https://cchdo.ucsd.edu/cruise/33VB20220819

Related Publications

Methods

Bittig, H. C., & Körtzinger, A. (2017). Technical note: Update on response times, in-air measurements, and in situ drift for oxygen optodes on profiling platforms. Ocean Science, 13(1), 1–11. https://doi.org/10.5194/os-13-1-2017
Methods

Bittig, H. C., Körtzinger, A., Neill, C., van Ooijen, E., Plant, J. N., Hahn, J., Johnson, K. S., Yang, B., & Emerson, S. R. (2018). Oxygen Optode Sensors: Principle, Characterization, Calibration, and Application in the Ocean. Frontiers in Marine Science, 4. https://doi.org/10.3389/fmars.2017.00429
Methods

Edwards, B., Murphy, D., Janzen, C., & Larson, N. (2010). Calibration, Response, and Hysteresis in Deep-Sea Dissolved Oxygen Measurements. Journal of Atmospheric and Oceanic Technology, 27(5), 920–931. https://doi.org/10.1175/2009jtecho693.1
Methods

Jiang, L.-Q., Pierrot, D., Wanninkhof, R., Feely, R. A., Tilbrook, B., Alin, S., Barbero, L., Byrne, R. H., Carter, B. R., Dickson, A. G., Gattuso, J.-P., Greeley, D., Hoppema, M., Humphreys, M. P., Karstensen, J., Lange, N., Lauvset, S. K., Lewis, E. R., Olsen, A., … Xue, L. (2022). Best Practice Data Standards for Discrete Chemical Oceanographic Observations. Frontiers in Marine Science, 8. https://doi.org/10.3389/fmars.2021.705638
Methods

McDougall, T.J. and P.M. Barker, (2011). Getting started with TEOS-10 and the Gibbs Seawater (GSW) Oceanographic Toolbox, 28pp., SCOR/IAPSO WG127, ISBN 978-0-646-55621-5