Dataset: Processed dissolved oxygen and infauna of experimental chambers and ambient sensors acquired in the shallow subtidal shore-accessible site in Bon Secour Bay, Mobile Bay, Alabama, USA between August 7-12, 2021

This dataset has not been validatedData not availableVersion 1 (2024-10-21)Dataset Type:Other Field Results

Student, Contact: Kara Gadeken (University of South Alabama; and Dauphin Island Sea Lab)

BCO-DMO Data Manager: Karen Soenen (Woods Hole Oceanographic Institution)

Project: CAREER: Mechanisms of bioturbation and ecosystem engineering by benthic infauna (Bioturbation and Ecosystem Engineering)

Abstract

This data set includes data and scripts from a field study examining the effect of diel oxygen cycling on faunal activity, and in turn sediment oxygen demand. The field experiment used in situ flow-through benthic chambers to measure oxygen consumption, as described in the methods paper Gadeken et al 2023 in L&O:Methods. The chambers were deployed and retrieved in three ~24 hour deployments in a shallow subtidal area of Bon Secour Bay in Mobile Bay, AL, in August 2021. Included in this data set ...

Show more
Cite Dataset

Five matlab script files (.m) are added as supplemental files to this dataset. They are for the data analysis and results/figures of the results paper. Some of these are run step-wise. Note that because Chamber 1 malfunctioned in all three deployments, the scripts regularly exclude that chamber in data processing and analyses. Users replicating these methods who have better luck with their chamber 1 will want to add in code modified from analysis of the other chambers to analyze those data.

Related Datasets

IsDerivedFrom
Dataset: In situ dissolved oxygen
Relationship Description: Raw dissolved oxygen data from ambient and chamber dissolved oxygen loggers
(2024) In situ dissolved oxygen of experimental chambers and ambient sensors acquired in the shallow subtidal shore-accessible site in Bon Secour Bay, Mobile Bay, Alabama, USA between August 7-12, 2021. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2024-10-23 http://lod.bco-dmo.org/id/dataset/941205
IsDerivedFrom
Dataset: Infauna abundance and biomass
Relationship Description: Infauna abundance and biomass data per chamber and deployment.
(2024) In situ infauna abundance and biomass of experimental sediment chambers acquired in the shallow subtidal shore-accessible site in Bon Secour Bay, Mobile Bay, Alabama, USA between August 7-12, 2021. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2024-10-22 http://lod.bco-dmo.org/id/dataset/941067

Related Publications

Results
Gadeken, K. J., Lockridge, G., & Dorgan, K. M. (2023). An in situ benthic chamber system for improved temporal and spatial resolution measurement of sediment oxygen demand. Limnology and Oceanography: Methods, 21(11), 645–655. Portico. https://doi.org/10.1002/lom3.10571

Gadeken, K. (2024) Processed dissolved oxygen and infauna of experimental chambers and ambient sensors acquired in the shallow subtidal shore-accessible site in Bon Secour Bay, Mobile Bay, Alabama, USA between August 7-12, 2021. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2024-10-21 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/940735 [access date]

Terms of Use

This dataset is licensed under Creative Commons Attribution 4.0.


If you wish to use this dataset, it is highly recommended that you contact the original principal investigators (PI). Should the relevant PI be unavailable, please contact BCO-DMO (info@bco-dmo.org) for additional guidance. For general guidance please see the BCO-DMO Terms of Use document.

NSF Logo©2020 Biological and Chemical Oceanography Data Management Office.
Funded by the U.S. National Science Foundation