Project: Marine Microbial Investigator Award: Investigator Mak Saito

Acronym/Short Name:

MM Saito

Start Date:

2013-05

End Date:

2019-12

Programs:

Marine Microbiology Initiative [MMI]

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Description

In support of obtaining deeper knowledge of major biogeochemically relevant proteins to inform a mechanistic understanding of global marine biogeochemical cycles.

More Information

Funding

Funding Source	Award Number
Gordon and Betty Moore Foundation: Marine Microbiology Initiative	GBMF3782

Dataset Collections

Dataset Short Name	Full Dataset Title
Diel proteomes Trichodesmium IMS101	Diel proteomes of cultured Trichodesmium erythraeum sp. IMS101 from laboratory experiments conducted in November of 2018
Growth rates of Line P diatoms in added Zn and Co incubation studies	Growth rates NE Pacific and Atlantic diatom isolates under various Zn and Co additions in experiments with cultures collected from R/V Thomas G. Thompson cruise TN280, along Line P in the NE Pacific, in May of 2012.
Growth rates of the polar diatom Chaetoceros RS19 in +Zn and +Co incubation studies	Growth rates of the polar diatom Chaetoceros RS19 under various +Zn and +Co conditions from September 2019 (MM Saito project)
Metal quotas (ratios of Metal:P) of Chaetoceros sp. RS19 in +Zn and +Co incubation studies	Metal quotas (ratios of Metal:P) of the polar diatom Chaetoceros sp. RS19 in +Zn and +Co incubation studies from January 2020 (MM Saito project)
Metal quotas of Line P diatoms in added Zn and Co incubation studies	Metal quotas of NE Pacific and Altantic diatom isolates measured via ICP-MS after growth in zinc and cobalt media amendments in experiments with cultures collected from R/V Thomas G. Thompson cruise TN280, along Line P in the NE Pacific, in May of 2012
Metal uptake rates of the polar diatom Chaetoceros RS19 in +Zn and +Co incubation studies	Metal uptake rates of the polar diatom Chaetoceros RS19 in +Zn and +Co incubation studies from January 2020 (MM Saito project)
Pacific Nitrite Oxidoreductase	Nitrite Oxidoreductase targeted metaproteomics from R/V Kilo Moana cruise KM1128 and R/V Falkor cruise FK160115 in the Central Pacific Ocean in 2011 and 2016
ProteOMZ Exclusive Peptide Level Spectral Counts	Relative protein abundance from scaled and corrected exclusive peptide spectral counts from the ProteOMZ R/V Falkor expedition cruise FK160115 in the Pelagic central Pacific Ocean in 2016
Trichodesmiium field metaproteomes - sample provenance	Trichodesmium sample provenance from samples collected in North Atlantic surface waters, station BATS, and station ALOHA between 2000 and 2018
Trichodesmium field metaproteomes - peptide spectral counts	Net tow metaproteoome of Trichodesmium species mapped to a Trichodesmium metagenome plus cyanoGEBA species genomes in units of normalized peptide spectral counts from samples collected in the Atlantic and Pacific Ocean between 2000 and 2018
Trichodesmium field metaproteomes - protein spectral counts	Net tow metaproteome of Trichodesmium species mapped to a Trichodesmium metagenome plus cyanoGEBA species genomes in units of normalized protein spectral counts from samples collected in the Atlantic and Pacific Ocean between 2000 and 2018
Trichodesmium field metaproteomes - protein spectral counts in alternative format	Metaproteomes of Trichodesmium from samples collected in North Atlantic surface waters, station BATS, and station ALOHA between 2000 and 2018
Trichodesmium field metaproteomes - sequence fasta	FASTA file of sequences in Trichodesmium field metaproteomes mapped to a Trichodesmium metagenome plus cyanoGEBA species genomes from samples collected in the Atlantic and Pacific Ocean between 2000 and 2018
Trichodesmium field metaproteomes - single colony metaproteomes	Single colony metaproteomes of Trichodesmium from samples collected in North Atlantic surface waters during the R/V Atlantis cruise AT39-05 in March of 2018

Deployments

Total: 5

Cruise/Deployment	Platform Type	Start Date	Chief/Co-chief Scientist
AT39-05	vessel	11 Feb 2018	David A. Hutchins
FK160115	vessel	16 Jan 2016	Mak A. Saito
JC150	vessel	26 Jun 2017	Claire Mahaffey
KM1128	vessel	01 Oct 2011	Carl Lamborg Mak A. Saito
TN280	vessel	16 May 2012	E. Virginia Armbrust

Project Coordinators

Person	Roles	Affiliation
Mak A. Saito	Principal Investigator	Woods Hole Oceanographic Institution (WHOI)

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Project: Marine Microbial Investigator Award: Investigator Mak Saito