Petra H. Lenz

Affiliation:

Address:

Pacific Biosciences Research Center (PBRC), Bekesy Laboratory of Neurobiology
1993 East-West Road
Honolulu, HI
United States 96822

ORCiD:

0000-0002-2460-5464

Activities reported for Petra H. Lenz:

Program coordination

None

Project coordination

EAGER: New molecular methods for studying copepod nauplii in the field (EAGER: Copepod nauplii)	Co-Principal Investigator
Application of transcriptomics to investigate organism-environment relationships in marine zooplankton (CFINTRANSCRIPT)	Principal Investigator, Contact
Collaborative Proposal: Optimizing Recruitment of Neocalanus copepods through Strategic Timing of Reproduction and Growth in the Gulf of Alaska (Neocalanus Gulf of Alaska)	Principal Investigator
The Drive to Survive: Copepods vs Ichthyoplankton (PreyEscape)	Principal Investigator, Contact
Collaborative Research: Zooplankton restarts in a high-latitude marine ecosystem: species-specific recruitment and development in early spring (Zooplankton recruitment)	Lead Principal Investigator, Contact

Deployment coordination

Deployment	Platform	Role
CopepodEscape_2017	Lenz_lab	Principal Investigator
GoME_2008-2011	Lenz_lab	Principal Investigator
Lenz_Gulf_of_Alaska_2019-04-15	M/V Dora	Principal Investigator
Naup_2015	Lenz_lab	Principal Investigator
PredatorSuccess_2016	Lenz_lab	Principal Investigator

Datasets

Project: Collaborative Research: Molecular profiling of the ecophysiology of dormancy induction in calanid copepods of the Northern Gulf of Alaska LTER site

Dataset	Version Date	Current State
Multiyear RNA-Seq of Neocalanus flemingeri stages CV and Adult Female from the R/V Tiglax and R/V Sikuliaq in the Northern Gulf of Alaska from 2015-2022 Principal Investigator	2024-07-16	Preliminary and in progress
Gene expression profiles for Neocalanus flemingeri pre adults (CV) exposed to four different experimental food conditions collected from the M/V Dora in the Gulf of Alaska at station GAK1 from April 2019 Principal Investigator, Contact	2024-05-30	Final no updates expected
Annotated de novo transcriptomes generated from six co-occurring species of calanoid copepods from the R/V Tiglax TXF18, TXS19, TXF15, TXF17 in the Gulf of Alaska from 2015-2019 Scientist, Contact	2024-07-02	Final no updates expected
Oocytes formation in post-diapause Neocalanus flemingeri females from the R/V Sikuliaq and the R/V Tiglax in the Northern Gulf of Alaska from 2019-06-30 to 2019-09-13 Principal Investigator, Contact	2024-06-13	Final no updates expected
Post-diapause Neocalanus flemingeri females morphometric measurements and calculations of lipid fullness and lipid volume taken from the R/V Sikuliaq and the R/V Tiglax in the Northern Gulf of Alaska from 2019-06-30 to 2019-09-13 Principal Investigator, Contact	2024-06-13	Final no updates expected

Project: The Drive to Survive: Copepods vs Ichthyoplankton

Dataset	Version Date	Current State
Quantification of a previously undescribed fast-start of larval clownfish targeting copepod prey: predatory posture, speed and acceleration from high-speed video, July 2015 Principal Investigator	2018-11-28	Final no updates expected
High-speed videos of larval clownfish, Amphiprion ocellaris, predators and copepod prey Principal Investigator	2018-11-26	Final no updates expected
Experimental results on the speed of escape for five species of calanoid copepod and multiple developmental stages in response to artificial hydrodynamic stimuli (PreyEscape project) Principal Investigator	2017-04-12	Final no updates expected
Experimental results on the direction of escape for five species of calanoid copepod and multiple developmental stages in response to artificial hydrodynamic stimuli (PreyEscape project) Principal Investigator	2017-04-04	Final no updates expected
Larval clownfish (Amphiprion ocellaris) predatory success during first 14 days post-hatch from Lenz lab in the University of Hawaii at Manoa lab from 2012-2015 (PreyEscape project) Principal Investigator	2017-04-04	Final no updates expected
Growth of larval clownfish, Amphiprion ocellaris used in predator-prey experiment (PreyEscape project) Principal Investigator	2017-04-04	Final no updates expected
Copepod nauplius appendage measurements collected during escape response University of Hawaii at Manoa in 2015 (PreyEscape project) Principal Investigator	2015-12-15	Final no updates expected

Project: Collaborative Proposal: Optimizing Recruitment of Neocalanus copepods through Strategic Timing of Reproduction and Growth in the Gulf of Alaska

Dataset	Version Date	Current State
Multiyear RNA-Seq of Neocalanus flemingeri stages CV and Adult Female from the R/V Tiglax and R/V Sikuliaq in the Northern Gulf of Alaska from 2015-2022 Principal Investigator	2024-07-16	Preliminary and in progress
Annotated de novo transcriptomes generated from six co-occurring species of calanoid copepods from the R/V Tiglax TXF18, TXS19, TXF15, TXF17 in the Gulf of Alaska from 2015-2019 Scientist, Contact	2024-07-02	Final no updates expected
Oocytes formation in post-diapause Neocalanus flemingeri females from the R/V Sikuliaq and the R/V Tiglax in the Northern Gulf of Alaska from 2019-06-30 to 2019-09-13 Principal Investigator, Contact	2024-06-13	Final no updates expected
Post-diapause Neocalanus flemingeri females morphometric measurements and calculations of lipid fullness and lipid volume taken from the R/V Sikuliaq and the R/V Tiglax in the Northern Gulf of Alaska from 2019-06-30 to 2019-09-13 Principal Investigator, Contact	2024-06-13	Final no updates expected
Neocalanus distribution, mean length, mean weight, abundance and biomass from the Gulf of Alaska , Fall 2015, 2016 and 2017 Co-Principal Investigator	2024-05-10	Final no updates expected
Neocalanus copepod egg production is described from the Northern Gulf of Alaska for Fall 2015, 2016, 2017 Co-Principal Investigator	2021-11-08	Final no updates expected
RNA-Seq sample information and accessions numbers for the copepods Neocalanus flemingeri (Prince William Sound, Gulf of Alaska)(2015-2017) and Labidocera madurae (Kane‘ohe Bay, Oahu, Hawaii)(2017) Principal Investigator	2020-12-11	Under revision

Project: Application of transcriptomics to investigate organism-environment relationships in marine zooplankton

Dataset	Version Date	Current State
Links to a microarray and transcriptome for C. finmarchicus in the Gulf of Maine from 2008-2011 (CFINTRANSCRIPT project) Principal Investigator	2017-12-06	Final no updates expected

Project: EAGER: New molecular methods for studying copepod nauplii in the field

Dataset	Version Date	Current State
Measurements of mixed field samples used for qPCR estimates and estimating biomass of DNA copy number in bulk samples Co-Principal Investigator	2022-02-03	Final no updates expected
Measurements of individual body size and qPCR estimates of DNA copy number per individual from the development of four assays to quantify copeod naupliar biomass in Kaneohe Bay, Hawaii Co-Principal Investigator	2022-02-02	Final no updates expected
Data resulting from testing dilution experiments conducted in the development of four assays to quantify copeod naupliar biomass in Kaneohe Bay, Hawaii Co-Principal Investigator	2022-02-01	Final no updates expected
Flow cytometry results for naupliar grazing laboratory experiments conducted from 2012-2013 (EAGER: Copepod nauplii project) Co-Principal Investigator	2016-02-04	Final no updates expected
Field conditions during grazing experiments in Kaneohe Bay, HI during 2012-2013 (EAGER: Copepod nauplii project) Co-Principal Investigator	2016-02-02	Final no updates expected
Metadata for field dilution experiments to measure community microzooplankton grazing rates in Kaneohe Bay, HI from 2012-2013 (EAGER: Copepod nauplii project) Co-Principal Investigator	2016-02-04	Final no updates expected

Status message

Database

Contribute Data

Petra H. Lenz

Activities reported for Petra H. Lenz: