Dataset: Temperature Data From Tomales Bay and Bodega Harbor

Name: Temperature data recorded using HOBO Pendant MX2201 loggers deployed at 14 sites in Tomales Bay and Bodega Harbor during August 2019
Published: 2024-04-09
Keywords: seagrass, temperature, California, oceans

Cite This Dataset

DOI:10.26008/1912/bco-dmo.924671.1

Spatial Extent: N:38.3334 E:-122.846 S:38.105 W:-123.06

Tomales Bay and Bodega Harbor in California

Temporal Extent: 2019-08-16 - 2019-08-29

Project:

Using genomics to link traits to ecosystem function in the eelgrass Zostera marina (ZosteraEcoGenomics)

Principal Investigator:

John J. Stachowicz (University of California-Davis, UC Davis)

BCO-DMO Data Manager:

Shannon Rauch (Woods Hole Oceanographic Institution, WHOI BCO-DMO)

Version:

Version Date:

2024-04-09

Restricted:

Validated:

Yes

Current State:

Final no updates expected

Temperature data recorded using HOBO Pendant MX2201 loggers deployed at 14 sites in Tomales Bay and Bodega Harbor during August 2019

Abstract:

To record water temperature, we deployed HOBO Pendant MX2201 loggers (fastened to PVC pipe) in the area from the 14 sites in Tomales and Bodega Harbors from which we collected genetic samples. The pipe was driven into the sediment until the logger was approximately <15 centimeters (cm) above the sediment surface, positioned to rarely be emersed except during low spring tides. We recorded water temperature at 15-minute intervals during a two-week period at all sites from 16 August to 29 August in 2019.

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Archival Copy

Version Date	Archive	Persistent Identifier (PID)	Date PID Issued
2024-04-09	Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)	10.26008/1912/bco-dmo.924671.1	2024-07-02

Methods & Sampling

To record water temperature, we deployed HOBO Pendant MX2201 loggers (fastened to PVC pipe) in the area at each of the sites from which we collected genetic samples. The pipe was driven into the sediment until the logger was approximately <15 centimeters above the sediment surface, positioned to rarely be emersed except during low spring tides. We recorded water temperature at 15-minute intervals during a two-week period at all sites from 16 August to 29 August in 2019.

BCO-DMO Processing

- Added column "Site" to the "Metadata" sheet of original file "temperature_data_shared_dates.xlsx" to create a site list.
- Imported both sheets of original file "temperature_data_shared_dates.xlsx" into the BCO-DMO system.
- Used 'Unpivot' processor to create a column for Site name.
- Joined the site latitude and longitude from the site list to the primary data file.
- Corrected typo in one site name (changed "Beachg" to "Beach" in "Doran Beach").
- Converted the local date/time field to ISO8601 format.
- Created a second column for date/time in UTC time zone.
- Sorted data by site name, then date/time.
- Saved the final file as "924671_v1_tomales_bodega_temp.csv".

Data Files

File
924671_v1_tomales_bodega_temp.csv (Comma Separated Values (.csv), 1.32 MB) MD5:5734274fa996ba421b08ef66b8c99214 Primary data file for dataset ID 924671, version 1

More Information about this dataset

Funding Sources

Funding Source	Award Number
NSF Division of Ocean Sciences	OCE-1829976

Deployments

None available yet

Instruments

Onset HOBO Pendant MX2201 temperature logger

Supplied Name: HOBO Pendant MX2201 loggers (Onset, Bourne MA)

Supplied Description:

Instrument Type

Generic Name: Onset HOBO Pendant MX2201 temperature logger

Acronym: Onset HOBO Pendant MX2201

Generic Description:

The Onset HOBO MX2201 is an in-situ instrument for wet or underwater applications. It supports soil temperature, temperature, and water temperature. A one-channel logger that records up to approximately 96,000 measurements or internal logger events with 8K bytes memory. It has a polypropylene housing case. Uses Bluetooth to transmit data. Can be used with a solar radiation shield. Measurement range: -20 deg C to 70 deg C. Accuracy: +/- 0.50 deg C from 0 deg C to 50 deg C. Water depth rating: 30.5 m

Parameters

Date and time formats are described in python strftime() syntax.

Supplied Name	Supplied description	Supplied Units	Standard Name
site	Name of the sampling site	unitless	site
Latitude	Latitude of the sampling site	decimal degrees	lat
Longitude	Longitude of the sampling site	decimal degrees	lon
ISO_DateTime_PDT	Date and time (PDT) in ISO 8601 format Format: %Y-%m-%dT%H:%M	unitless	ISO_DateTime_Local
ISO_DateTime_UTC	Date and time (UTC) in ISO 8601 format Format: %Y-%m-%dT%H:%MZ	unitless	ISO_DateTime_UTC
temp	Temperature	degrees Celsius	temp